| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yvrH [H]
Identifier: 108759656
GI number: 108759656
Start: 833523
End: 833933
Strand: Reverse
Name: yvrH [H]
Synonym: MXAN_0732
Alternate gene names: 108759656
Gene position: 833933-833523 (Counterclockwise)
Preceding gene: 108758870
Following gene: 108761141
Centisome position: 9.12
GC content: 64.72
Gene sequence:
>411_bases ATGTCTGAAGAAAAAGCGCGCGTCCTGGTGGTGGACGACGACCCGGACCTGCTCGACCTCGTACAGCGCTCGCTGAGCGC CTACGGCTTCGAGGTGCTCACGCACACCTCCGCGCTGGGTGTCTCCAACCTCGTCCGCTCGGTGGAGCCGGACTTCGTCC TCATCGACGTGAACTTCCCCGCGCTCAAGGGTGACAAGGTCGTCAACCTGGCGCGCCAGTACGCGCTGCCGAAGACGAAG TTCATCCTCTATTCAGCATCCGACGAATCGAAGCTGCGCTCACTGGCGCTCGCGTCCGGTGCGGACGGATATATCTCTAA AAGCGTGCAGGGCGAGGAGCTGGCACAGCGCCTGCGCGCCTTCCACCTGAAGCCCCGGCCGCCCACACCGACGCCCGCTC CCACCAGCTGA
Upstream 100 bases:
>100_bases CAGGACAAGGCACACGCGGCCGGTTGCACCGCGTATCTCACCAAGCCCCTTGATCGTGACCAGTTGCTCGAGATGATTCG AAAGCATCTAGGGAGAACCC
Downstream 100 bases:
>100_bases ACGCCGGATGACATGCCCGCGGGTCCCGTTGGGACGGGGCCCGCGATTCCACACCTTCCGAGCTCCCCCCACTCAGGAGG GCCGTATGAGCGCGTCCATC
Product: response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSEEKARVLVVDDDPDLLDLVQRSLSAYGFEVLTHTSALGVSNLVRSVEPDFVLIDVNFPALKGDKVVNLARQYALPKTK FILYSASDESKLRSLALASGADGYISKSVQGEELAQRLRAFHLKPRPPTPTPAPTS
Sequences:
>Translated_136_residues MSEEKARVLVVDDDPDLLDLVQRSLSAYGFEVLTHTSALGVSNLVRSVEPDFVLIDVNFPALKGDKVVNLARQYALPKTK FILYSASDESKLRSLALASGADGYISKSVQGEELAQRLRAFHLKPRPPTPTPAPTS >Mature_135_residues SEEKARVLVVDDDPDLLDLVQRSLSAYGFEVLTHTSALGVSNLVRSVEPDFVLIDVNFPALKGDKVVNLARQYALPKTKF ILYSASDESKLRSLALASGADGYISKSVQGEELAQRLRAFHLKPRPPTPTPAPTS
Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 14838; Mature: 14707
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEEKARVLVVDDDPDLLDLVQRSLSAYGFEVLTHTSALGVSNLVRSVEPDFVLIDVNFP CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC ALKGDKVVNLARQYALPKTKFILYSASDESKLRSLALASGADGYISKSVQGEELAQRLRA CCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH FHLKPRPPTPTPAPTS HCCCCCCCCCCCCCCC >Mature Secondary Structure SEEKARVLVVDDDPDLLDLVQRSLSAYGFEVLTHTSALGVSNLVRSVEPDFVLIDVNFP CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC ALKGDKVVNLARQYALPKTKFILYSASDESKLRSLALASGADGYISKSVQGEELAQRLRA CCCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH FHLKPRPPTPTPAPTS HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]