| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is plsB [H]
Identifier: 108759319
GI number: 108759319
Start: 3840191
End: 3842746
Strand: Reverse
Name: plsB [H]
Synonym: MXAN_3288
Alternate gene names: 108759319
Gene position: 3842746-3840191 (Counterclockwise)
Preceding gene: 108762554
Following gene: 108762197
Centisome position: 42.04
GC content: 68.11
Gene sequence:
>2556_bases TTGGAGACCGCGCTGTCACCGACTGCGAATCAGGGAGCGTCCTCGCTGAAGGACGAATTCGGCCCCATGGGCCGGGCGCT GGGAACGCGCTACCTGGAGAGCGTGCACTTCCCGCCGGAAGCAGAAACAGAGCTCCGGAACCTGCACGCCAAGGGCTTCG TGGTGCACGTCATGCGCACCACCGCCTGGGTGAACTTCCTCTACCTGACGTGGGCCATGGTGCGCCGGGCGCTGCCGCCC GTGCGCGCCGTGGTGAACCTGCGGCCATGGTTCACCCGACCCTGGCGACAGGCGAAACAGAGCGGTGACTTCACGCAGCG CTTCGAGCACGCCCGGCAGACGGGGGGCAGCGGTCTGGTCTTCCTGCGCCGCACCGCCCTGCTCCGTCCGTCTGGGAAAG AGACGCGCGAGGACCCCTTCCCCGCCCTGGTGGCCATGGCCCGCCAGTCCGACAAGCCCGTGTACCTGGTGCCGGAGTTG TTCGTCTGGGAGAAGCGCCCCGCGCGCCTGAAGCCCAACTGGGTGGACGTGGTGTTCGGCAGCCCCGAGGCACCGGGATT CCTGCACTCGATGCTGGCCTTCTTCCGCAACTACAAGCGCGCGCAGTTCCGCGTGGGCGAGCCCATCGACCTGCAGCGCT TCGTCGCGGAGAACCCTCGCGACTCGGACGAACTGCTCGCTCGCAAGGCGCGTAGCAGTCTCCACGTCCACCTCGCGCGC GAAACGCGGGCCGTGTTCGGTCCGCCGGTGAAGCCCGCCTCGCGCGTCATCGAGGAGACGCTGCGCGACAGGTCCCTGCG CAAGGTGGTGGAGGAGTGCGCGGCGGAATCCGGGCGCAAGCCGGAGAGCGTCCTGCGCGAGGCTCGCCGCAACCTGGAGG CCATTGCCGCCAAACCCAGCCCCACCGCGCTGGCGTTCACCTCCCCCGTGCTGGAGTGGGTGTTCAACCGCATCTACGAC GGCATGCACGTGGACGAGGCCGGCCTCCACCGCGCGCTCAAGGCCGCGAGCCACGCGCCCATCGTCCTGTGCCCCAGCCA CAAGAGCCACGTCGACTACCTGGTAATGAGCTGGGTGCTATGGAACCGGGGCTACGCGGTGCCCCTGGTGGCCGCGGGCG CCAACCTCTCCTTCTGGCCCCTGGGCACGTTCTTCCGCCGCTGTGGCGCGTTCTTCCTCCGGCGCTCCTTCAAGGGCGAC AAGGTCTACGCCGCGTCCTTCAAGGCCTACGTGCGCAAGCTGGTGCACGACGGCATCCACCAGGAGTTCTTCCCGGAAGG CGGCCGTTCGCGCACGGGCAAGCTGTTGTTGCCCAAGCTGGGCATGTTCACCTGGCAGGTGGAGTCCGTGCTGGAGGGCG CGCGCGATGACCTCATCTTCGTGCCGGTGGCCATCGACTACGAGAAGGTCGTCGAGTCCAGCAGCTACTCGAAGGAGCTG GCTGGCGGAGAGAAGAAGCCCGAGGACCTCAAGGCGCTCTTGAGCACGCCCAAGGTGCTGGCGGCGCGGTACGGCCGCAT CCACCTGGGCTTCGATGAGCCCATCTCCCTGCGCGCGTTCATGCAGGCACGTGGCATCAACCCGGACGAACCGGTGTCGG ACGAACAGAAGAAGGGGCTCGTCCGCGCGCTGGGCAACCGGGTGATGTACGGCATCAGCAAGGTGTCCACGGTGACGCCG CACGCGCTGGTCAGCACCGCCCTGCTCTCGCACCGGCGCCGCGGCTTGACGCAGCGGGAGATGGCAGACCGCATCAACAT CCTGCGCCGCATCGCCGTGGAGGAGGGCTCGCCTCAGTCGGTGGAGATGCGCAACGCCCCCAGCAACCCGGAGACGATGG GCCCCATCCAGGACGCCATGCGCACGTTCATCTCCGACGAGATGGTGCGCACCCAGGAAGCGCGTGGCGAGGTCATCTAC CAGGTCGAGGAGGCACGCCGCCCGGAGCTGTCCTTCTACAAGAACACGCTGATGAACCTGGTGGCCTCCCGGAGCCTCGT GGCCAACGCCATGCTTGCCAGCGGCAGCCCGGCGCCCTACGACACCGTGAAGGAGCGCGCGCTGTTCCTGTCCCGCCTCT TCAAGGTGGAATTCATCTACCGGGTGGGCACCACGTTCGACTCTATCTTCGCGGAGACGGTGGAGCGGCTGGAGCGCATG GGCCTGGTGCTTGAGGAGAACGAGACGCTCCGCGTGGCCCCCGAGGCCCACGCGCGTCCGGACCTGGAGTTCCTGGCCGA CATGCTGCGCGACTACCTGGAGGCCTACCTGCTGGCGGCCCTGACGCTCCAGGATGTGGCCACCGGCGCCGCGGAGGACC GGAAGTCCTTCGTGAAGATGGCCCTGGAAACGGGCCGCGCGGAGTACCACGCCGGCCGCATCACCGCCTCCGAGTCCCTG GCCAAGGTGACGCTGGAGAACGCGGTGGCGTTCCTCCTGGACCAGAAGCTGCTCATCGAGGCCGACAAGAAGCTGACGCT GGGCCCCGCCGCCACCGAGCAGCAGGCCCGCACACAGCTCGTGGACGACATCCGTGGGTACCTGAAGCGCGGCTGA
Upstream 100 bases:
>100_bases CGCGCGACTCGCCCTCATCGACGCCGCCCGGGTTACTCTGGCCGCGGGACTGACGCTGCTGGGCATTCCCACGCCCGACA ACATGTAGCCGGGAGCATTC
Downstream 100 bases:
>100_bases GCAGCCCTCCCTGGCCCCGTCCGCGCCCGCCACCGCGCTGTTCGAGCCAGGATGAAGGGCGTCAAGGTTCGAGCACGAGA GGAATAGGAGAAAGCCCGTT
Product: acyltransferase
Products: NA
Alternate protein names: GPAT [H]
Number of amino acids: Translated: 851; Mature: 851
Protein sequence:
>851_residues METALSPTANQGASSLKDEFGPMGRALGTRYLESVHFPPEAETELRNLHAKGFVVHVMRTTAWVNFLYLTWAMVRRALPP VRAVVNLRPWFTRPWRQAKQSGDFTQRFEHARQTGGSGLVFLRRTALLRPSGKETREDPFPALVAMARQSDKPVYLVPEL FVWEKRPARLKPNWVDVVFGSPEAPGFLHSMLAFFRNYKRAQFRVGEPIDLQRFVAENPRDSDELLARKARSSLHVHLAR ETRAVFGPPVKPASRVIEETLRDRSLRKVVEECAAESGRKPESVLREARRNLEAIAAKPSPTALAFTSPVLEWVFNRIYD GMHVDEAGLHRALKAASHAPIVLCPSHKSHVDYLVMSWVLWNRGYAVPLVAAGANLSFWPLGTFFRRCGAFFLRRSFKGD KVYAASFKAYVRKLVHDGIHQEFFPEGGRSRTGKLLLPKLGMFTWQVESVLEGARDDLIFVPVAIDYEKVVESSSYSKEL AGGEKKPEDLKALLSTPKVLAARYGRIHLGFDEPISLRAFMQARGINPDEPVSDEQKKGLVRALGNRVMYGISKVSTVTP HALVSTALLSHRRRGLTQREMADRINILRRIAVEEGSPQSVEMRNAPSNPETMGPIQDAMRTFISDEMVRTQEARGEVIY QVEEARRPELSFYKNTLMNLVASRSLVANAMLASGSPAPYDTVKERALFLSRLFKVEFIYRVGTTFDSIFAETVERLERM GLVLEENETLRVAPEAHARPDLEFLADMLRDYLEAYLLAALTLQDVATGAAEDRKSFVKMALETGRAEYHAGRITASESL AKVTLENAVAFLLDQKLLIEADKKLTLGPAATEQQARTQLVDDIRGYLKRG
Sequences:
>Translated_851_residues METALSPTANQGASSLKDEFGPMGRALGTRYLESVHFPPEAETELRNLHAKGFVVHVMRTTAWVNFLYLTWAMVRRALPP VRAVVNLRPWFTRPWRQAKQSGDFTQRFEHARQTGGSGLVFLRRTALLRPSGKETREDPFPALVAMARQSDKPVYLVPEL FVWEKRPARLKPNWVDVVFGSPEAPGFLHSMLAFFRNYKRAQFRVGEPIDLQRFVAENPRDSDELLARKARSSLHVHLAR ETRAVFGPPVKPASRVIEETLRDRSLRKVVEECAAESGRKPESVLREARRNLEAIAAKPSPTALAFTSPVLEWVFNRIYD GMHVDEAGLHRALKAASHAPIVLCPSHKSHVDYLVMSWVLWNRGYAVPLVAAGANLSFWPLGTFFRRCGAFFLRRSFKGD KVYAASFKAYVRKLVHDGIHQEFFPEGGRSRTGKLLLPKLGMFTWQVESVLEGARDDLIFVPVAIDYEKVVESSSYSKEL AGGEKKPEDLKALLSTPKVLAARYGRIHLGFDEPISLRAFMQARGINPDEPVSDEQKKGLVRALGNRVMYGISKVSTVTP HALVSTALLSHRRRGLTQREMADRINILRRIAVEEGSPQSVEMRNAPSNPETMGPIQDAMRTFISDEMVRTQEARGEVIY QVEEARRPELSFYKNTLMNLVASRSLVANAMLASGSPAPYDTVKERALFLSRLFKVEFIYRVGTTFDSIFAETVERLERM GLVLEENETLRVAPEAHARPDLEFLADMLRDYLEAYLLAALTLQDVATGAAEDRKSFVKMALETGRAEYHAGRITASESL AKVTLENAVAFLLDQKLLIEADKKLTLGPAATEQQARTQLVDDIRGYLKRG >Mature_851_residues METALSPTANQGASSLKDEFGPMGRALGTRYLESVHFPPEAETELRNLHAKGFVVHVMRTTAWVNFLYLTWAMVRRALPP VRAVVNLRPWFTRPWRQAKQSGDFTQRFEHARQTGGSGLVFLRRTALLRPSGKETREDPFPALVAMARQSDKPVYLVPEL FVWEKRPARLKPNWVDVVFGSPEAPGFLHSMLAFFRNYKRAQFRVGEPIDLQRFVAENPRDSDELLARKARSSLHVHLAR ETRAVFGPPVKPASRVIEETLRDRSLRKVVEECAAESGRKPESVLREARRNLEAIAAKPSPTALAFTSPVLEWVFNRIYD GMHVDEAGLHRALKAASHAPIVLCPSHKSHVDYLVMSWVLWNRGYAVPLVAAGANLSFWPLGTFFRRCGAFFLRRSFKGD KVYAASFKAYVRKLVHDGIHQEFFPEGGRSRTGKLLLPKLGMFTWQVESVLEGARDDLIFVPVAIDYEKVVESSSYSKEL AGGEKKPEDLKALLSTPKVLAARYGRIHLGFDEPISLRAFMQARGINPDEPVSDEQKKGLVRALGNRVMYGISKVSTVTP HALVSTALLSHRRRGLTQREMADRINILRRIAVEEGSPQSVEMRNAPSNPETMGPIQDAMRTFISDEMVRTQEARGEVIY QVEEARRPELSFYKNTLMNLVASRSLVANAMLASGSPAPYDTVKERALFLSRLFKVEFIYRVGTTFDSIFAETVERLERM GLVLEENETLRVAPEAHARPDLEFLADMLRDYLEAYLLAALTLQDVATGAAEDRKSFVKMALETGRAEYHAGRITASESL AKVTLENAVAFLLDQKLLIEADKKLTLGPAATEQQARTQLVDDIRGYLKRG
Specific function: De novo phospholipid biosynthesis; first step. [C]
COG id: COG2937
COG function: function code I; Glycerol-3-phosphate O-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPAT/DAPAT family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=563, Percent_Identity=27.708703374778, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI190358539, Length=557, Percent_Identity=22.0825852782765, Blast_Score=131, Evalue=3e-30, Organism=Escherichia coli, GI87082362, Length=622, Percent_Identity=28.6173633440514, Blast_Score=244, Evalue=2e-65, Organism=Caenorhabditis elegans, GI25147672, Length=332, Percent_Identity=29.2168674698795, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71988723, Length=592, Percent_Identity=25, Blast_Score=144, Evalue=2e-34, Organism=Caenorhabditis elegans, GI71988728, Length=545, Percent_Identity=24.7706422018349, Blast_Score=133, Evalue=4e-31, Organism=Drosophila melanogaster, GI17864692, Length=396, Percent_Identity=29.5454545454545, Blast_Score=184, Evalue=3e-46, Organism=Drosophila melanogaster, GI21357731, Length=324, Percent_Identity=28.7037037037037, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI24650752, Length=324, Percent_Identity=28.7037037037037, Blast_Score=145, Evalue=2e-34, Organism=Drosophila melanogaster, GI24650754, Length=324, Percent_Identity=28.7037037037037, Blast_Score=145, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR022284 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.15 [H]
Molecular weight: Translated: 95725; Mature: 95725
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METALSPTANQGASSLKDEFGPMGRALGTRYLESVHFPPEAETELRNLHAKGFVVHVMRT CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHH TAWVNFLYLTWAMVRRALPPVRAVVNLRPWFTRPWRQAKQSGDFTQRFEHARQTGGSGLV HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEE FLRRTALLRPSGKETREDPFPALVAMARQSDKPVYLVPELFVWEKRPARLKPNWVDVVFG HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCEEEEEEC SPEAPGFLHSMLAFFRNYKRAQFRVGEPIDLQRFVAENPRDSDELLARKARSSLHVHLAR CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHEEEEHH ETRAVFGPPVKPASRVIEETLRDRSLRKVVEECAAESGRKPESVLREARRNLEAIAAKPS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHEECCCC PTALAFTSPVLEWVFNRIYDGMHVDEAGLHRALKAASHAPIVLCPSHKSHVDYLVMSWVL CCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH WNRGYAVPLVAAGANLSFWPLGTFFRRCGAFFLRRSFKGDKVYAASFKAYVRKLVHDGIH HCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH QEFFPEGGRSRTGKLLLPKLGMFTWQVESVLEGARDDLIFVPVAIDYEKVVESSSYSKEL HHHCCCCCCCCCCCEECCHHCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCHHHHH AGGEKKPEDLKALLSTPKVLAARYGRIHLGFDEPISLRAFMQARGINPDEPVSDEQKKGL CCCCCCHHHHHHHHHCHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH VRALGNRVMYGISKVSTVTPHALVSTALLSHRRRGLTQREMADRINILRRIAVEEGSPQS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC VEMRNAPSNPETMGPIQDAMRTFISDEMVRTQEARGEVIYQVEEARRPELSFYKNTLMNL EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCHHHHHHHHHHHH VASRSLVANAMLASGSPAPYDTVKERALFLSRLFKVEFIYRVGTTFDSIFAETVERLERM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC GLVLEENETLRVAPEAHARPDLEFLADMLRDYLEAYLLAALTLQDVATGAAEDRKSFVKM CCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALETGRAEYHAGRITASESLAKVTLENAVAFLLDQKLLIEADKKLTLGPAATEQQARTQL HHHHCCHHHHCCCEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCHHHHHHHH VDDIRGYLKRG HHHHHHHHCCC >Mature Secondary Structure METALSPTANQGASSLKDEFGPMGRALGTRYLESVHFPPEAETELRNLHAKGFVVHVMRT CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHH TAWVNFLYLTWAMVRRALPPVRAVVNLRPWFTRPWRQAKQSGDFTQRFEHARQTGGSGLV HHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCEE FLRRTALLRPSGKETREDPFPALVAMARQSDKPVYLVPELFVWEKRPARLKPNWVDVVFG HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCEEECCHHHHCCCCCCCCCCCEEEEEEC SPEAPGFLHSMLAFFRNYKRAQFRVGEPIDLQRFVAENPRDSDELLARKARSSLHVHLAR CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHEEEEHH ETRAVFGPPVKPASRVIEETLRDRSLRKVVEECAAESGRKPESVLREARRNLEAIAAKPS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHEECCCC PTALAFTSPVLEWVFNRIYDGMHVDEAGLHRALKAASHAPIVLCPSHKSHVDYLVMSWVL CCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH WNRGYAVPLVAAGANLSFWPLGTFFRRCGAFFLRRSFKGDKVYAASFKAYVRKLVHDGIH HCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHH QEFFPEGGRSRTGKLLLPKLGMFTWQVESVLEGARDDLIFVPVAIDYEKVVESSSYSKEL HHHCCCCCCCCCCCEECCHHCHHHHHHHHHHCCCCCCEEEEEEECCHHHHHCCCCHHHHH AGGEKKPEDLKALLSTPKVLAARYGRIHLGFDEPISLRAFMQARGINPDEPVSDEQKKGL CCCCCCHHHHHHHHHCHHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHH VRALGNRVMYGISKVSTVTPHALVSTALLSHRRRGLTQREMADRINILRRIAVEEGSPQS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC VEMRNAPSNPETMGPIQDAMRTFISDEMVRTQEARGEVIYQVEEARRPELSFYKNTLMNL EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHCCCCHHHHHHHHHHHH VASRSLVANAMLASGSPAPYDTVKERALFLSRLFKVEFIYRVGTTFDSIFAETVERLERM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHC GLVLEENETLRVAPEAHARPDLEFLADMLRDYLEAYLLAALTLQDVATGAAEDRKSFVKM CCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ALETGRAEYHAGRITASESLAKVTLENAVAFLLDQKLLIEADKKLTLGPAATEQQARTQL HHHHCCHHHHCCCEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEECCCCCCHHHHHHHH VDDIRGYLKRG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA