The gene/protein map for NC_012563 is currently unavailable.
Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is chiA1 [H]

Identifier: 108759728

GI number: 108759728

Start: 1931763

End: 1932995

Strand: Reverse

Name: chiA1 [H]

Synonym: MXAN_1630

Alternate gene names: 108759728

Gene position: 1932995-1931763 (Counterclockwise)

Preceding gene: 108758621

Following gene: 108760802

Centisome position: 21.15

GC content: 66.34

Gene sequence:

>1233_bases
GTGACGGGCAGCACCAACACGGCGGTGACGTGGTCCGTGCAGGAGGGCGCGGCGGGAGGCACCGTCACGCCGGCGGGCCT
GTACACCGCTCCGGCCATCGCGGGCACCTACCACGTGGTCGCGACGAGCCAGGCGGATCCCACGAAATCGGCGGTGGCCA
CCGTCACCGTCCCGAACACGCCCCCGCCGCCGAGCGGCACGTGGGTGTCGGGCTACTACACCGGCTGGAACGCCGACATG
TACCCGCCGGAGAAGGTGGACTTCTCCGCGCTCACGCACATCCTCGTTGGCCGCGTCACTCCCAATCCGGATGGGACCGT
GAACACCCAGTTCGACAACTCGAATGGCCCGGCCATCGCGCGGACACTGTCCACGCGGGCGCACGCAGCCGGACGCAAGG
CCATCATCATGGTGGGCGGCGCGGGTGAGCACGACGGCTGGGTGGGCGCGGCGTCCAACGCGAACCGCGCCCAGTTCGTC
CAGAACCTGCTCAACGCGATGGATACCTTTGGCTATGACGGCCTGGATATCGACTGGGAGCCGGTGGAACAGGTGGACAA
GCCGGCGTTGCTCGCGCTGATACAGGCGCTGCGCGCGGCCCGGCCGCAGATGCTGCTCACCATGCCCATCGGCTGGGTCA
ACAGCAACTTCCCCGAGGATGCGGACCCGTGGTTCACCAACCTGGTCCCCTACCTGGACCAGATGAACGTGATGACCTAC
GAGATGACGGGCCCCTGGGGCGGCTGGCTGTCCTGGTACACCTCCGCGCTCACGGGCGAGGCGGGCAACCACCCCACGTC
CGTCTCCTCCAGCCTCAGCGCCTGGGCCAACGCGGGCATCCCCAAGAACAAGCTGGGCATGGGCATCCCGTTCTATGGCA
TGGCGTGGCGGAACATCACCGGCCCGTATCAGCCGTACACGGACTGGTCTGACTACGTGGGCAGCGACAATTCCTTCACA
TACAGCAAGATTCTCCAGTTGTCGGCGACGGGCGTCTACCACTGGGACGAGGCGGCGAAGGCCAGCTACGTCACCTTCGA
CGTCCCCGTGGAGGACGGCACGGTGCGGTGGATTTCGTATGACTCACCGCAAACCATTGCCGCCAAGGGCGCCTTCGCCC
ATGACAACGGATACGGTGGCACCATCATCTGGACCATCAACCAGGGATGCACCGACCCACAGACTGGCGCCAATCCGCTG
CTCGACGCGGTGAAGAACGCCTTCCTGCCATGA

Upstream 100 bases:

>100_bases
CGTGCGTGGCATGGCCACGCCGCCTCCGCCCGTGGAGGTGGCCATCACCCCCACCTCCGCCACGGTTCCGGCCGGGGGGA
CGCAGGCCTTCACTGCCACG

Downstream 100 bases:

>100_bases
CCCGGAGAGGGCAAGGGACCGCGCTGTGCACGCAGCGCGGCCCATGACTCCACAAGAAGTGCCCTACCTGGGGCGTCAAA
ACGCCCCCCGTGAGAAGCGA

Product: putative chitinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTGSTNTAVTWSVQEGAAGGTVTPAGLYTAPAIAGTYHVVATSQADPTKSAVATVTVPNTPPPPSGTWVSGYYTGWNADM
YPPEKVDFSALTHILVGRVTPNPDGTVNTQFDNSNGPAIARTLSTRAHAAGRKAIIMVGGAGEHDGWVGAASNANRAQFV
QNLLNAMDTFGYDGLDIDWEPVEQVDKPALLALIQALRAARPQMLLTMPIGWVNSNFPEDADPWFTNLVPYLDQMNVMTY
EMTGPWGGWLSWYTSALTGEAGNHPTSVSSSLSAWANAGIPKNKLGMGIPFYGMAWRNITGPYQPYTDWSDYVGSDNSFT
YSKILQLSATGVYHWDEAAKASYVTFDVPVEDGTVRWISYDSPQTIAAKGAFAHDNGYGGTIIWTINQGCTDPQTGANPL
LDAVKNAFLP

Sequences:

>Translated_410_residues
MTGSTNTAVTWSVQEGAAGGTVTPAGLYTAPAIAGTYHVVATSQADPTKSAVATVTVPNTPPPPSGTWVSGYYTGWNADM
YPPEKVDFSALTHILVGRVTPNPDGTVNTQFDNSNGPAIARTLSTRAHAAGRKAIIMVGGAGEHDGWVGAASNANRAQFV
QNLLNAMDTFGYDGLDIDWEPVEQVDKPALLALIQALRAARPQMLLTMPIGWVNSNFPEDADPWFTNLVPYLDQMNVMTY
EMTGPWGGWLSWYTSALTGEAGNHPTSVSSSLSAWANAGIPKNKLGMGIPFYGMAWRNITGPYQPYTDWSDYVGSDNSFT
YSKILQLSATGVYHWDEAAKASYVTFDVPVEDGTVRWISYDSPQTIAAKGAFAHDNGYGGTIIWTINQGCTDPQTGANPL
LDAVKNAFLP
>Mature_409_residues
TGSTNTAVTWSVQEGAAGGTVTPAGLYTAPAIAGTYHVVATSQADPTKSAVATVTVPNTPPPPSGTWVSGYYTGWNADMY
PPEKVDFSALTHILVGRVTPNPDGTVNTQFDNSNGPAIARTLSTRAHAAGRKAIIMVGGAGEHDGWVGAASNANRAQFVQ
NLLNAMDTFGYDGLDIDWEPVEQVDKPALLALIQALRAARPQMLLTMPIGWVNSNFPEDADPWFTNLVPYLDQMNVMTYE
MTGPWGGWLSWYTSALTGEAGNHPTSVSSSLSAWANAGIPKNKLGMGIPFYGMAWRNITGPYQPYTDWSDYVGSDNSFTY
SKILQLSATGVYHWDEAAKASYVTFDVPVEDGTVRWISYDSPQTIAAKGAFAHDNGYGGTIIWTINQGCTDPQTGANPLL
DAVKNAFLP

Specific function: Unknown

COG id: COG3325

COG function: function code G; Chitinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 fibronectin type-III domains [H]

Homologues:

Organism=Homo sapiens, GI144226251, Length=369, Percent_Identity=22.2222222222222, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI58386720, Length=282, Percent_Identity=23.4042553191489, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI42542398, Length=282, Percent_Identity=24.822695035461, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI133893286, Length=375, Percent_Identity=21.8666666666667, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4502809, Length=348, Percent_Identity=23.2758620689655, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17559362, Length=363, Percent_Identity=24.5179063360882, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17551250, Length=282, Percent_Identity=28.7234042553192, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17535565, Length=365, Percent_Identity=23.5616438356164, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17563680, Length=379, Percent_Identity=24.5382585751979, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI115533992, Length=351, Percent_Identity=20.5128205128205, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17531695, Length=347, Percent_Identity=21.3256484149856, Blast_Score=71, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17535575, Length=278, Percent_Identity=22.3021582733813, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17535579, Length=275, Percent_Identity=21.4545454545455, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI221330815, Length=380, Percent_Identity=26.0526315789474, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24655584, Length=255, Percent_Identity=28.2352941176471, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI45550474, Length=277, Percent_Identity=24.187725631769, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21358195, Length=374, Percent_Identity=22.7272727272727, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI116007452, Length=396, Percent_Identity=24.7474747474747, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI28573679, Length=359, Percent_Identity=25.0696378830084, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI22024049, Length=352, Percent_Identity=25.8522727272727, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003610
- InterPro:   IPR011583
- InterPro:   IPR008957
- InterPro:   IPR003961
- InterPro:   IPR001223
- InterPro:   IPR001579
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF02839 CBM_5_12; PF00041 fn3; PF00704 Glyco_hydro_18 [H]

EC number: =3.2.1.14 [H]

Molecular weight: Translated: 43860; Mature: 43729

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS01095 CHITINASE_18

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGSTNTAVTWSVQEGAAGGTVTPAGLYTAPAIAGTYHVVATSQADPTKSAVATVTVPNT
CCCCCCCEEEEEECCCCCCCCCCCCCCEECCHHCCEEEEEEECCCCCCCCEEEEEECCCC
PPPPSGTWVSGYYTGWNADMYPPEKVDFSALTHILVGRVTPNPDGTVNTQFDNSNGPAIA
CCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEE
RTLSTRAHAAGRKAIIMVGGAGEHDGWVGAASNANRAQFVQNLLNAMDTFGYDGLDIDWE
HHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PVEQVDKPALLALIQALRAARPQMLLTMPIGWVNSNFPEDADPWFTNLVPYLDQMNVMTY
HHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
EMTGPWGGWLSWYTSALTGEAGNHPTSVSSSLSAWANAGIPKNKLGMGIPFYGMAWRNIT
EECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHCCCC
GPYQPYTDWSDYVGSDNSFTYSKILQLSATGVYHWDEAAKASYVTFDVPVEDGTVRWISY
CCCCCCCCHHHHCCCCCCEEHHHHHEECCCCEEEECCCCCCEEEEEEEECCCCEEEEEEE
DSPQTIAAKGAFAHDNGYGGTIIWTINQGCTDPQTGANPLLDAVKNAFLP
CCCCEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
TGSTNTAVTWSVQEGAAGGTVTPAGLYTAPAIAGTYHVVATSQADPTKSAVATVTVPNT
CCCCCCEEEEEECCCCCCCCCCCCCCEECCHHCCEEEEEEECCCCCCCCEEEEEECCCC
PPPPSGTWVSGYYTGWNADMYPPEKVDFSALTHILVGRVTPNPDGTVNTQFDNSNGPAIA
CCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEE
RTLSTRAHAAGRKAIIMVGGAGEHDGWVGAASNANRAQFVQNLLNAMDTFGYDGLDIDWE
HHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
PVEQVDKPALLALIQALRAARPQMLLTMPIGWVNSNFPEDADPWFTNLVPYLDQMNVMTY
HHHHCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEE
EMTGPWGGWLSWYTSALTGEAGNHPTSVSSSLSAWANAGIPKNKLGMGIPFYGMAWRNIT
EECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCHHCCCC
GPYQPYTDWSDYVGSDNSFTYSKILQLSATGVYHWDEAAKASYVTFDVPVEDGTVRWISY
CCCCCCCCHHHHCCCCCCEEHHHHHEECCCCEEEECCCCCCEEEEEEEECCCCEEEEEEE
DSPQTIAAKGAFAHDNGYGGTIIWTINQGCTDPQTGANPLLDAVKNAFLP
CCCCEEEECCCEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2203782; 8103047 [H]