| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759509
Identifier: 108759509
GI number: 108759509
Start: 2562763
End: 2564505
Strand: Reverse
Name: 108759509
Synonym: MXAN_2223
Alternate gene names: NA
Gene position: 2564505-2562763 (Counterclockwise)
Preceding gene: 108758885
Following gene: 108757896
Centisome position: 28.06
GC content: 68.67
Gene sequence:
>1743_bases ATGGACCTCATCGTCGAGAACGGCCTCGTATTCGATGGTCTGGGCAATCCCCCGCGCAAGCTCCATGTGGGCATCCGGGG AAACACTGTCACCACGCTTTCGGAAGCACCGATTCCGCGCGCCCCACATACGCGTGTCATCGACGCCACCGGCCACTGGG TGACACCAGGCTTCATCGACTGCCACACGCACTACGACGCGGAGGTGGAGCTGGCGCCCTCGCTGTCGGAGTCCGTACGA CACGGCGTCACCACGGTGCTGATGGGAAGCTGCTCGCTCAGCCTCGCGCTGGGCACGCCCGAGGACCTGGCGGACATGTT CTGCCGCGTGGAGGCCATTCCCTACGAGACTGTCCGGTCGCTGCTGGAGGAGCGCAAGACGTGGAACACGCTCGGTGACT ACCTGACGCACCTGGAGCAATTGCCGCTGGGCCCCCATGTCGCGTCCTTCCTGGGGCACTCCGCGCTGCGAGCCCACACC ATGGGCCTGCACCGCAGCCTGGAGCCCGGCCTGCGCCCACGGGAGGACGAGCTGCGCGCCATGGAGTCCCTGGTGCGCGA AGGGCTCGAGCTCGGCTACGTGGGCCTGTCCATCATGACGCTCAAATGGGACAAGATGGGCGGCTCGCGCGACATCCGCA GCCGCCCCCTGCCGTCCACCTATGCCCGCTGGAGCGAATACCGCCGCCTGACGCGGCTGCTCCGCGAACGAGGCCGTGTA TTCCAGGGCGTGCCCAACATCAGCACCAAGGTGAACGTGGTGCTGTTCTTCCTGGAGAGCGTCGGGTTGTTCCGCCCGAG CCTCAAGACGACCGTCATCTCGATGATGGACACGCGCGCCAACCGGGGCATCCACCGCCTCATCGGCGTGCTGTCCCAGG TGGCCAACCGGCTGCTGGGGGCGGACTTCCGGTGGCAGGCCCTGCCCGAAATCTTCGACCTCTGGGCGGACGGCATCGAC CTGGTCGTCTTCGAGGAGTTCGGCGCGGGTGCGGCTGCCCTTCACCTCCAGGACGCAGCCTCACGCGCGGGGCTGCTGCG AACGCCGGAGTACCGCAGCCGCTTCCGCCGCGAGTGGACGAACCGCTTCCTGCCGCGGGCCTTCCACCGGGACTTCAACG AGTCGCGCATCCTCCAGTGCCCCGACGCCAGCGTGGTGGGCAAGTCCTTCGCCCAGGTGGCGAAGGAGCAGGGGCGTGAC GCGGTGGACGTCTTCCTGGATCTCATCTCCACCCACGGAGACGCCCTGCGCTGGTACACGGTGATGGCCAACGACCGGCG CGAGGAGCTGGAGCGCATCTGCCGGCATCCGGACATCCTCATGGGCTTCTCGGACGCCGGGGCGCACCTGCGCAACATGG CGCACTACAACTTCCCCCTGCGGCTGCTGCGGCTGGTGCGCGAGGCGGAGAAGCGCGGCGAGCCCTTCATGAGCGTGGAG CGCGCCGTCCACCGGCTGACCGGGGAACTGGCCGGGTGGTTCGGCCTGGATGCGGGCGTGCTCGCGGAGGGCCGCCGCGC GGACCTGGTGGTCATCCAGCCCGACGGCCTGGACGCGAAGCTCGACAAGGTGGCCGAGGCGCCCATGGAGAACTTCGGGG GATTCGTCCGCCTGGTCAACCGCAACGACGCCGCGGTGAAGGCGGTGCTCATCTCCGGGCGCGAAGCGGTGAATGAAGCC GGCGTGTCTCCCGCCTTGGGCCGCGAGCGCGGCTTCGGCGGCGTGCTGCGCGTCCAGGCTTGA
Upstream 100 bases:
>100_bases TGCGCCCAGGCAATGACATCCACGCTGGCATGTGCGGGAGAGAACTGTCGGCGCGTCTTCTGGCTGGAAGCTGACACTCG ACGGTGCCTAGGCTCTGTGC
Downstream 100 bases:
>100_bases GGCTCGGGGCACGCCGGACCTGGAATCAAGGCGTGGTGGCCCGCTACTGCGCCAGGACTGCTGGGCGCCAATCTCTCCCA GGCTGCCCACGGCCCTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MDLIVENGLVFDGLGNPPRKLHVGIRGNTVTTLSEAPIPRAPHTRVIDATGHWVTPGFIDCHTHYDAEVELAPSLSESVR HGVTTVLMGSCSLSLALGTPEDLADMFCRVEAIPYETVRSLLEERKTWNTLGDYLTHLEQLPLGPHVASFLGHSALRAHT MGLHRSLEPGLRPREDELRAMESLVREGLELGYVGLSIMTLKWDKMGGSRDIRSRPLPSTYARWSEYRRLTRLLRERGRV FQGVPNISTKVNVVLFFLESVGLFRPSLKTTVISMMDTRANRGIHRLIGVLSQVANRLLGADFRWQALPEIFDLWADGID LVVFEEFGAGAAALHLQDAASRAGLLRTPEYRSRFRREWTNRFLPRAFHRDFNESRILQCPDASVVGKSFAQVAKEQGRD AVDVFLDLISTHGDALRWYTVMANDRREELERICRHPDILMGFSDAGAHLRNMAHYNFPLRLLRLVREAEKRGEPFMSVE RAVHRLTGELAGWFGLDAGVLAEGRRADLVVIQPDGLDAKLDKVAEAPMENFGGFVRLVNRNDAAVKAVLISGREAVNEA GVSPALGRERGFGGVLRVQA
Sequences:
>Translated_580_residues MDLIVENGLVFDGLGNPPRKLHVGIRGNTVTTLSEAPIPRAPHTRVIDATGHWVTPGFIDCHTHYDAEVELAPSLSESVR HGVTTVLMGSCSLSLALGTPEDLADMFCRVEAIPYETVRSLLEERKTWNTLGDYLTHLEQLPLGPHVASFLGHSALRAHT MGLHRSLEPGLRPREDELRAMESLVREGLELGYVGLSIMTLKWDKMGGSRDIRSRPLPSTYARWSEYRRLTRLLRERGRV FQGVPNISTKVNVVLFFLESVGLFRPSLKTTVISMMDTRANRGIHRLIGVLSQVANRLLGADFRWQALPEIFDLWADGID LVVFEEFGAGAAALHLQDAASRAGLLRTPEYRSRFRREWTNRFLPRAFHRDFNESRILQCPDASVVGKSFAQVAKEQGRD AVDVFLDLISTHGDALRWYTVMANDRREELERICRHPDILMGFSDAGAHLRNMAHYNFPLRLLRLVREAEKRGEPFMSVE RAVHRLTGELAGWFGLDAGVLAEGRRADLVVIQPDGLDAKLDKVAEAPMENFGGFVRLVNRNDAAVKAVLISGREAVNEA GVSPALGRERGFGGVLRVQA >Mature_580_residues MDLIVENGLVFDGLGNPPRKLHVGIRGNTVTTLSEAPIPRAPHTRVIDATGHWVTPGFIDCHTHYDAEVELAPSLSESVR HGVTTVLMGSCSLSLALGTPEDLADMFCRVEAIPYETVRSLLEERKTWNTLGDYLTHLEQLPLGPHVASFLGHSALRAHT MGLHRSLEPGLRPREDELRAMESLVREGLELGYVGLSIMTLKWDKMGGSRDIRSRPLPSTYARWSEYRRLTRLLRERGRV FQGVPNISTKVNVVLFFLESVGLFRPSLKTTVISMMDTRANRGIHRLIGVLSQVANRLLGADFRWQALPEIFDLWADGID LVVFEEFGAGAAALHLQDAASRAGLLRTPEYRSRFRREWTNRFLPRAFHRDFNESRILQCPDASVVGKSFAQVAKEQGRD AVDVFLDLISTHGDALRWYTVMANDRREELERICRHPDILMGFSDAGAHLRNMAHYNFPLRLLRLVREAEKRGEPFMSVE RAVHRLTGELAGWFGLDAGVLAEGRRADLVVIQPDGLDAKLDKVAEAPMENFGGFVRLVNRNDAAVKAVLISGREAVNEA GVSPALGRERGFGGVLRVQA
Specific function: Unknown
COG id: COG3653
COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 64750; Mature: 64750
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIVENGLVFDGLGNPPRKLHVGIRGNTVTTLSEAPIPRAPHTRVIDATGHWVTPGFID CCEEEECCEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEE CHTHYDAEVELAPSLSESVRHGVTTVLMGSCSLSLALGTPEDLADMFCRVEAIPYETVRS ECCCCCCCEEECCCHHHHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHHCCCHHHHHH LLEERKTWNTLGDYLTHLEQLPLGPHVASFLGHSALRAHTMGLHRSLEPGLRPREDELRA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH MESLVREGLELGYVGLSIMTLKWDKMGGSRDIRSRPLPSTYARWSEYRRLTRLLRERGRV HHHHHHCCHHCCEECEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHH FQGVPNISTKVNVVLFFLESVGLFRPSLKTTVISMMDTRANRGIHRLIGVLSQVANRLLG HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC ADFRWQALPEIFDLWADGIDLVVFEEFGAGAAALHLQDAASRAGLLRTPEYRSRFRREWT CCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHH NRFLPRAFHRDFNESRILQCPDASVVGKSFAQVAKEQGRDAVDVFLDLISTHGDALRWYT HHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEE VMANDRREELERICRHPDILMGFSDAGAHLRNMAHYNFPLRLLRLVREAEKRGEPFMSVE EECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH RAVHRLTGELAGWFGLDAGVLAEGRRADLVVIQPDGLDAKLDKVAEAPMENFGGFVRLVN HHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHCCHHHCCCEEEEEC RNDAAVKAVLISGREAVNEAGVSPALGRERGFGGVLRVQA CCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MDLIVENGLVFDGLGNPPRKLHVGIRGNTVTTLSEAPIPRAPHTRVIDATGHWVTPGFID CCEEEECCEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCEEEECCCCCCCCCEEE CHTHYDAEVELAPSLSESVRHGVTTVLMGSCSLSLALGTPEDLADMFCRVEAIPYETVRS ECCCCCCCEEECCCHHHHHHHHHHHHEEECCEEEEECCCCHHHHHHHHHHHCCCHHHHHH LLEERKTWNTLGDYLTHLEQLPLGPHVASFLGHSALRAHTMGLHRSLEPGLRPREDELRA HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH MESLVREGLELGYVGLSIMTLKWDKMGGSRDIRSRPLPSTYARWSEYRRLTRLLRERGRV HHHHHHCCHHCCEECEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHH FQGVPNISTKVNVVLFFLESVGLFRPSLKTTVISMMDTRANRGIHRLIGVLSQVANRLLG HCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC ADFRWQALPEIFDLWADGIDLVVFEEFGAGAAALHLQDAASRAGLLRTPEYRSRFRREWT CCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHCCCCCCHHHHHHHHHHHH NRFLPRAFHRDFNESRILQCPDASVVGKSFAQVAKEQGRDAVDVFLDLISTHGDALRWYT HHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEE VMANDRREELERICRHPDILMGFSDAGAHLRNMAHYNFPLRLLRLVREAEKRGEPFMSVE EECCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHH RAVHRLTGELAGWFGLDAGVLAEGRRADLVVIQPDGLDAKLDKVAEAPMENFGGFVRLVN HHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHCCHHHCCCEEEEEC RNDAAVKAVLISGREAVNEAGVSPALGRERGFGGVLRVQA CCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]