| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759671
Identifier: 108759671
GI number: 108759671
Start: 1424874
End: 1426232
Strand: Direct
Name: 108759671
Synonym: MXAN_1213
Alternate gene names: NA
Gene position: 1424874-1426232 (Clockwise)
Preceding gene: 108760232
Following gene: 108759428
Centisome position: 15.59
GC content: 68.06
Gene sequence:
>1359_bases GTGAGGTTCTCCATGGGGATGTTGGACAGGATGCGCGCCGCGTTTCGCGGGAGCAGCAAGCGCAAGGGAACGGGGCTGGA GCTGAGCCGCTGGGCTTCGGCCCCGCCGCGTCGCGAGGTGCCCGCGCTGCTCGCGGCCTACGCCGAGATGCCGTGGCTGG GAACCATCGTCGATACGGTGGGCGATGCCTTCGCGGACGTGACGTGGCGGGCCTTCACCCGGCAGGACCCAACGACGCGG AAGTCGCTGGTCGACGTGTCGCTGCGGCGGGCCTGTGGCGACGTGCGCCGGGAGCGGTTGAAGTCGCTCGTCGAGACGGG GGACGCGGTGGAGCTGCCCGACCATCCGCTGCTGCGGCTGCTGGCGGACCCGAACGACTACATGACGGGCCGCGACTTCG CGAAGCTCTTCTGTCTGCACTATGACTTGACGGGCGAGTTCTTCGCTGTCGTCGAAGAGCTGGCGGGCGTGCCCGTAGGC CTGTGGCCGGTGCCGCCCGATTGCGTCCTCGCGCTGCCGGACCTGAGCAAGCCGAAGTCGGAGCGCACTTACACGGTGGC CGCTGGCGGGCGGACATTCCTCCTGCCTGCGGCGAGCGTCATCTACGTGAAGCGATTGAATCCGGCTGACCCGCTTGGCC GCGGTATCGGCATCGCCTACTCGCTGGGCGACGAAGTCGACACGGACGAGCACGCGGCGCGCTTCACGAAGAACGCCTTC TTCAACAACATGCTTCCGGGCGCCGTCATCGCGATTGAGGGCTTCAACGAGTCGCAGGCCGGGCCCGCGAGGGCCTTCAA AGAGTCGCTCGCGCGTGAGTACGGGGGCCCCGCCAACGCAGGCCGGGTGATGATTACGAGCGGGCGGACGACGTTTGCCC GGCTCGACACGCCCTTCCGCGACATGCAGCTCGTCGACCTGCGCCGCTTCCTCATGGACTTCGTGCGGATGGTGTACCGG GTGCCGCCGGAGATTGTGGGCGACGTGACGAGCAGCAATAAGGCGACCAGCTACGCGGCGCGAGAGCACCTTGCCGAACA GGCGACGAAGCCGCGCGCCGAAGTCTTTCTCGCGTCGATGCAGAAGCACCTGGCACCCCGCTTCGAAGACGACGTGCTTC TCTCCTACGACTCCCCCGTGCCTGCCGACCGTGAGCACCGGCTGCGGGTGATGGGGACGCTCCCGAGCGCCTTCACCTTC GACGAGTGGCGAGTCGAAGCGGGCTTCAAGCCTCACCCGGAGCGGCAAGGTTTCGCGGAGCTGCTTCCGGGTCAGAAGCC CAACGAGCCCGGCGAGACGCCGACGCCCGTCGAAGGCAGCTCGGCGGAAGCGCATGCCGAGGCGACGAAGGACGGCTGA
Upstream 100 bases:
>100_bases TCAGCAAGTTCACCGGCATCAACGGGCGTCGCGACGACAGGGCCGACGCCTTCTGTTGGGGCGTTCATGACTTGGTCTTC GTCGAACAGTTCTTCGCGGT
Downstream 100 bases:
>100_bases GCCATTCGCAGAAGTCACACGCATTTACCGGGTGCATGACTGGCCCCATTACACGCTCCCTGCGGCTGAGCGCCGTTCGA AAGGACGCGGCGACGTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MRFSMGMLDRMRAAFRGSSKRKGTGLELSRWASAPPRREVPALLAAYAEMPWLGTIVDTVGDAFADVTWRAFTRQDPTTR KSLVDVSLRRACGDVRRERLKSLVETGDAVELPDHPLLRLLADPNDYMTGRDFAKLFCLHYDLTGEFFAVVEELAGVPVG LWPVPPDCVLALPDLSKPKSERTYTVAAGGRTFLLPAASVIYVKRLNPADPLGRGIGIAYSLGDEVDTDEHAARFTKNAF FNNMLPGAVIAIEGFNESQAGPARAFKESLAREYGGPANAGRVMITSGRTTFARLDTPFRDMQLVDLRRFLMDFVRMVYR VPPEIVGDVTSSNKATSYAAREHLAEQATKPRAEVFLASMQKHLAPRFEDDVLLSYDSPVPADREHRLRVMGTLPSAFTF DEWRVEAGFKPHPERQGFAELLPGQKPNEPGETPTPVEGSSAEAHAEATKDG
Sequences:
>Translated_452_residues MRFSMGMLDRMRAAFRGSSKRKGTGLELSRWASAPPRREVPALLAAYAEMPWLGTIVDTVGDAFADVTWRAFTRQDPTTR KSLVDVSLRRACGDVRRERLKSLVETGDAVELPDHPLLRLLADPNDYMTGRDFAKLFCLHYDLTGEFFAVVEELAGVPVG LWPVPPDCVLALPDLSKPKSERTYTVAAGGRTFLLPAASVIYVKRLNPADPLGRGIGIAYSLGDEVDTDEHAARFTKNAF FNNMLPGAVIAIEGFNESQAGPARAFKESLAREYGGPANAGRVMITSGRTTFARLDTPFRDMQLVDLRRFLMDFVRMVYR VPPEIVGDVTSSNKATSYAAREHLAEQATKPRAEVFLASMQKHLAPRFEDDVLLSYDSPVPADREHRLRVMGTLPSAFTF DEWRVEAGFKPHPERQGFAELLPGQKPNEPGETPTPVEGSSAEAHAEATKDG >Mature_452_residues MRFSMGMLDRMRAAFRGSSKRKGTGLELSRWASAPPRREVPALLAAYAEMPWLGTIVDTVGDAFADVTWRAFTRQDPTTR KSLVDVSLRRACGDVRRERLKSLVETGDAVELPDHPLLRLLADPNDYMTGRDFAKLFCLHYDLTGEFFAVVEELAGVPVG LWPVPPDCVLALPDLSKPKSERTYTVAAGGRTFLLPAASVIYVKRLNPADPLGRGIGIAYSLGDEVDTDEHAARFTKNAF FNNMLPGAVIAIEGFNESQAGPARAFKESLAREYGGPANAGRVMITSGRTTFARLDTPFRDMQLVDLRRFLMDFVRMVYR VPPEIVGDVTSSNKATSYAAREHLAEQATKPRAEVFLASMQKHLAPRFEDDVLLSYDSPVPADREHRLRVMGTLPSAFTF DEWRVEAGFKPHPERQGFAELLPGQKPNEPGETPTPVEGSSAEAHAEATKDG
Specific function: Unknown
COG id: COG4695
COG function: function code S; Phage-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49899; Mature: 49899
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSMGMLDRMRAAFRGSSKRKGTGLELSRWASAPPRREVPALLAAYAEMPWLGTIVDTV CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH GDAFADVTWRAFTRQDPTTRKSLVDVSLRRACGDVRRERLKSLVETGDAVELPDHPLLRL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LADPNDYMTGRDFAKLFCLHYDLTGEFFAVVEELAGVPVGLWPVPPDCVLALPDLSKPKS HCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCHHHEEECCCCCCCCC ERTYTVAAGGRTFLLPAASVIYVKRLNPADPLGRGIGIAYSLGDEVDTDEHAARFTKNAF CCEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH FNNMLPGAVIAIEGFNESQAGPARAFKESLAREYGGPANAGRVMITSGRTTFARLDTPFR HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCHH DMQLVDLRRFLMDFVRMVYRVPPEIVGDVTSSNKATSYAAREHLAEQATKPRAEVFLASM HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH QKHLAPRFEDDVLLSYDSPVPADREHRLRVMGTLPSAFTFDEWRVEAGFKPHPERQGFAE HHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCHHH LLPGQKPNEPGETPTPVEGSSAEAHAEATKDG HCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC >Mature Secondary Structure MRFSMGMLDRMRAAFRGSSKRKGTGLELSRWASAPPRREVPALLAAYAEMPWLGTIVDTV CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHH GDAFADVTWRAFTRQDPTTRKSLVDVSLRRACGDVRRERLKSLVETGDAVELPDHPLLRL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH LADPNDYMTGRDFAKLFCLHYDLTGEFFAVVEELAGVPVGLWPVPPDCVLALPDLSKPKS HCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEECCCCCHHHEEECCCCCCCCC ERTYTVAAGGRTFLLPAASVIYVKRLNPADPLGRGIGIAYSLGDEVDTDEHAARFTKNAF CCEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH FNNMLPGAVIAIEGFNESQAGPARAFKESLAREYGGPANAGRVMITSGRTTFARLDTPFR HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCHH DMQLVDLRRFLMDFVRMVYRVPPEIVGDVTSSNKATSYAAREHLAEQATKPRAEVFLASM HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH QKHLAPRFEDDVLLSYDSPVPADREHRLRVMGTLPSAFTFDEWRVEAGFKPHPERQGFAE HHHCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHEECCCCCCCCCCCCHHH LLPGQKPNEPGETPTPVEGSSAEAHAEATKDG HCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA