| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yhbW [H]
Identifier: 108759470
GI number: 108759470
Start: 6366114
End: 6367130
Strand: Direct
Name: yhbW [H]
Synonym: MXAN_5094
Alternate gene names: 108759470
Gene position: 6366114-6367130 (Clockwise)
Preceding gene: 108762668
Following gene: 108761198
Centisome position: 69.65
GC content: 69.32
Gene sequence:
>1017_bases ATGATTCCTTTCTCCGTCCTCGACCTCTCGCCCGTCACGCAGGGCTCCACCGCGGCCGACGCGCTCCGGAACACGCTGGA CCTGGCACGGCACGCGGAGGACTGGGGCTTCAAGCGCTTCTGGCTGGCCGAGCACCACAACATGACGGGCATCGCCAGCG CGGCGACGTCCGTGGTCATCGGCTACGTGGCCGGAGGGACGAAGCGCATCCGCGTGGGTTCGGGCGGCGTCATGCTGCCG AATCACGCGCCGCTGATCATCGCGGAGCAGTTCGGCACGCTGGAGACGCTCTACCCGGGGCGCATCGACCTGGGGCTCGG CCGGGCGCCGGGCACGGACATGCTGACGGCGCGCGCCCTGCGGCGGGACCTGGCGGCGAGCGCGGACACCTTCCCCCAGG ACGTCGTGGAGCTGAAGTCGTACTTCGAGCCCACCGAGCCGGGGCAGCTCATCCAGGCGGTGCCGGGCGCGGGTTTGAAG GTGCCCATCTGGCTACTCGGCTCCAGCCTGTTCAGCGCGCAGCTCGCGGCGATGCTGGGCATGCCGTTCGCCTTCGCCTC CCACTTCGCGCCCGATGCCCTGCTTCAGGCCCTGGACATCTACCGGGAGCGCTTCAAGCCGTCCGAGTCGCTCGAGCGGC CCTACGCCATGGCCTGTGTGAATGTCTTCGCGGCGGATACGGATGCGGAGGCACAGCGCCTCTTCACTTCGGTGCAGCAG CAGTTCATCCGCCTGCGCCGCGGCACGCCCGGTCAGCTCCCGCCCCCGGTCGATGACATCGACTCCGTGGCTTCGCCCTT GGACCGCGCGAGCGCCGACCACGCGTTGAAGTACTCCATCATCGGCGCGCCCGACACCGTTCAACAGGGTCTGGCGGCGT TCATTCGACTCACGGGAGTCGATGAGCTGATGGTGACGGGAATGGTCTACGACCACGCCGCACGGCTGCGCTCCTTCGAG CTGACTGCGCAGGCGCACCAGCGGCTCGCCGAGGCAGAAGCGGCGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases GTCCAGGTGCTGCACCCGGCGGCGCATGGCACCAAGGGGACGCGGCATACTCTGTTCATGGGCAAGCGGAGGCCCCAGGG GCGGCGTTAGTAGGGGCCCC
Downstream 100 bases:
>100_bases AGAACCGCCCGCGCCCTCCTCCCAGGCGGAGCGTGAAACACCGCGTCTGTGGCAATGAACGACACACACGCCTCCGCCCT GTAGCGGAACGCGCTACACG
Product: luciferase-like monooxygenase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MIPFSVLDLSPVTQGSTAADALRNTLDLARHAEDWGFKRFWLAEHHNMTGIASAATSVVIGYVAGGTKRIRVGSGGVMLP NHAPLIIAEQFGTLETLYPGRIDLGLGRAPGTDMLTARALRRDLAASADTFPQDVVELKSYFEPTEPGQLIQAVPGAGLK VPIWLLGSSLFSAQLAAMLGMPFAFASHFAPDALLQALDIYRERFKPSESLERPYAMACVNVFAADTDAEAQRLFTSVQQ QFIRLRRGTPGQLPPPVDDIDSVASPLDRASADHALKYSIIGAPDTVQQGLAAFIRLTGVDELMVTGMVYDHAARLRSFE LTAQAHQRLAEAEAAQPA
Sequences:
>Translated_338_residues MIPFSVLDLSPVTQGSTAADALRNTLDLARHAEDWGFKRFWLAEHHNMTGIASAATSVVIGYVAGGTKRIRVGSGGVMLP NHAPLIIAEQFGTLETLYPGRIDLGLGRAPGTDMLTARALRRDLAASADTFPQDVVELKSYFEPTEPGQLIQAVPGAGLK VPIWLLGSSLFSAQLAAMLGMPFAFASHFAPDALLQALDIYRERFKPSESLERPYAMACVNVFAADTDAEAQRLFTSVQQ QFIRLRRGTPGQLPPPVDDIDSVASPLDRASADHALKYSIIGAPDTVQQGLAAFIRLTGVDELMVTGMVYDHAARLRSFE LTAQAHQRLAEAEAAQPA >Mature_338_residues MIPFSVLDLSPVTQGSTAADALRNTLDLARHAEDWGFKRFWLAEHHNMTGIASAATSVVIGYVAGGTKRIRVGSGGVMLP NHAPLIIAEQFGTLETLYPGRIDLGLGRAPGTDMLTARALRRDLAASADTFPQDVVELKSYFEPTEPGQLIQAVPGAGLK VPIWLLGSSLFSAQLAAMLGMPFAFASHFAPDALLQALDIYRERFKPSESLERPYAMACVNVFAADTDAEAQRLFTSVQQ QFIRLRRGTPGQLPPPVDDIDSVASPLDRASADHALKYSIIGAPDTVQQGLAAFIRLTGVDELMVTGMVYDHAARLRSFE LTAQAHQRLAEAEAAQPA
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=328, Percent_Identity=58.5365853658537, Blast_Score=411, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 36408; Mature: 36408
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFSVLDLSPVTQGSTAADALRNTLDLARHAEDWGFKRFWLAEHHNMTGIASAATSVVI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHH GYVAGGTKRIRVGSGGVMLPNHAPLIIAEQFGTLETLYPGRIDLGLGRAPGTDMLTARAL HEECCCCEEEEECCCCEECCCCCCEEEECCCCCHHHCCCCCEEECCCCCCCHHHHHHHHH RRDLAASADTFPQDVVELKSYFEPTEPGQLIQAVPGAGLKVPIWLLGSSLFSAQLAAMLG HHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHC MPFAFASHFAPDALLQALDIYRERFKPSESLERPYAMACVNVFAADTDAEAQRLFTSVQQ CHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH QFIRLRRGTPGQLPPPVDDIDSVASPLDRASADHALKYSIIGAPDTVQQGLAAFIRLTGV HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCH DELMVTGMVYDHAARLRSFELTAQAHQRLAEAEAAQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIPFSVLDLSPVTQGSTAADALRNTLDLARHAEDWGFKRFWLAEHHNMTGIASAATSVVI CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCHHHHHHHHHHHH GYVAGGTKRIRVGSGGVMLPNHAPLIIAEQFGTLETLYPGRIDLGLGRAPGTDMLTARAL HEECCCCEEEEECCCCEECCCCCCEEEECCCCCHHHCCCCCEEECCCCCCCHHHHHHHHH RRDLAASADTFPQDVVELKSYFEPTEPGQLIQAVPGAGLKVPIWLLGSSLFSAQLAAMLG HHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHC MPFAFASHFAPDALLQALDIYRERFKPSESLERPYAMACVNVFAADTDAEAQRLFTSVQQ CHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH QFIRLRRGTPGQLPPPVDDIDSVASPLDRASADHALKYSIIGAPDTVQQGLAAFIRLTGV HHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCH DELMVTGMVYDHAARLRSFELTAQAHQRLAEAEAAQPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]