| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759642
Identifier: 108759642
GI number: 108759642
Start: 3047379
End: 3048311
Strand: Direct
Name: 108759642
Synonym: MXAN_2613
Alternate gene names: NA
Gene position: 3047379-3048311 (Clockwise)
Preceding gene: 108760853
Following gene: 108762148
Centisome position: 33.34
GC content: 70.1
Gene sequence:
>933_bases ATGCCGGAACCCCTACTTGTCGCGGCCGTGGGCGACATCCATGGCCGCTTCCACCGTGTGGAGACGTGGCTGGACGCGCT TGAGCAGGCTCGTGGCCGCCGGGTGGACCTGGTGCTGGCGGTGGGCGACGTCGAAGCCTTCCGCCGCTCGGATGACCACC GGCGCAAGGCCGCCAAGCGAGCCATGCCCGCCGAGTTCGCGGAATACGCGGATGGACTCCGGCAAGTGAAGCGGCCCCTG TACTTCATCGGGGGTAACAACGAGGACTTCGAGGCGCTGCACGACCTCCAACTGGGCGGCACGCTGGCGCCGAACGTGAC GTACCTGGGCCGAGCCGGGGTTCGCGAGCTGTGCGGACTGCGGGTGGCGTACCTGTCAGGCATCCACGCGCCGCGCTTCG TCGACCAGCCACTGAAGCCACCCTCCACGCCGGACATGGTGAAGCAGGCCGGCTACTTCCGCACGCCGGAGGTCGAACAG GTGGCGGAGCTCCGCGACGTGGACCTGATGCTGGTCCACGAATGGCCGCGAGGCATCGTCCAGCGCGCGCGGGAGGAGAA CCCGTCACCGCCAAGGCCGCTCCCCTCTTATTGGATTGGCAATCCCGTGACGCGGCGGCTCGTGGACACGGTGTTGCCGA AGTGGATGCTGTGCGGCCACTCGCACAAGGGCTTCGCGGTGACGCTGGAGGGCCCGGGACGTCCGGCCACCCGCATCGCC TGCCTGGACCAGGCGGCCAGGGCCCAGGAGTCCATCTTCTGGTTGGAGTACGAGGACCGTCAGGCCCTGCGCGCGGGCTG GGGCCTGTCGGGCGCCATCTCGTGGACCGCCGGCCAGCGCTGGGACATGAACTCGCTGCCCCCGCTGGCCGCGGAGGGAG AGGGCGCCCCCGCGGAGTTCGGCCTCGGAGAGGCGATGCCGGCGCGGAACTAG
Upstream 100 bases:
>100_bases GGTTCGGCCGCCCGGGGAGGTTGCGTTCTGTCAGGCATTGGCGACATGAGATGATCTCGACTCGACAGGGCGGTACGGCG CGTGCAGCCTTTCAAGCAAG
Downstream 100 bases:
>100_bases AAGGTGCCGGAGATGCCCATCATCCGCGCGCTGGCCACGGGCGCCATCTGGATCTGCCCTGACTGGATGTCCGGCGAGGC CTCGCCCTTCCGGCCATGGA
Product: serine/threonine protein phosphatase family protein
Products: NA
Alternate protein names: Serine/Threonine Protein Phosphatase Family Protein; RNA Lariat Debranching
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPEPLLVAAVGDIHGRFHRVETWLDALEQARGRRVDLVLAVGDVEAFRRSDDHRRKAAKRAMPAEFAEYADGLRQVKRPL YFIGGNNEDFEALHDLQLGGTLAPNVTYLGRAGVRELCGLRVAYLSGIHAPRFVDQPLKPPSTPDMVKQAGYFRTPEVEQ VAELRDVDLMLVHEWPRGIVQRAREENPSPPRPLPSYWIGNPVTRRLVDTVLPKWMLCGHSHKGFAVTLEGPGRPATRIA CLDQAARAQESIFWLEYEDRQALRAGWGLSGAISWTAGQRWDMNSLPPLAAEGEGAPAEFGLGEAMPARN
Sequences:
>Translated_310_residues MPEPLLVAAVGDIHGRFHRVETWLDALEQARGRRVDLVLAVGDVEAFRRSDDHRRKAAKRAMPAEFAEYADGLRQVKRPL YFIGGNNEDFEALHDLQLGGTLAPNVTYLGRAGVRELCGLRVAYLSGIHAPRFVDQPLKPPSTPDMVKQAGYFRTPEVEQ VAELRDVDLMLVHEWPRGIVQRAREENPSPPRPLPSYWIGNPVTRRLVDTVLPKWMLCGHSHKGFAVTLEGPGRPATRIA CLDQAARAQESIFWLEYEDRQALRAGWGLSGAISWTAGQRWDMNSLPPLAAEGEGAPAEFGLGEAMPARN >Mature_309_residues PEPLLVAAVGDIHGRFHRVETWLDALEQARGRRVDLVLAVGDVEAFRRSDDHRRKAAKRAMPAEFAEYADGLRQVKRPLY FIGGNNEDFEALHDLQLGGTLAPNVTYLGRAGVRELCGLRVAYLSGIHAPRFVDQPLKPPSTPDMVKQAGYFRTPEVEQV AELRDVDLMLVHEWPRGIVQRAREENPSPPRPLPSYWIGNPVTRRLVDTVLPKWMLCGHSHKGFAVTLEGPGRPATRIAC LDQAARAQESIFWLEYEDRQALRAGWGLSGAISWTAGQRWDMNSLPPLAAEGEGAPAEFGLGEAMPARN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI56549113, Length=337, Percent_Identity=27.299703264095, Blast_Score=100, Evalue=3e-21, Organism=Caenorhabditis elegans, GI25145810, Length=261, Percent_Identity=30.6513409961686, Blast_Score=98, Evalue=5e-21, Organism=Saccharomyces cerevisiae, GI6322700, Length=246, Percent_Identity=25.609756097561, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI45552991, Length=230, Percent_Identity=29.1304347826087, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI24660629, Length=230, Percent_Identity=29.1304347826087, Blast_Score=98, Evalue=7e-21, Organism=Drosophila melanogaster, GI45550410, Length=225, Percent_Identity=24.4444444444444, Blast_Score=66, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34494; Mature: 34362
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPLLVAAVGDIHGRFHRVETWLDALEQARGRRVDLVLAVGDVEAFRRSDDHRRKAAKR CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHCCCHHHHHHHHH AMPAEFAEYADGLRQVKRPLYFIGGNNEDFEALHDLQLGGTLAPNVTYLGRAGVRELCGL CCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHH RVAYLSGIHAPRFVDQPLKPPSTPDMVKQAGYFRTPEVEQVAELRDVDLMLVHEWPRGIV HHHHHHCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHH QRAREENPSPPRPLPSYWIGNPVTRRLVDTVLPKWMLCGHSHKGFAVTLEGPGRPATRIA HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH CLDQAARAQESIFWLEYEDRQALRAGWGLSGAISWTAGQRWDMNSLPPLAAEGEGAPAEF HHHHHHHHHHCEEEEEECCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC GLGEAMPARN CCCCCCCCCC >Mature Secondary Structure PEPLLVAAVGDIHGRFHRVETWLDALEQARGRRVDLVLAVGDVEAFRRSDDHRRKAAKR CCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHCCCHHHHHHHHH AMPAEFAEYADGLRQVKRPLYFIGGNNEDFEALHDLQLGGTLAPNVTYLGRAGVRELCGL CCCHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCCHHHCHHHHHHHHHH RVAYLSGIHAPRFVDQPLKPPSTPDMVKQAGYFRTPEVEQVAELRDVDLMLVHEWPRGIV HHHHHHCCCCCHHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEHHHHHHH QRAREENPSPPRPLPSYWIGNPVTRRLVDTVLPKWMLCGHSHKGFAVTLEGPGRPATRIA HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHH CLDQAARAQESIFWLEYEDRQALRAGWGLSGAISWTAGQRWDMNSLPPLAAEGEGAPAEF HHHHHHHHHHCEEEEEECCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCC GLGEAMPARN CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA