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The map label for this gene is ccmH [H]

Identifier: 108759785

GI number: 108759785

Start: 3786829

End: 3787353

Strand: Reverse

Name: ccmH [H]

Synonym: MXAN_3235

Alternate gene names: 108759785

Gene position: 3787353-3786829 (Counterclockwise)

Preceding gene: 108758492

Following gene: 108760139

Centisome position: 41.44

GC content: 71.05

Gene sequence:

>525_bases
ATGACCGCTGCCCTCCTGTCCCTGTCCCTCGCCTTCACGCTCGTCACCGGCCAGTTCGCGCCCCAGCAGGCGGGAAGTGA
CCCGCTCGCGCCGGAGCTGGAGACGCGTGCCCAGACGCTGGGCAAGCAGCTCCGGTGCGCCGTGTGCCAGGGACTGTCTG
TGGCGGACAGCCCGTCCTCCATGGCGCGCGCCCAGCTCGACATGATTCGCGAGCTCGTCTCCGAGGGGAAGAGCGACGCC
GAAATCGTCGAGTACTTCGTCGCCCGCTACGGTGAGTGGGTGCTGCTGTCCCCCCGCGCGGAAGGCTTCAACTGGTTCGT
GTGGCTGGGCCCGGTGGGGCTCGTCGCCGTGGGCGCCTTCGTCATCTGGCGGCAGCTCCAGCGCGGCGCGGGTACCCCGG
AGCAGACCCCGCCCGCGGCCACGACTTCGGAAGAAACGGCGGCCCCGGCCGCGCCCGCTGGAACGCCTCCAGTGGATGAA
GAAGACCCGTACCTCCAGGCCGTGCGCCGGGAGCTCGAGCGCTAG

Upstream 100 bases:

>100_bases
GGCACAGCGGGCCGGGCGGCGGGCCAGCCCCCCGCCGCTCAGGTTTCACTGTCCAATCACGGCCTGGGGCGCTAGGTAGG
GACGGCTCGATGGAGCTTCG

Downstream 100 bases:

>100_bases
GAGCGCCAGGCCATGCAGCCCCAGACGACGAATTGGTTGCCCGGAATCATCGTGCTCGCCGTCACCTTCGTGTTGGCGGC
GGGCTGGATCCTCTTTCAGC

Product: CcmH family cytochrome c biogenesis protein

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTAALLSLSLAFTLVTGQFAPQQAGSDPLAPELETRAQTLGKQLRCAVCQGLSVADSPSSMARAQLDMIRELVSEGKSDA
EIVEYFVARYGEWVLLSPRAEGFNWFVWLGPVGLVAVGAFVIWRQLQRGAGTPEQTPPAATTSEETAAPAAPAGTPPVDE
EDPYLQAVRRELER

Sequences:

>Translated_174_residues
MTAALLSLSLAFTLVTGQFAPQQAGSDPLAPELETRAQTLGKQLRCAVCQGLSVADSPSSMARAQLDMIRELVSEGKSDA
EIVEYFVARYGEWVLLSPRAEGFNWFVWLGPVGLVAVGAFVIWRQLQRGAGTPEQTPPAATTSEETAAPAAPAGTPPVDE
EDPYLQAVRRELER
>Mature_173_residues
TAALLSLSLAFTLVTGQFAPQQAGSDPLAPELETRAQTLGKQLRCAVCQGLSVADSPSSMARAQLDMIRELVSEGKSDAE
IVEYFVARYGEWVLLSPRAEGFNWFVWLGPVGLVAVGAFVIWRQLQRGAGTPEQTPPAATTSEETAAPAAPAGTPPVDEE
DPYLQAVRRELER

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=90, Percent_Identity=40, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 18686; Mature: 18555

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAALLSLSLAFTLVTGQFAPQQAGSDPLAPELETRAQTLGKQLRCAVCQGLSVADSPSS
CCHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MARAQLDMIRELVSEGKSDAEIVEYFVARYGEWVLLSPRAEGFNWFVWLGPVGLVAVGAF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECHHHHHHHHHH
VIWRQLQRGAGTPEQTPPAATTSEETAAPAAPAGTPPVDEEDPYLQAVRRELER
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TAALLSLSLAFTLVTGQFAPQQAGSDPLAPELETRAQTLGKQLRCAVCQGLSVADSPSS
CHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MARAQLDMIRELVSEGKSDAEIVEYFVARYGEWVLLSPRAEGFNWFVWLGPVGLVAVGAF
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECHHHHHHHHHH
VIWRQLQRGAGTPEQTPPAATTSEETAAPAAPAGTPPVDEEDPYLQAVRRELER
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7715602; 11481430 [H]