| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is kinA [H]
Identifier: 108759722
GI number: 108759722
Start: 108152
End: 110458
Strand: Reverse
Name: kinA [H]
Synonym: MXAN_0095
Alternate gene names: 108759722
Gene position: 110458-108152 (Counterclockwise)
Preceding gene: 108758711
Following gene: 108763737
Centisome position: 1.21
GC content: 68.66
Gene sequence:
>2307_bases TTGGCTGCGCCCTGGCAACCCAAGGGAAGCATGTCGACAGAGCAGTGGGCCCACCGCTTCTTCGAGCTGTCCACGGAGCC CTACGTCATCCTGGGCCGTGATGGCGTGTTGCTCGAAGCCAATCCTGCCTTTGGCCACCTGGTGGGCCTGTCTTTGACGT CACTGCGTGGCATGGCCTTGCAGGATTTCATCCCCATCGAAGATGCCGCCGTCCTGTTCGCGCATCTGGGTTCCACAAGC CCCACCTCGCGCACCTGCCGTTGGCGCCGGCCGGATGGGTCCTGGCTGCCTCTGTCCTGGCGCATCACCGCCGCTTCGGA GTCGGAGCCACTCTACTGCACGGTGCAGCGGGCCGAGGAACCATCCGCCGCCCCCTGGCCGGAGAGTGACTACCTGCCCT TCGGCCTCTACCTGGTCGACATCCGCACGCGCCGGGTCCACTACGTCAACCACCGCTTCTGCCAACTGTGGGGCATCACC GAGTTGGAGGGCGCCATCCAGCGGGGTGAGTTGTCCCATGACGAGGTGATCCACCATTGCCTCAAGGCTGGCGACGCGGC GGAGTTCCTGCGCCTGTGCGCGGCCCCGGACCAGGGCTGCGTGCCGGGCCTGGTGGAGGACGAAGCCAGGCTGTCGGATG GACGCACCCTGCGACGGCTGTCCACGTCCTCCTCGGTCGCGGGGGACGCCATGCGCTACCGGATGTTCGCGTTCGAGGAC GTCACCGAGAGCAAGCGCACGCAGGAGGCGCTGCGCCGTTCAGAGGAGAGCTTCCGCAGGCTCATCGACCGGGCGCCCGA AGGCATCTTCGTGCACACCCAGCGGCGCTTCATCTACGCCAACCCCACGCTGCTGCGGGCCCTGGGCTACGACGACCCGG CCGAGCTGATGGCAAAGCCCATCTGGAGCATCGTCCATCCGGATGACCTGGAGCTCGTGAAGGACCGCGTGCACACCGCG GCCGTGAAGGGCGCGCTGGCCCCGCTGCGGGAGGTCCGCTACCTGCGGCGCGACGGCACCTGGTACGACGCGGAGAGCGT GGGCATCCCCATCGAGTTCGACGGACACGAGGCCGTCGTGGTGATGGCGCGCGACATCACCGAGCGCAAGCAGGCCCAGT CGCAGCTCCTGCAGAACGACCGCATGGTGCTGGCCGGCACGCTGGCGGCGGGCGTGGGGCACGAAATCAACAACCCGCTG ACCTACGTCATGGCCAACCTGGCCTCGGCCCTGGAGTCCGTGAGCCGCCTGGGCGCGGAGCTGACGCGGGCCGGAGAGCG CGGTCCCAGCAGCGTGGCGTGGCCCGCGACGCTGCATGACGCGGAGGCCCTGCTGAAGGAGGCGCAAGAAGGCGCCATGC GCGTGCGCAACATCGTGCGGGACTTGAAGTTCATCTCCCGTCAGGATGAGGAGCGGCGCGAAGCGGTGGACGTGCGGCAG CCGTTGGACTTCTCCATCAACATGGCCGCCAGCCAACTGCGTCACCGGGCGCGGCTCATCAAGAAGTACGAGTCCGTCCC CCGCGTGTACGCGGACGGCTCGCGCCTGGGCCAGGTGTTCCTCAACCTGCTGGTGAACTCGGCGCAGGCCATTCCCGAAG GCAACGCCGAGGAGCACCACATCACCGTGTGGGTCCGCGCCGGACCGCCGGGCAGCGTGCTGGTGGACGTGAGCGACTCC GGCTGCGGCATGACGCCCGCGGTGCTCTCCCGCGTCTTCGACCCCTTCTTCACCACCAAGCCCGTGGGCAAGGGCACGGG GCTGGGGCTGTCCATCTGCCACAGCCTCATCCGCAAGCAGGGCGGTGACATCACCGTCCGCAGCGAACTGGGCCAGGGCA CCACCTTCACCGTCACCCTGCCCACGGCGCCGGACGCCGTCCCGACCCAGGCCGCGCCGGTGGCGCCCGCGCCCCACGCC GAGCGGCGGGGACAGGTGCTGGTGATTGACGACGAGCCCGCGGTGGGCCGCTCCCTGGCGCGCATCATCGGCATGCGGCA CCGGGTGACGGTGGTGAACAACGGCGAGGACGCGCTGGCGGTGCTGACATCGGGCGCGCCGTTCGACGCCGTCTTCTGCG ACCTGATGATGCCGGGCATCTCCGGCATGGACGTCTACGAGCGCGTCCGCGAGCGCGGGGATGGCATCGCCGAGCGCTTC ATCTTCATCACCGGCGGCTCGTACACCACGCGGGCCCGTCAGTTCCTGGAGCGCGTGCCGAACCTGCAGATTGAGAAGCC CTTCGACGTGGAGTCGATTCATCAGGGCCTGGGACAACTCCTGGGTGCCTCTCGTGGTAGCGAATGA
Upstream 100 bases:
>100_bases ACATGCAATTTTTCCACAAATAGTGTCTATGTCCCGGAAAGCGCAAAGGCGTCTACGAACACCTCGCATGCCATGACCCG GCCTTCCCCCCAAGCCGGCG
Downstream 100 bases:
>100_bases CGCCGGGCGTCCTCCCGGCCCAACTGTGAAAGGAGTCCTCGGGTGATTGACGGCAACTTCGTCATCGATGCGGTGACACA CGCCTACAACCTCCATCCCA
Product: sensory box histidine kinase/response regulator
Products: NA
Alternate protein names: Stage II sporulation protein F; Stage II sporulation protein J [H]
Number of amino acids: Translated: 768; Mature: 767
Protein sequence:
>768_residues MAAPWQPKGSMSTEQWAHRFFELSTEPYVILGRDGVLLEANPAFGHLVGLSLTSLRGMALQDFIPIEDAAVLFAHLGSTS PTSRTCRWRRPDGSWLPLSWRITAASESEPLYCTVQRAEEPSAAPWPESDYLPFGLYLVDIRTRRVHYVNHRFCQLWGIT ELEGAIQRGELSHDEVIHHCLKAGDAAEFLRLCAAPDQGCVPGLVEDEARLSDGRTLRRLSTSSSVAGDAMRYRMFAFED VTESKRTQEALRRSEESFRRLIDRAPEGIFVHTQRRFIYANPTLLRALGYDDPAELMAKPIWSIVHPDDLELVKDRVHTA AVKGALAPLREVRYLRRDGTWYDAESVGIPIEFDGHEAVVVMARDITERKQAQSQLLQNDRMVLAGTLAAGVGHEINNPL TYVMANLASALESVSRLGAELTRAGERGPSSVAWPATLHDAEALLKEAQEGAMRVRNIVRDLKFISRQDEERREAVDVRQ PLDFSINMAASQLRHRARLIKKYESVPRVYADGSRLGQVFLNLLVNSAQAIPEGNAEEHHITVWVRAGPPGSVLVDVSDS GCGMTPAVLSRVFDPFFTTKPVGKGTGLGLSICHSLIRKQGGDITVRSELGQGTTFTVTLPTAPDAVPTQAAPVAPAPHA ERRGQVLVIDDEPAVGRSLARIIGMRHRVTVVNNGEDALAVLTSGAPFDAVFCDLMMPGISGMDVYERVRERGDGIAERF IFITGGSYTTRARQFLERVPNLQIEKPFDVESIHQGLGQLLGASRGSE
Sequences:
>Translated_768_residues MAAPWQPKGSMSTEQWAHRFFELSTEPYVILGRDGVLLEANPAFGHLVGLSLTSLRGMALQDFIPIEDAAVLFAHLGSTS PTSRTCRWRRPDGSWLPLSWRITAASESEPLYCTVQRAEEPSAAPWPESDYLPFGLYLVDIRTRRVHYVNHRFCQLWGIT ELEGAIQRGELSHDEVIHHCLKAGDAAEFLRLCAAPDQGCVPGLVEDEARLSDGRTLRRLSTSSSVAGDAMRYRMFAFED VTESKRTQEALRRSEESFRRLIDRAPEGIFVHTQRRFIYANPTLLRALGYDDPAELMAKPIWSIVHPDDLELVKDRVHTA AVKGALAPLREVRYLRRDGTWYDAESVGIPIEFDGHEAVVVMARDITERKQAQSQLLQNDRMVLAGTLAAGVGHEINNPL TYVMANLASALESVSRLGAELTRAGERGPSSVAWPATLHDAEALLKEAQEGAMRVRNIVRDLKFISRQDEERREAVDVRQ PLDFSINMAASQLRHRARLIKKYESVPRVYADGSRLGQVFLNLLVNSAQAIPEGNAEEHHITVWVRAGPPGSVLVDVSDS GCGMTPAVLSRVFDPFFTTKPVGKGTGLGLSICHSLIRKQGGDITVRSELGQGTTFTVTLPTAPDAVPTQAAPVAPAPHA ERRGQVLVIDDEPAVGRSLARIIGMRHRVTVVNNGEDALAVLTSGAPFDAVFCDLMMPGISGMDVYERVRERGDGIAERF IFITGGSYTTRARQFLERVPNLQIEKPFDVESIHQGLGQLLGASRGSE >Mature_767_residues AAPWQPKGSMSTEQWAHRFFELSTEPYVILGRDGVLLEANPAFGHLVGLSLTSLRGMALQDFIPIEDAAVLFAHLGSTSP TSRTCRWRRPDGSWLPLSWRITAASESEPLYCTVQRAEEPSAAPWPESDYLPFGLYLVDIRTRRVHYVNHRFCQLWGITE LEGAIQRGELSHDEVIHHCLKAGDAAEFLRLCAAPDQGCVPGLVEDEARLSDGRTLRRLSTSSSVAGDAMRYRMFAFEDV TESKRTQEALRRSEESFRRLIDRAPEGIFVHTQRRFIYANPTLLRALGYDDPAELMAKPIWSIVHPDDLELVKDRVHTAA VKGALAPLREVRYLRRDGTWYDAESVGIPIEFDGHEAVVVMARDITERKQAQSQLLQNDRMVLAGTLAAGVGHEINNPLT YVMANLASALESVSRLGAELTRAGERGPSSVAWPATLHDAEALLKEAQEGAMRVRNIVRDLKFISRQDEERREAVDVRQP LDFSINMAASQLRHRARLIKKYESVPRVYADGSRLGQVFLNLLVNSAQAIPEGNAEEHHITVWVRAGPPGSVLVDVSDSG CGMTPAVLSRVFDPFFTTKPVGKGTGLGLSICHSLIRKQGGDITVRSELGQGTTFTVTLPTAPDAVPTQAAPVAPAPHAE RRGQVLVIDDEPAVGRSLARIIGMRHRVTVVNNGEDALAVLTSGAPFDAVFCDLMMPGISGMDVYERVRERGDGIAERFI FITGGSYTTRARQFLERVPNLQIEKPFDVESIHQGLGQLLGASRGSE
Specific function: Phosphorylates the sporulation-regulatory proteins spo0A and spo0F. It also autophosphorylates in the presence of ATP [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=262, Percent_Identity=31.6793893129771, Blast_Score=118, Evalue=1e-27, Organism=Escherichia coli, GI48994928, Length=374, Percent_Identity=29.144385026738, Blast_Score=114, Evalue=2e-26, Organism=Escherichia coli, GI1788549, Length=272, Percent_Identity=28.6764705882353, Blast_Score=105, Evalue=2e-23, Organism=Escherichia coli, GI87081816, Length=212, Percent_Identity=28.7735849056604, Blast_Score=87, Evalue=4e-18, Organism=Escherichia coli, GI145693157, Length=296, Percent_Identity=30.7432432432432, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1790300, Length=267, Percent_Identity=28.0898876404494, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788713, Length=413, Percent_Identity=23.4866828087167, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 84750; Mature: 84619
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPWQPKGSMSTEQWAHRFFELSTEPYVILGRDGVLLEANPAFGHLVGLSLTSLRGMAL CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHCCCHH QDFIPIEDAAVLFAHLGSTSPTSRTCRWRRPDGSWLPLSWRITAASESEPLYCTVQRAEE HHCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCC PSAAPWPESDYLPFGLYLVDIRTRRVHYVNHRFCQLWGITELEGAIQRGELSHDEVIHHC CCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHH LKAGDAAEFLRLCAAPDQGCVPGLVEDEARLSDGRTLRRLSTSSSVAGDAMRYRMFAFED HHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH VTESKRTQEALRRSEESFRRLIDRAPEGIFVHTQRRFIYANPTLLRALGYDDPAELMAKP HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHCCCCCHHHHHHHH IWSIVHPDDLELVKDRVHTAAVKGALAPLREVRYLRRDGTWYDAESVGIPIEFDGHEAVV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEE VMARDITERKQAQSQLLQNDRMVLAGTLAAGVGHEINNPLTYVMANLASALESVSRLGAE EEEHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LTRAGERGPSSVAWPATLHDAEALLKEAQEGAMRVRNIVRDLKFISRQDEERREAVDVRQ HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PLDFSINMAASQLRHRARLIKKYESVPRVYADGSRLGQVFLNLLVNSAQAIPEGNAEEHH CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE ITVWVRAGPPGSVLVDVSDSGCGMTPAVLSRVFDPFFTTKPVGKGTGLGLSICHSLIRKQ EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHC GGDITVRSELGQGTTFTVTLPTAPDAVPTQAAPVAPAPHAERRGQVLVIDDEPAVGRSLA CCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCHHHHHHH RIIGMRHRVTVVNNGEDALAVLTSGAPFDAVFCDLMMPGISGMDVYERVRERGDGIAERF HHHCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEE IFITGGSYTTRARQFLERVPNLQIEKPFDVESIHQGLGQLLGASRGSE EEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AAPWQPKGSMSTEQWAHRFFELSTEPYVILGRDGVLLEANPAFGHLVGLSLTSLRGMAL CCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEECCCCHHHHHHHHHHHHCCCHH QDFIPIEDAAVLFAHLGSTSPTSRTCRWRRPDGSWLPLSWRITAASESEPLYCTVQRAEE HHCCCCHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCEEEEEECCCC PSAAPWPESDYLPFGLYLVDIRTRRVHYVNHRFCQLWGITELEGAIQRGELSHDEVIHHC CCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHH LKAGDAAEFLRLCAAPDQGCVPGLVEDEARLSDGRTLRRLSTSSSVAGDAMRYRMFAFED HHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHH VTESKRTQEALRRSEESFRRLIDRAPEGIFVHTQRRFIYANPTLLRALGYDDPAELMAKP HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCHHHHHCCCCCHHHHHHHH IWSIVHPDDLELVKDRVHTAAVKGALAPLREVRYLRRDGTWYDAESVGIPIEFDGHEAVV HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEE VMARDITERKQAQSQLLQNDRMVLAGTLAAGVGHEINNPLTYVMANLASALESVSRLGAE EEEHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LTRAGERGPSSVAWPATLHDAEALLKEAQEGAMRVRNIVRDLKFISRQDEERREAVDVRQ HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC PLDFSINMAASQLRHRARLIKKYESVPRVYADGSRLGQVFLNLLVNSAQAIPEGNAEEHH CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEE ITVWVRAGPPGSVLVDVSDSGCGMTPAVLSRVFDPFFTTKPVGKGTGLGLSICHSLIRKQ EEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHCHHHCCCCCCCCCCCHHHHHHHHHHHC GGDITVRSELGQGTTFTVTLPTAPDAVPTQAAPVAPAPHAERRGQVLVIDDEPAVGRSLA CCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCEEEECCCCHHHHHHH RIIGMRHRVTVVNNGEDALAVLTSGAPFDAVFCDLMMPGISGMDVYERVRERGDGIAERF HHHCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEE IFITGGSYTTRARQFLERVPNLQIEKPFDVESIHQGLGQLLGASRGSE EEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2104615; 2509430; 9384377 [H]