| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is purH
Identifier: 108759861
GI number: 108759861
Start: 3411223
End: 3412767
Strand: Direct
Name: purH
Synonym: MXAN_2914
Alternate gene names: 108759861
Gene position: 3411223-3412767 (Clockwise)
Preceding gene: 108762633
Following gene: 108762465
Centisome position: 37.32
GC content: 70.23
Gene sequence:
>1545_bases GTGCTGGCTCTCCTGAGCGTTTCTGATAAGCGAGGTCTGGTTCCCTTCGCCCAGGGGCTCGTCCGCCTGGGCTTCCGGTT GTTGTCCACCGGGGGCACGCTGGAGGCGCTCAAGGGCGCGGGGGTGCCCGTCAACAAGGTGTCCGAGCACACGCAGAGCC CCGAGATTCTGGGTGGCCGCGTGAAGACGCTCCACCCCCGCATCCACGGCGGCATCCTGGGACGGCTGGAGCTGGAGGCC GACCGGGAGGAGATGAAGGCGCACGGCATCGAGCCCATCTCCCTGGTCGCGGTGAACCTGTATCCATTCCGGCAGACGGT GGCCTCGGGCGCCGCGGAGCCGGAGGTCATCGAGCAGATTGATATCGGCGGGCCCGCGATGGTGCGCGCCTCCGCGAAGA ACTTCCGGCACGTCTCGGTGGTGGTGGACCCGGACGACTATCCGGCGGTGCTGGCGGAGCTGGAGCAGCAGAAGGCGGTG AGCGAGGACACGCGGCGCCGGCTGATGCGCAAGGCCTTCGCGCACACGGCGGCCTACGACGCCTCCATCTCCGCGTGGCT GTCCGCGCAGGCGGGCGAGCCGTTCCCGGGGGAGCTGTCGTTGGCGTTCCAGAAGTCGCAGGACCTGCGCTACGGGGAGA ACCCGCATCAGCGCGGCGCCTTCTACCGCGAGCACGCCGCGCCCCAGGAGCCGACGGTCGCCTTCGCCAAGGTGCTGCAG GGCAAGGAGCTGTCGTACAACAACATCCTGGACCTGGACGCGGCGCTGGGCCTGCTGCTGGAGTTCCCGGAGGCCCCCGC GGCCGTCATCATCAAGCACAACACGCCCTGCGGCGTGGCGGTGGACGCCGCCTTGGTGAAGGCCTACCGCACGGCCCGCG CGGTGGACGAGGTCTCCGCCTTCGGGGGCATCGTCGCGCTCAACCGCGAGGTGGACGCGGCCACGGCCCAGGCCATGGCG GAGACGTTCCTGGAGGCGGTCATCGCGCCGTCGTACTCCCCGGAGGCGTTGCAGGTGCTGGCGACGAAGAAGAACCTGCG GCTCCTGGAGGCGGGCCCCGCGTTGGCCAGTCCCCAGGCCCGGCCGCGTGCCCAACTGGACGCTCGCAGCGTGTCCGGGG GCATGCTGCTGATGGACCGGGACTCGGTGGAGCCGCCGCTGTCGTGGAAGGTGGTCTCCAAGCGGGCTCCCACGCCGGAG GAGGAGCAGGCCATGCGCTTCGCCTGGAAGGTGTGCAAACACGTCAAGAGCAACGCCATCGTCTTCGCCTCCGGTGACCA GCTCCTGGCGCAGGGCGGGGGGCAGACGAACCGGGTGGATTCGGTCCGCATCGCGATGCAGCGCGGCGGAGCGGCCCTCA GGGGCAGCGCGGTGGCCTCGGACGCCTTCTTCCCGTTCCGGGATGGGCTGGACGAGGCCGCCCGGGCGGGGGCCACCTGT GTCGTACAACCCGGCGGTTCGGTCCGTGACGCGGAGTTGATTGCCGCCGCGGATGAACATGGGATGGCCATGGTGCTGAC GGGAGTGCGACACTTCCGGCACTGA
Upstream 100 bases:
>100_bases GCGGGTGGTTTCCACCCGCAAACGGAGGGCCGACGTGTTGCGTTGACACCCCAGGGGGTGGTTGCTACTACCGCCGCTTC CCGCACACCGAGGCCCACAC
Downstream 100 bases:
>100_bases GCCATGCGCATCGTCTGTCAGAAATGCGCGGCCGCCTACGCGATTGATGACAAGCTCATCACCGCCAAGGGCGTTCGCGC GCAGTGTCCTCGCTGCCGGA
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MLALLSVSDKRGLVPFAQGLVRLGFRLLSTGGTLEALKGAGVPVNKVSEHTQSPEILGGRVKTLHPRIHGGILGRLELEA DREEMKAHGIEPISLVAVNLYPFRQTVASGAAEPEVIEQIDIGGPAMVRASAKNFRHVSVVVDPDDYPAVLAELEQQKAV SEDTRRRLMRKAFAHTAAYDASISAWLSAQAGEPFPGELSLAFQKSQDLRYGENPHQRGAFYREHAAPQEPTVAFAKVLQ GKELSYNNILDLDAALGLLLEFPEAPAAVIIKHNTPCGVAVDAALVKAYRTARAVDEVSAFGGIVALNREVDAATAQAMA ETFLEAVIAPSYSPEALQVLATKKNLRLLEAGPALASPQARPRAQLDARSVSGGMLLMDRDSVEPPLSWKVVSKRAPTPE EEQAMRFAWKVCKHVKSNAIVFASGDQLLAQGGGQTNRVDSVRIAMQRGGAALRGSAVASDAFFPFRDGLDEAARAGATC VVQPGGSVRDAELIAAADEHGMAMVLTGVRHFRH
Sequences:
>Translated_514_residues MLALLSVSDKRGLVPFAQGLVRLGFRLLSTGGTLEALKGAGVPVNKVSEHTQSPEILGGRVKTLHPRIHGGILGRLELEA DREEMKAHGIEPISLVAVNLYPFRQTVASGAAEPEVIEQIDIGGPAMVRASAKNFRHVSVVVDPDDYPAVLAELEQQKAV SEDTRRRLMRKAFAHTAAYDASISAWLSAQAGEPFPGELSLAFQKSQDLRYGENPHQRGAFYREHAAPQEPTVAFAKVLQ GKELSYNNILDLDAALGLLLEFPEAPAAVIIKHNTPCGVAVDAALVKAYRTARAVDEVSAFGGIVALNREVDAATAQAMA ETFLEAVIAPSYSPEALQVLATKKNLRLLEAGPALASPQARPRAQLDARSVSGGMLLMDRDSVEPPLSWKVVSKRAPTPE EEQAMRFAWKVCKHVKSNAIVFASGDQLLAQGGGQTNRVDSVRIAMQRGGAALRGSAVASDAFFPFRDGLDEAARAGATC VVQPGGSVRDAELIAAADEHGMAMVLTGVRHFRH >Mature_514_residues MLALLSVSDKRGLVPFAQGLVRLGFRLLSTGGTLEALKGAGVPVNKVSEHTQSPEILGGRVKTLHPRIHGGILGRLELEA DREEMKAHGIEPISLVAVNLYPFRQTVASGAAEPEVIEQIDIGGPAMVRASAKNFRHVSVVVDPDDYPAVLAELEQQKAV SEDTRRRLMRKAFAHTAAYDASISAWLSAQAGEPFPGELSLAFQKSQDLRYGENPHQRGAFYREHAAPQEPTVAFAKVLQ GKELSYNNILDLDAALGLLLEFPEAPAAVIIKHNTPCGVAVDAALVKAYRTARAVDEVSAFGGIVALNREVDAATAQAMA ETFLEAVIAPSYSPEALQVLATKKNLRLLEAGPALASPQARPRAQLDARSVSGGMLLMDRDSVEPPLSWKVVSKRAPTPE EEQAMRFAWKVCKHVKSNAIVFASGDQLLAQGGGQTNRVDSVRIAMQRGGAALRGSAVASDAFFPFRDGLDEAARAGATC VVQPGGSVRDAELIAAADEHGMAMVLTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family
Homologues:
Organism=Homo sapiens, GI20127454, Length=476, Percent_Identity=38.4453781512605, Blast_Score=254, Evalue=1e-67, Organism=Escherichia coli, GI1790439, Length=530, Percent_Identity=50.7547169811321, Blast_Score=483, Evalue=1e-137, Organism=Caenorhabditis elegans, GI71985564, Length=474, Percent_Identity=35.4430379746835, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI71985574, Length=309, Percent_Identity=28.8025889967638, Blast_Score=85, Evalue=9e-17, Organism=Caenorhabditis elegans, GI71985556, Length=60, Percent_Identity=50, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323056, Length=471, Percent_Identity=38.4288747346072, Blast_Score=273, Evalue=4e-74, Organism=Saccharomyces cerevisiae, GI6323768, Length=471, Percent_Identity=37.5796178343949, Blast_Score=265, Evalue=1e-71, Organism=Drosophila melanogaster, GI24649832, Length=480, Percent_Identity=37.0833333333333, Blast_Score=256, Evalue=2e-68,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PUR9_MYXXD (Q1D898)
Other databases:
- EMBL: CP000113 - RefSeq: YP_631125.1 - ProteinModelPortal: Q1D898 - SMR: Q1D898 - STRING: Q1D898 - GeneID: 4101505 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_2914 - TIGR: MXAN_2914 - eggNOG: COG0138 - HOGENOM: HBG498048 - OMA: ASDGFFP - PhylomeDB: Q1D898 - ProtClustDB: PRK00881 - BioCyc: MXAN246197:MXAN_2914-MONOMER - HAMAP: MF_00139 - InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 - Gene3D: G3DSA:3.40.50.1380 - PANTHER: PTHR11692 - PIRSF: PIRSF000414 - SMART: SM00798 - SMART: SM00851 - TIGRFAMs: TIGR00355
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS; SSF53927 Cytidine_deaminase-like; SSF52335 MGS-like_dom
EC number: =2.1.2.3; =3.5.4.10
Molecular weight: Translated: 54953; Mature: 54953
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALLSVSDKRGLVPFAQGLVRLGFRLLSTGGTLEALKGAGVPVNKVSEHTQSPEILGGR CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHCCCCHHHCCC VKTLHPRIHGGILGRLELEADREEMKAHGIEPISLVAVNLYPFRQTVASGAAEPEVIEQI CEEECCHHCCCEEEEEEECCCHHHHHHCCCCCEEEEEEEEHHHHHHHHCCCCCCHHHHHH DIGGPAMVRASAKNFRHVSVVVDPDDYPAVLAELEQQKAVSEDTRRRLMRKAFAHTAAYD CCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASISAWLSAQAGEPFPGELSLAFQKSQDLRYGENPHQRGAFYREHAAPQEPTVAFAKVLQ CHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCHHHHHCCCCCCHHHHHHHHC GKELSYNNILDLDAALGLLLEFPEAPAAVIIKHNTPCGVAVDAALVKAYRTARAVDEVSA CCCCCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH FGGIVALNREVDAATAQAMAETFLEAVIAPSYSPEALQVLATKKNLRLLEAGPALASPQA HCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCC RPRAQLDARSVSGGMLLMDRDSVEPPLSWKVVSKRAPTPEEEQAMRFAWKVCKHVKSNAI CCCHHCCHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEE VFASGDQLLAQGGGQTNRVDSVRIAMQRGGAALRGSAVASDAFFPFRDGLDEAARAGATC EEECCCHHHHCCCCCCCCHHHHHHHHHCCCCEEECCCHHCCCCCCHHCCHHHHHHCCCEE VVQPGGSVRDAELIAAADEHGMAMVLTGVRHFRH EECCCCCCCCCCEEEECCCCCEEHHHHHHHHHCC >Mature Secondary Structure MLALLSVSDKRGLVPFAQGLVRLGFRLLSTGGTLEALKGAGVPVNKVSEHTQSPEILGGR CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHCCCCHHHCCC VKTLHPRIHGGILGRLELEADREEMKAHGIEPISLVAVNLYPFRQTVASGAAEPEVIEQI CEEECCHHCCCEEEEEEECCCHHHHHHCCCCCEEEEEEEEHHHHHHHHCCCCCCHHHHHH DIGGPAMVRASAKNFRHVSVVVDPDDYPAVLAELEQQKAVSEDTRRRLMRKAFAHTAAYD CCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ASISAWLSAQAGEPFPGELSLAFQKSQDLRYGENPHQRGAFYREHAAPQEPTVAFAKVLQ CHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHCCCHHHHHCCCCCCHHHHHHHHC GKELSYNNILDLDAALGLLLEFPEAPAAVIIKHNTPCGVAVDAALVKAYRTARAVDEVSA CCCCCCCCEECHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH FGGIVALNREVDAATAQAMAETFLEAVIAPSYSPEALQVLATKKNLRLLEAGPALASPQA HCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCC RPRAQLDARSVSGGMLLMDRDSVEPPLSWKVVSKRAPTPEEEQAMRFAWKVCKHVKSNAI CCCHHCCHHCCCCCEEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEE VFASGDQLLAQGGGQTNRVDSVRIAMQRGGAALRGSAVASDAFFPFRDGLDEAARAGATC EEECCCHHHHCCCCCCCCHHHHHHHHHCCCCEEECCCHHCCCCCCHHCCHHHHHHCCCEE VVQPGGSVRDAELIAAADEHGMAMVLTGVRHFRH EECCCCCCCCCCEEEECCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA