| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759801
Identifier: 108759801
GI number: 108759801
Start: 5548617
End: 5549099
Strand: Reverse
Name: 108759801
Synonym: MXAN_4480
Alternate gene names: NA
Gene position: 5549099-5548617 (Counterclockwise)
Preceding gene: 108761818
Following gene: 108761827
Centisome position: 60.71
GC content: 71.01
Gene sequence:
>483_bases GTGGGGCGGCGCTGTGTGACAGGGGCTCGTCGCGCATCGACACGGCCGCCAAGATGCGGCAGGAAGGGCGTTCCCGAGTC GCGAGCCTCCTGCCCGCGGCAGACGGGGTCCTCGGTGTTCCTGGTACCTCGACGCATGAACGAAGAACTGGCGACCCGCA TTGGAAGTGCCGCCCGAGAGGCCCGGACGCAGCTCGGGCTCACGCAGGCGGAAGTGGCCGAGAAGCTGGGCCTGGCGCAC ATGGTCTACAGCCGCCTGGAGCGCGGGAAGATGCTGCCCAGCGTGCAGACGCTGCTGCGGATGTGCGCGGTGCTGCGCAT CGGCTCGGACGAGCTGCTGGGGCTCGCGGACGCGGAGGAGGGGAAGGGGGCGCGAGGCCCGGGCGGAGCGCCCAGGCTGC GGCAGCTCACCGGCCTCGCGCGAAAGATGGACGAGGAGCAACTCGACGCCCTCGTGAAGGTGGCCCAGGTGCTGCTGCGT TGA
Upstream 100 bases:
>100_bases CACGCTGGTGGACCTGTGCGGCGTCCTTCGTGTCTCCGTGGACCTCCTCCTGAGCGGCGAGGGCCTGGCGTTTCCCGCGC CCGAGGGGGCCGGCCGGTAG
Downstream 100 bases:
>100_bases AGCGTCGCCCGGCCGCCCGTGCTCACTTCGAGTTCGGCGCGAGCGTCGCTTCGTCTGCGTCCAGTCCCTCGGGGAAGATT CCCGCTTCGTCCAGCTCCAC
Product: DNA-binding protein
Products: NA
Alternate protein names: Transcriptional Repressor; Transcriptional Regulator; Lambda Transcriptional Repressor-Like Protein
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MGRRCVTGARRASTRPPRCGRKGVPESRASCPRQTGSSVFLVPRRMNEELATRIGSAAREARTQLGLTQAEVAEKLGLAH MVYSRLERGKMLPSVQTLLRMCAVLRIGSDELLGLADAEEGKGARGPGGAPRLRQLTGLARKMDEEQLDALVKVAQVLLR
Sequences:
>Translated_160_residues MGRRCVTGARRASTRPPRCGRKGVPESRASCPRQTGSSVFLVPRRMNEELATRIGSAAREARTQLGLTQAEVAEKLGLAH MVYSRLERGKMLPSVQTLLRMCAVLRIGSDELLGLADAEEGKGARGPGGAPRLRQLTGLARKMDEEQLDALVKVAQVLLR >Mature_159_residues GRRCVTGARRASTRPPRCGRKGVPESRASCPRQTGSSVFLVPRRMNEELATRIGSAAREARTQLGLTQAEVAEKLGLAHM VYSRLERGKMLPSVQTLLRMCAVLRIGSDELLGLADAEEGKGARGPGGAPRLRQLTGLARKMDEEQLDALVKVAQVLLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17360; Mature: 17228
Theoretical pI: Translated: 11.49; Mature: 11.49
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRRCVTGARRASTRPPRCGRKGVPESRASCPRQTGSSVFLVPRRMNEELATRIGSAARE CCCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCHHCCCCEEEECHHCCHHHHHHHHHHHHH ARTQLGLTQAEVAEKLGLAHMVYSRLERGKMLPSVQTLLRMCAVLRIGSDELLGLADAEE HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCC GKGARGPGGAPRLRQLTGLARKMDEEQLDALVKVAQVLLR CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC >Mature Secondary Structure GRRCVTGARRASTRPPRCGRKGVPESRASCPRQTGSSVFLVPRRMNEELATRIGSAARE CCCCCCCHHHCCCCCCCCCCCCCCHHHHCCCHHCCCCEEEECHHCCHHHHHHHHHHHHH ARTQLGLTQAEVAEKLGLAHMVYSRLERGKMLPSVQTLLRMCAVLRIGSDELLGLADAEE HHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCC GKGARGPGGAPRLRQLTGLARKMDEEQLDALVKVAQVLLR CCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA