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The map label for this gene is glxA [H]

Identifier: 108759503

GI number: 108759503

Start: 1968387

End: 1969508

Strand: Direct

Name: glxA [H]

Synonym: MXAN_1667

Alternate gene names: 108759503

Gene position: 1968387-1969508 (Clockwise)

Preceding gene: 108759523

Following gene: 108762182

Centisome position: 21.54

GC content: 70.14

Gene sequence:

>1122_bases
GTGTGGATGGGCGCATGCCTGGACGATGCGGGAAGTCCATCCTCCGCGGCCAGTGGCGAGATTGACAATGAACGGGCTAT
TCTTGCCACTGTGATTACGCATGTGGTGTTCGATGGCGTGGCAGAGGGCTCGCTGGGCGTGGGGCTCGATGTGGTCGACA
CGGCCGCGCGACTCGTCGAGGCAGGGCTCGCCTCGGTTCCCCGGGGTGCCCAGGTCTTGCGTCAGCGGGTGGTGTCGCTC
GATGGTCAGCCGGTGCGCTCGGGCACGGGACGCACCGTCTCCGTGGACGGCGCGCTGAGCCTCCGAAGTGTGAAGGCTGG
AGACGTGTTGCTGGTCCCTGGGCTCTCCGCGGCCAGCGAGCGCGCCATCGAACAGTTGCTCTCTCGGGCCGATGCGGCGC
GTGGCATCACGTTGCTCGCGCGTGTGGCGGCGAAGGGCGCCATGGTCGCGGCCTCGTGCTCCGCGACCTTCGTCCTCGCG
GCGTCCGGCCTCCTCGCGGGGCGGAGCGCGACGACGACCTGGTGGCTCGTCCCTTCGTTCGTGCGTCGCTTCCCCGAGGT
CGCCCTCCAGCCGGACCGGATGGTTGTCGAGAGCGACGGCGTCCTCACCGCGGGCTCGGCCTTCGCGCATGCGGACCTGG
TGCTGGCCATCGTCGCGCGGGTCGCGAGCCCATCACTCGCGCACCTGGTGGCCCGCTACCTCGTGCTCGACGAGCGTGTC
TCACAGGCCAGGTACATGGTGATGGAGCACCTCCGCGTCTCGGACCCAGCGCTTCGTGCCGTGGAGCAATTCGTCGCCGC
GAATCTGGGCCGGCAACTGACGCTCGATGAACTCGCCCGGGCCGGTGCCACCTCCTCGCGCACGCTCGCGCGGCGGGTGC
AGGCGGGGCTGGGCATGACGCCGCTCGAGTTCGTGCAGCGGGTGCGCGTGGCTCACGCCTCCCACCTGCTCGAGACGACC
CATGCGTCGGTCGAAGATGTCGCTGCCCGGGTGGGGTATGCCGACACCGCTGCGTTCCGCCGCGTGTTCCGGCGGTACGT
CGGAGAGACGCCACGAGGAAGGCGCGGCAACTCGCGCTCCCGGCGCTCACCGCTGAACGCGCGCGATTCACCGGCGCCAT
GA

Upstream 100 bases:

>100_bases
GCGGGGCCGTGGCCGGCGACGTAGACCGTTCGCATGGCGTCGTTGAGGGTGAGGGGCCGCCGGGTGAAGTCATCGAGAGG
GTCGTCGGCCGTGGAGTCAG

Downstream 100 bases:

>100_bases
GGGCTTTCGCAGAGATGTCTTGCCCCAGCGCAGCGGGGCTGGCAGCGCAAACGCAGACGCCCCTTTGACCTTCCCGTCAA
CGGTGCGCTAATAGCTGCCA

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MWMGACLDDAGSPSSAASGEIDNERAILATVITHVVFDGVAEGSLGVGLDVVDTAARLVEAGLASVPRGAQVLRQRVVSL
DGQPVRSGTGRTVSVDGALSLRSVKAGDVLLVPGLSAASERAIEQLLSRADAARGITLLARVAAKGAMVAASCSATFVLA
ASGLLAGRSATTTWWLVPSFVRRFPEVALQPDRMVVESDGVLTAGSAFAHADLVLAIVARVASPSLAHLVARYLVLDERV
SQARYMVMEHLRVSDPALRAVEQFVAANLGRQLTLDELARAGATSSRTLARRVQAGLGMTPLEFVQRVRVAHASHLLETT
HASVEDVAARVGYADTAAFRRVFRRYVGETPRGRRGNSRSRRSPLNARDSPAP

Sequences:

>Translated_373_residues
MWMGACLDDAGSPSSAASGEIDNERAILATVITHVVFDGVAEGSLGVGLDVVDTAARLVEAGLASVPRGAQVLRQRVVSL
DGQPVRSGTGRTVSVDGALSLRSVKAGDVLLVPGLSAASERAIEQLLSRADAARGITLLARVAAKGAMVAASCSATFVLA
ASGLLAGRSATTTWWLVPSFVRRFPEVALQPDRMVVESDGVLTAGSAFAHADLVLAIVARVASPSLAHLVARYLVLDERV
SQARYMVMEHLRVSDPALRAVEQFVAANLGRQLTLDELARAGATSSRTLARRVQAGLGMTPLEFVQRVRVAHASHLLETT
HASVEDVAARVGYADTAAFRRVFRRYVGETPRGRRGNSRSRRSPLNARDSPAP
>Mature_373_residues
MWMGACLDDAGSPSSAASGEIDNERAILATVITHVVFDGVAEGSLGVGLDVVDTAARLVEAGLASVPRGAQVLRQRVVSL
DGQPVRSGTGRTVSVDGALSLRSVKAGDVLLVPGLSAASERAIEQLLSRADAARGITLLARVAAKGAMVAASCSATFVLA
ASGLLAGRSATTTWWLVPSFVRRFPEVALQPDRMVVESDGVLTAGSAFAHADLVLAIVARVASPSLAHLVARYLVLDERV
SQARYMVMEHLRVSDPALRAVEQFVAANLGRQLTLDELARAGATSSRTLARRVQAGLGMTPLEFVQRVRVAHASHLLETT
HASVEDVAARVGYADTAAFRRVFRRYVGETPRGRRGNSRSRRSPLNARDSPAP

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39312; Mature: 39312

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWMGACLDDAGSPSSAASGEIDNERAILATVITHVVFDGVAEGSLGVGLDVVDTAARLVE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
AGLASVPRGAQVLRQRVVSLDGQPVRSGTGRTVSVDGALSLRSVKAGDVLLVPGLSAASE
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHH
RAIEQLLSRADAARGITLLARVAAKGAMVAASCSATFVLAASGLLAGRSATTTWWLVPSF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCHHHHHHHHHHHHCCCCCCCCEEHHHHH
VRRFPEVALQPDRMVVESDGVLTAGSAFAHADLVLAIVARVASPSLAHLVARYLVLDERV
HHHHHHHHCCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SQARYMVMEHLRVSDPALRAVEQFVAANLGRQLTLDELARAGATSSRTLARRVQAGLGMT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC
PLEFVQRVRVAHASHLLETTHASVEDVAARVGYADTAAFRRVFRRYVGETPRGRRGNSRS
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
RRSPLNARDSPAP
CCCCCCCCCCCCC
>Mature Secondary Structure
MWMGACLDDAGSPSSAASGEIDNERAILATVITHVVFDGVAEGSLGVGLDVVDTAARLVE
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
AGLASVPRGAQVLRQRVVSLDGQPVRSGTGRTVSVDGALSLRSVKAGDVLLVPGLSAASE
HHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEECCCCHHHH
RAIEQLLSRADAARGITLLARVAAKGAMVAASCSATFVLAASGLLAGRSATTTWWLVPSF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHCHHHHHHHHHHHHCCCCCCCCEEHHHHH
VRRFPEVALQPDRMVVESDGVLTAGSAFAHADLVLAIVARVASPSLAHLVARYLVLDERV
HHHHHHHHCCCCCEEEECCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SQARYMVMEHLRVSDPALRAVEQFVAANLGRQLTLDELARAGATSSRTLARRVQAGLGMT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCC
PLEFVQRVRVAHASHLLETTHASVEDVAARVGYADTAAFRRVFRRYVGETPRGRRGNSRS
HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
RRSPLNARDSPAP
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]