| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759387
Identifier: 108759387
GI number: 108759387
Start: 1309123
End: 1310196
Strand: Direct
Name: 108759387
Synonym: MXAN_1125
Alternate gene names: NA
Gene position: 1309123-1310196 (Clockwise)
Preceding gene: 108764013
Following gene: 108759773
Centisome position: 14.32
GC content: 66.95
Gene sequence:
>1074_bases ATGCATGCTCAGAAATCCCGGTGCTTTGTCACGCCGGGAGGCCCGTCCGAAGGACCCACGCATCCGGGGGGATGCCACAT GCCCAATCTGCTCGACATGCCTCGCCAGGCATTGATGGACCTGCGTTCACGGCTCAGCCATTCGACGCTCGTGTCCCAGC TACCGCGCAACGTCGTGCCGGACAGTCTGTCCCTGTCCAGTCCGGCGCCTCAGGATTTCGCGCTCGCGGACCCGGAGCGG GTGGAGGGATGGCGGAGAGCCTGCGAACGGTATGTGCGGCCCGGGCAGGTCGTCATGGATGCATGCACCGGAACGGGCCT GCGGACCTTCCTGGCGGCCAGCCGTCAGCCGAAGAAGCTGTACGCGGTGGATGGCTCGCGGCTGCTGGACACGGCGCAGT GGGTGGCGCGTCGCAACGGGCTGGAGAACATCGACTTCGTGCGCGCGCAGCCCTGGCAGTACCAGATGCCGGAGAAGGTG GACGTCCTGCTGCATGAGTTGCTGGGCGACGCCCTCTTCGACGCGGGGCTGGTCCCTCGCATCCTGGACCTGCGCAACCG GGTCCTGAAGCCCGGGGGCCGCATCCTGCCCAACCGCTTCGAGGTCTTCGTGGAGCCGGTGCAACTGCGGGACGAGGCGT GCATCCCCTTCATCTGGAGCCAGCGCTTCCCCAGCGTGGACTACAGTTGCCTCCAGACGCTGCGCGAGGCGATGAACCCG TCCTACTTCACGCGCGTCATCCGCTCCTACGAGGTGGACCACCTGTTGTGCGACCCGGAGCCCGCCTTCGCCTTCGACCT GGAGACGATGGTGGCCGACGGCCTGCCGCACCGCGTGCGCTTCTCCCGGCCAGTGGTGGACGAGGGGCGCGTGGACGGTT TCTGCCTCTTCTACAAGGTGGCCTTCGACGCGGAGCTGTCCTTCAACGTGTCGCCGCTGCGAGGGCAGAACTACGCGGGG ATGATGCTCTTGCGCGTGGACTCGCGGGAGTTCGAGCGCTTCGACACGCTGTCCTTCGAGCTGGACATGGTGGAGCACGC CGACGTGCGCACCTGGCGCTGGCAGTTCACCTGA
Upstream 100 bases:
>100_bases GCTTCCGGGCACACGTCACCGCCGCTGCATTGAGCGCGAGGCTGTTCACCGGGGGACACTCATCCCGTCCCATCGCTGGA TGGCTCTGAACCAGTAAGTC
Downstream 100 bases:
>100_bases GAGCAGAGTCCCCACCCGCAGTGCTGGCGGGTGGACAGCTCCCGCGGTGGGGAGGGTCCGCGCGAGCAGAGGGCGTGGCT AGCTTGCATCGAGGCATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MHAQKSRCFVTPGGPSEGPTHPGGCHMPNLLDMPRQALMDLRSRLSHSTLVSQLPRNVVPDSLSLSSPAPQDFALADPER VEGWRRACERYVRPGQVVMDACTGTGLRTFLAASRQPKKLYAVDGSRLLDTAQWVARRNGLENIDFVRAQPWQYQMPEKV DVLLHELLGDALFDAGLVPRILDLRNRVLKPGGRILPNRFEVFVEPVQLRDEACIPFIWSQRFPSVDYSCLQTLREAMNP SYFTRVIRSYEVDHLLCDPEPAFAFDLETMVADGLPHRVRFSRPVVDEGRVDGFCLFYKVAFDAELSFNVSPLRGQNYAG MMLLRVDSREFERFDTLSFELDMVEHADVRTWRWQFT
Sequences:
>Translated_357_residues MHAQKSRCFVTPGGPSEGPTHPGGCHMPNLLDMPRQALMDLRSRLSHSTLVSQLPRNVVPDSLSLSSPAPQDFALADPER VEGWRRACERYVRPGQVVMDACTGTGLRTFLAASRQPKKLYAVDGSRLLDTAQWVARRNGLENIDFVRAQPWQYQMPEKV DVLLHELLGDALFDAGLVPRILDLRNRVLKPGGRILPNRFEVFVEPVQLRDEACIPFIWSQRFPSVDYSCLQTLREAMNP SYFTRVIRSYEVDHLLCDPEPAFAFDLETMVADGLPHRVRFSRPVVDEGRVDGFCLFYKVAFDAELSFNVSPLRGQNYAG MMLLRVDSREFERFDTLSFELDMVEHADVRTWRWQFT >Mature_357_residues MHAQKSRCFVTPGGPSEGPTHPGGCHMPNLLDMPRQALMDLRSRLSHSTLVSQLPRNVVPDSLSLSSPAPQDFALADPER VEGWRRACERYVRPGQVVMDACTGTGLRTFLAASRQPKKLYAVDGSRLLDTAQWVARRNGLENIDFVRAQPWQYQMPEKV DVLLHELLGDALFDAGLVPRILDLRNRVLKPGGRILPNRFEVFVEPVQLRDEACIPFIWSQRFPSVDYSCLQTLREAMNP SYFTRVIRSYEVDHLLCDPEPAFAFDLETMVADGLPHRVRFSRPVVDEGRVDGFCLFYKVAFDAELSFNVSPLRGQNYAG MMLLRVDSREFERFDTLSFELDMVEHADVRTWRWQFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI227908867, Length=246, Percent_Identity=26.0162601626016, Blast_Score=83, Evalue=5e-16, Organism=Homo sapiens, GI74099699, Length=162, Percent_Identity=26.5432098765432, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI151301219, Length=162, Percent_Identity=25.9259259259259, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI154759421, Length=162, Percent_Identity=25.9259259259259, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI40288288, Length=220, Percent_Identity=26.8181818181818, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI21357573, Length=250, Percent_Identity=26, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24647025, Length=250, Percent_Identity=26, Blast_Score=77, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40790; Mature: 40790
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAQKSRCFVTPGGPSEGPTHPGGCHMPNLLDMPRQALMDLRSRLSHSTLVSQLPRNVVP CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC DSLSLSSPAPQDFALADPERVEGWRRACERYVRPGQVVMDACTGTGLRTFLAASRQPKKL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCEE YAVDGSRLLDTAQWVARRNGLENIDFVRAQPWQYQMPEKVDVLLHELLGDALFDAGLVPR EEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH ILDLRNRVLKPGGRILPNRFEVFVEPVQLRDEACIPFIWSQRFPSVDYSCLQTLREAMNP HHHHHHHHCCCCCCCCCCHHHHEECHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCH SYFTRVIRSYEVDHLLCDPEPAFAFDLETMVADGLPHRVRFSRPVVDEGRVDGFCLFYKV HHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEEE AFDAELSFNVSPLRGQNYAGMMLLRVDSREFERFDTLSFELDMVEHADVRTWRWQFT EECCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCEEEEEHHHCCCCEEEEEECC >Mature Secondary Structure MHAQKSRCFVTPGGPSEGPTHPGGCHMPNLLDMPRQALMDLRSRLSHSTLVSQLPRNVVP CCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCC DSLSLSSPAPQDFALADPERVEGWRRACERYVRPGQVVMDACTGTGLRTFLAASRQPKKL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCEE YAVDGSRLLDTAQWVARRNGLENIDFVRAQPWQYQMPEKVDVLLHELLGDALFDAGLVPR EEECCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH ILDLRNRVLKPGGRILPNRFEVFVEPVQLRDEACIPFIWSQRFPSVDYSCLQTLREAMNP HHHHHHHHCCCCCCCCCCHHHHEECHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHCCH SYFTRVIRSYEVDHLLCDPEPAFAFDLETMVADGLPHRVRFSRPVVDEGRVDGFCLFYKV HHHHHHHHHHCCCEEEECCCCCCEEHHHHHHHCCCCCCEECCCCCCCCCCCCCEEEEEEE AFDAELSFNVSPLRGQNYAGMMLLRVDSREFERFDTLSFELDMVEHADVRTWRWQFT EECCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHCCEEEEEHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA