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The map label for this gene is 108759942

Identifier: 108759942

GI number: 108759942

Start: 1776264

End: 1777031

Strand: Reverse

Name: 108759942

Synonym: MXAN_1514

Alternate gene names: NA

Gene position: 1777031-1776264 (Counterclockwise)

Preceding gene: 108758910

Following gene: 108762550

Centisome position: 19.44

GC content: 70.44

Gene sequence:

>768_bases
TTGCCCACCCCGCCCCACATCCTCCCTGCCCCCATCGATATGTCCGCGCCGGACACACGTTCTGGGGACACCGGGGAGCA
GGCGTGCTCCCCGGACGCCTCTGAGCGACGGGAAGACGGCATGAGTGCAGCCGTGCAGGGCCTGCGGATGACGACGCTGC
GATTGTCAAAGGAAGCCGACGAGCCAGCCGAGGCGACGGCGCCCGGGGAGGATGAAGCCCTCCTCGCGCGGCGCGCCCTG
ACGGGTGAGAGGGCGGCCTGGGACGCGCTGGTCGCACGCCATCACCGGCGGGTCGTGGTATCGCTGCTCGCACGTGGCGT
CCGGGTGGACCGGGCGCAAGAGCTGGCCCAGGAGACCTGGGCGCGGCTCATCCAGCAACAGCAGCGCGGGCTGCTGACGG
AGCTTCGCCTGCCCAACCTCGCCCTCACCCAGGCGGCCTTCCTGGCCGCGGACGACGCACGACGGGCCCGTCGCGAGTCC
ATTGCCGGGGCGGTGGATGAACTGCCGGAGCGTCACCACCCGGTGGACCCGTCCGTGTCCGCGGAGCGGCGCCTGCTGAC
CGAGGAGCAACTCTCCCGCGCACATGCTGCGCTGGCGCAGGTGTCTCCCAGCGCACGAAACGTCTTCCTCCTGGCCTGTG
ACGGCCAGGAGCTCCCTCATGCCGCAATCGCCTCACGCGTTGGCCTGTCGGTCCAGCGCGTGCGGCAAATCCTGTGCGAG
GTCCGCAAGAAGCTGCGCACCGCGCTCGAGGAGGAAACCCATGCTTAA

Upstream 100 bases:

>100_bases
GTACGACGGTGAAGGCCGTGTGTGCGGCCGCTGCCAGGGCGTGGTGAAGCTCTCCAACCTCCGCTGGGCGTCGGGAGACA
GTCCCGCAGTCAACTGACCC

Downstream 100 bases:

>100_bases
GCCCCACCTCACCCGCGACTCCGCGGAGCAGTACGTCCTGGGGGCGCTGGCACCGGAGAAGGCCGCGAGCCTCGAGGCGC
ACACGCTGGAATGTGAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPTPPHILPAPIDMSAPDTRSGDTGEQACSPDASERREDGMSAAVQGLRMTTLRLSKEADEPAEATAPGEDEALLARRAL
TGERAAWDALVARHHRRVVVSLLARGVRVDRAQELAQETWARLIQQQQRGLLTELRLPNLALTQAAFLAADDARRARRES
IAGAVDELPERHHPVDPSVSAERRLLTEEQLSRAHAALAQVSPSARNVFLLACDGQELPHAAIASRVGLSVQRVRQILCE
VRKKLRTALEEETHA

Sequences:

>Translated_255_residues
MPTPPHILPAPIDMSAPDTRSGDTGEQACSPDASERREDGMSAAVQGLRMTTLRLSKEADEPAEATAPGEDEALLARRAL
TGERAAWDALVARHHRRVVVSLLARGVRVDRAQELAQETWARLIQQQQRGLLTELRLPNLALTQAAFLAADDARRARRES
IAGAVDELPERHHPVDPSVSAERRLLTEEQLSRAHAALAQVSPSARNVFLLACDGQELPHAAIASRVGLSVQRVRQILCE
VRKKLRTALEEETHA
>Mature_254_residues
PTPPHILPAPIDMSAPDTRSGDTGEQACSPDASERREDGMSAAVQGLRMTTLRLSKEADEPAEATAPGEDEALLARRALT
GERAAWDALVARHHRRVVVSLLARGVRVDRAQELAQETWARLIQQQQRGLLTELRLPNLALTQAAFLAADDARRARRESI
AGAVDELPERHHPVDPSVSAERRLLTEEQLSRAHAALAQVSPSARNVFLLACDGQELPHAAIASRVGLSVQRVRQILCEV
RKKLRTALEEETHA

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27909; Mature: 27778

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPPHILPAPIDMSAPDTRSGDTGEQACSPDASERREDGMSAAVQGLRMTTLRLSKEAD
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPAEATAPGEDEALLARRALTGERAAWDALVARHHRRVVVSLLARGVRVDRAQELAQETW
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ARLIQQQQRGLLTELRLPNLALTQAAFLAADDARRARRESIAGAVDELPERHHPVDPSVS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AERRLLTEEQLSRAHAALAQVSPSARNVFLLACDGQELPHAAIASRVGLSVQRVRQILCE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH
VRKKLRTALEEETHA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
PTPPHILPAPIDMSAPDTRSGDTGEQACSPDASERREDGMSAAVQGLRMTTLRLSKEAD
CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
EPAEATAPGEDEALLARRALTGERAAWDALVARHHRRVVVSLLARGVRVDRAQELAQETW
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ARLIQQQQRGLLTELRLPNLALTQAAFLAADDARRARRESIAGAVDELPERHHPVDPSVS
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AERRLLTEEQLSRAHAALAQVSPSARNVFLLACDGQELPHAAIASRVGLSVQRVRQILCE
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHH
VRKKLRTALEEETHA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA