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The map label for this gene is yqfA [C]

Identifier: 108759382

GI number: 108759382

Start: 3696787

End: 3697557

Strand: Reverse

Name: yqfA [C]

Synonym: MXAN_3156

Alternate gene names: 108759382

Gene position: 3697557-3696787 (Counterclockwise)

Preceding gene: 108758585

Following gene: 108762129

Centisome position: 40.46

GC content: 69.0

Gene sequence:

>771_bases
ATGCCGCTGGACGCTCGGGCACCCCGGGCGTCAGAAGCTGGACGGGATGTCCCGCGCGCTGACGCGAGGGTGACCTGCGA
TGATTACGAGCAGCTCATGGCGTCCCCAGATGGCACCGACACCCTGCTCCTCATCGAGAGCGTCAAGCCCCGGCTCCGAG
GTGTCTCCCACGCCGTGGCCTTCGTGGCGGCGCTGCTCGGGTGCATCCAACTGGCGCTGATGCCAGTGCGCGGCCCCCAG
TACCTGGCCGACCTCGTGTTCGGTGGCAGCATGGTGCTGATGTTCGGCGTGAGCGCCACCTACCACCGCTTCACCTGGGG
CATGGACGCGTACCGGCGCATCCAGCGCTTCGACCACGCGGCCATCTACATCCTCATCGCGGGCTCATTCACGCCCATGG
CCACGCTGGACACCACGGGTGACACCAGCCTGTACCTACTCTGGTTGATGTGGATCGCCGCGCTGACGGGCGCGGGCCTC
ACGCTCCTGGGCGTGCACACCTCGCGAGGGCTGCGCTCCGCCCTCTACGTCGCGCTGGGCGCCGTGGCCACGCCGGTGAT
GCTGCGGCTACCCGAGGTGATTGGCTCCGGGCGCGTCGCGTGGCTCGTGCTGGGCGGAGTGCTCTACGCCGTGGGCGCGG
TCATCTATGCGCGCCGCTGGCCCGACCCGATTCCCACCGTCTTCGGCTACCACGAAATCTTCCACCTGCTCGTCGTGGCC
GCGGCGGGCGTGCATTACGCCGTCATCCTGGACATCGTGGGCGGCGCCTGA

Upstream 100 bases:

>100_bases
GCTCGGCGGAGTCCGTGGTGATGAAACCAACGTTCTGACGCGGAGCGTCTGCCTGGCCGCGAACCAGCAGCGGTGTCTTC
CGGTTCGCACCCGCGGCCGT

Downstream 100 bases:

>100_bases
CGCCGGTGTGACAGCGCTATCGCCGGTGGCAACTGTCGTAGGGCCATTCCCGCTCGCGCTCGCAGCGGACGAAACAGGCG
TAGCAGTCTCCCACCCAACG

Product: hemolysin III family channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPLDARAPRASEAGRDVPRADARVTCDDYEQLMASPDGTDTLLLIESVKPRLRGVSHAVAFVAALLGCIQLALMPVRGPQ
YLADLVFGGSMVLMFGVSATYHRFTWGMDAYRRIQRFDHAAIYILIAGSFTPMATLDTTGDTSLYLLWLMWIAALTGAGL
TLLGVHTSRGLRSALYVALGAVATPVMLRLPEVIGSGRVAWLVLGGVLYAVGAVIYARRWPDPIPTVFGYHEIFHLLVVA
AAGVHYAVILDIVGGA

Sequences:

>Translated_256_residues
MPLDARAPRASEAGRDVPRADARVTCDDYEQLMASPDGTDTLLLIESVKPRLRGVSHAVAFVAALLGCIQLALMPVRGPQ
YLADLVFGGSMVLMFGVSATYHRFTWGMDAYRRIQRFDHAAIYILIAGSFTPMATLDTTGDTSLYLLWLMWIAALTGAGL
TLLGVHTSRGLRSALYVALGAVATPVMLRLPEVIGSGRVAWLVLGGVLYAVGAVIYARRWPDPIPTVFGYHEIFHLLVVA
AAGVHYAVILDIVGGA
>Mature_255_residues
PLDARAPRASEAGRDVPRADARVTCDDYEQLMASPDGTDTLLLIESVKPRLRGVSHAVAFVAALLGCIQLALMPVRGPQY
LADLVFGGSMVLMFGVSATYHRFTWGMDAYRRIQRFDHAAIYILIAGSFTPMATLDTTGDTSLYLLWLMWIAALTGAGLT
LLGVHTSRGLRSALYVALGAVATPVMLRLPEVIGSGRVAWLVLGGVLYAVGAVIYARRWPDPIPTVFGYHEIFHLLVVAA
AGVHYAVILDIVGGA

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=198, Percent_Identity=27.2727272727273, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI154759277, Length=223, Percent_Identity=26.0089686098655, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1789266, Length=209, Percent_Identity=28.7081339712919, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71996356, Length=188, Percent_Identity=28.1914893617021, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24640324, Length=222, Percent_Identity=26.5765765765766, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 27525; Mature: 27393

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLDARAPRASEAGRDVPRADARVTCDDYEQLMASPDGTDTLLLIESVKPRLRGVSHAVA
CCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCEEEEEHHHCHHHHHHHHHHH
FVAALLGCIQLALMPVRGPQYLADLVFGGSMVLMFGVSATYHRFTWGMDAYRRIQRFDHA
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCE
AIYILIAGSFTPMATLDTTGDTSLYLLWLMWIAALTGAGLTLLGVHTSRGLRSALYVALG
EEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH
AVATPVMLRLPEVIGSGRVAWLVLGGVLYAVGAVIYARRWPDPIPTVFGYHEIFHLLVVA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AAGVHYAVILDIVGGA
HCCHHHHHHHHHHCCC
>Mature Secondary Structure 
PLDARAPRASEAGRDVPRADARVTCDDYEQLMASPDGTDTLLLIESVKPRLRGVSHAVA
CCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCEEEEEHHHCHHHHHHHHHHH
FVAALLGCIQLALMPVRGPQYLADLVFGGSMVLMFGVSATYHRFTWGMDAYRRIQRFDHA
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCE
AIYILIAGSFTPMATLDTTGDTSLYLLWLMWIAALTGAGLTLLGVHTSRGLRSALYVALG
EEEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHH
AVATPVMLRLPEVIGSGRVAWLVLGGVLYAVGAVIYARRWPDPIPTVFGYHEIFHLLVVA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
AAGVHYAVILDIVGGA
HCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]