| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759273
Identifier: 108759273
GI number: 108759273
Start: 2199092
End: 2200267
Strand: Reverse
Name: 108759273
Synonym: MXAN_1877
Alternate gene names: NA
Gene position: 2200267-2199092 (Counterclockwise)
Preceding gene: 108758548
Following gene: 108760097
Centisome position: 24.07
GC content: 68.45
Gene sequence:
>1176_bases ATGAGCGCCCTGCGAAACCAGCATTTGTCATACAGCCGGCTGAGCCGCTTCGAGGCCTGCCCGCTGTCGTACCAGCTCCA CTACCTCGACAAGCGCACTGCCGAGCCCGGCGTCCCCCTGAGCTTCGGCAAAGCGCTGCACGCCGTCCTCGAGCGGCTCC TCCAGGAAGTCATCGACACCGAGTACGTGGGCCGCCTCTCCGAGGAGCGCGCCCTCCAGCTCTACCGTGAAGAGTGGGCC GCCTCGGGCCTCTCCGGTTTGGACGTCTTTCAGCAGGGCCTCCGCATCCTCCAGGACTTCGTCCGCCAGCAGGGCCGCGT GGACTGCCGCGACATCCTTGCCGTCGAGAAGGAGTTCCGCTTGCCGGTGGGCCCCTTCACCGTCCTGGGCTTCATCGACC GCGTCGACTGGGTGGACGACGAGACAGTCCACGTCATGGACTATAAATCCAACCACCAGCTCTTCACCCGCGAGGAGCTG GACTCCAGCCTCCAGCTCAGCCTCTACGCCCTCGCAGCGCGCCGCATGTGGCCCTGGGCGAAGAAGGTGCGCCTCTCCAT GTGGATGCTGCGCCACGGCGTGCTGCAGGAGACGACGCGCACCGAGGAGCAGTTGGAAGCCGCCCTCGCCTACGTCGAGA CGCTGGGCCAGCAGATGGAGACGGCGGAGTCCTTCCCCGCCCGCCTCAACCCCAACTGCGTGTACTGCGACCACCGGCGC GACTGCCCCGCCTACGCCCAGGCGCTGGAGGGCCGGCGTGGCGTCGTCTGCGAGGACACGTCTGACTTGGAGTCCGTCGC CCGGGAGCGCCAGGAAGTCGCCCACCTCGCGAAGATTCTCGGCGCGCGCAAGGCGGAGCTGGAGGGCGTCCTCCGCGCCC ACCTTGCCGAGCAGGACGAACTCGTCCTCGCCGGCACGCGCTACCGCATGTTCAACACCACCAGCCTCGACTACCCGCTG GAGCCCACCGTCGCGGTGCTGGCCCCCGCCACCGGCCTCCCCCGTGAGGATTTGGTGCAGCGCCTCGCCAGCGTCGAGAA GAAGGCCCTCGACGCGCTCCTGAAGGACGCGGGCAAGCGCCTGGGCACCGCGCGCGTCGCGCTGCTGAAGGCCGAGCTGG ACTCCCTCGCCGCCAAACACCACTCGCCCAGGTTCTGGGCCAAAGAGGTTGCATAG
Upstream 100 bases:
>100_bases CGGGCCATGCTGCCTGTCCCCTTCGACTTGATGTGTCTCTCGAAAAGAGCGTGATGACTGACTCGCGACACGCCCGCCGC ACCGGCCCGGAGGCCACGTC
Downstream 100 bases:
>100_bases TGCTGCTCGCTCATCCTGCTTCTGACACCACTCCTGTCTCTGCCCTCCGTCCGCCGCTCTTCCCCGGCATCCCGCCGCAC CTGCGGACGCTCTGCTTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 390
Protein sequence:
>391_residues MSALRNQHLSYSRLSRFEACPLSYQLHYLDKRTAEPGVPLSFGKALHAVLERLLQEVIDTEYVGRLSEERALQLYREEWA ASGLSGLDVFQQGLRILQDFVRQQGRVDCRDILAVEKEFRLPVGPFTVLGFIDRVDWVDDETVHVMDYKSNHQLFTREEL DSSLQLSLYALAARRMWPWAKKVRLSMWMLRHGVLQETTRTEEQLEAALAYVETLGQQMETAESFPARLNPNCVYCDHRR DCPAYAQALEGRRGVVCEDTSDLESVARERQEVAHLAKILGARKAELEGVLRAHLAEQDELVLAGTRYRMFNTTSLDYPL EPTVAVLAPATGLPREDLVQRLASVEKKALDALLKDAGKRLGTARVALLKAELDSLAAKHHSPRFWAKEVA
Sequences:
>Translated_391_residues MSALRNQHLSYSRLSRFEACPLSYQLHYLDKRTAEPGVPLSFGKALHAVLERLLQEVIDTEYVGRLSEERALQLYREEWA ASGLSGLDVFQQGLRILQDFVRQQGRVDCRDILAVEKEFRLPVGPFTVLGFIDRVDWVDDETVHVMDYKSNHQLFTREEL DSSLQLSLYALAARRMWPWAKKVRLSMWMLRHGVLQETTRTEEQLEAALAYVETLGQQMETAESFPARLNPNCVYCDHRR DCPAYAQALEGRRGVVCEDTSDLESVARERQEVAHLAKILGARKAELEGVLRAHLAEQDELVLAGTRYRMFNTTSLDYPL EPTVAVLAPATGLPREDLVQRLASVEKKALDALLKDAGKRLGTARVALLKAELDSLAAKHHSPRFWAKEVA >Mature_390_residues SALRNQHLSYSRLSRFEACPLSYQLHYLDKRTAEPGVPLSFGKALHAVLERLLQEVIDTEYVGRLSEERALQLYREEWAA SGLSGLDVFQQGLRILQDFVRQQGRVDCRDILAVEKEFRLPVGPFTVLGFIDRVDWVDDETVHVMDYKSNHQLFTREELD SSLQLSLYALAARRMWPWAKKVRLSMWMLRHGVLQETTRTEEQLEAALAYVETLGQQMETAESFPARLNPNCVYCDHRRD CPAYAQALEGRRGVVCEDTSDLESVARERQEVAHLAKILGARKAELEGVLRAHLAEQDELVLAGTRYRMFNTTSLDYPLE PTVAVLAPATGLPREDLVQRLASVEKKALDALLKDAGKRLGTARVALLKAELDSLAAKHHSPRFWAKEVA
Specific function: Unknown
COG id: COG2887
COG function: function code L; RecB family exonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44397; Mature: 44266
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALRNQHLSYSRLSRFEACPLSYQLHYLDKRTAEPGVPLSFGKALHAVLERLLQEVIDT CCCHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EYVGRLSEERALQLYREEWAASGLSGLDVFQQGLRILQDFVRQQGRVDCRDILAVEKEFR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC LPVGPFTVLGFIDRVDWVDDETVHVMDYKSNHQLFTREELDSSLQLSLYALAARRMWPWA CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHHHHHHHHHHCHHH KKVRLSMWMLRHGVLQETTRTEEQLEAALAYVETLGQQMETAESFPARLNPNCVYCDHRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC DCPAYAQALEGRRGVVCEDTSDLESVARERQEVAHLAKILGARKAELEGVLRAHLAEQDE CCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC LVLAGTRYRMFNTTSLDYPLEPTVAVLAPATGLPREDLVQRLASVEKKALDALLKDAGKR EEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGTARVALLKAELDSLAAKHHSPRFWAKEVA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC >Mature Secondary Structure SALRNQHLSYSRLSRFEACPLSYQLHYLDKRTAEPGVPLSFGKALHAVLERLLQEVIDT CCHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH EYVGRLSEERALQLYREEWAASGLSGLDVFQQGLRILQDFVRQQGRVDCRDILAVEKEFR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC LPVGPFTVLGFIDRVDWVDDETVHVMDYKSNHQLFTREELDSSLQLSLYALAARRMWPWA CCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEHHHCCCHHHHHHHHHHHHHHCHHH KKVRLSMWMLRHGVLQETTRTEEQLEAALAYVETLGQQMETAESFPARLNPNCVYCDHRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC DCPAYAQALEGRRGVVCEDTSDLESVARERQEVAHLAKILGARKAELEGVLRAHLAEQDE CCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC LVLAGTRYRMFNTTSLDYPLEPTVAVLAPATGLPREDLVQRLASVEKKALDALLKDAGKR EEEECCEEEEEECCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LGTARVALLKAELDSLAAKHHSPRFWAKEVA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA