| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is hisD [H]
Identifier: 108759254
GI number: 108759254
Start: 5187669
End: 5188982
Strand: Reverse
Name: hisD [H]
Synonym: MXAN_4229
Alternate gene names: 108759254
Gene position: 5188982-5187669 (Counterclockwise)
Preceding gene: 108763734
Following gene: 108757852
Centisome position: 56.77
GC content: 72.22
Gene sequence:
>1314_bases ATGACGGCCTTCCTTGCTTCGTCGACCCTGAGGTACCGCGGTCCTCTGTCCGCTCTTGCTCGGGAGGACGTCCGGCGTCT GCTGGACCGCGCGACTGGATCCGATGCCCGCGTCGCGCTGCGCGTGCGGGAGATCATCGCCCGCGTGCGAGCGGAAGGGG ACCAGGCGCTCTTCGAACTCGCGCGGCAGTTCGACCGCGTGGAGCTGACGGCGCTGGAGGTTCCGCGAGAGGTCTGTGCC GCGGCGCTCGCCGGATTGGAGCCATCGGTCAGGGACGCGCTGGCCCGAGCGGCCCGCAACATCGCCCTGGCGCACGCGCC GCAGAAGCCGCAATGGGTGGAGGTCGAAACCGAGCCCGGTGTGCTCGTGGGCCGGCGGCCGGATCCGCTGGGCCGCGTGG GGGTGTATGCACCGGGAGGCCGCGCGGTGTACCCCAGCAGCGTACTGATGGGGGTGGTGCCCGCGAAGGTAGCGGGCGTG GGCGAGGTCATCGTGTGCTCGCCGCCGGGGCCCGATGGATTGCCACACCCCAGCGTGCTGGCGGCGGCATCTCTGGCGGG CGCGGACCGAGTCTTCTCGCTGGGCGGCGCTGGCGCGGTGGCGGCCATGGCCCATGGCACGGAAAGCGTGCCGCGCGTGG ACCGCATCGTGGGGCCGGGCAATGCCTATGTGGCCGAGGCCAAGCTGCAGGTGGTGGGCGCGGTGGCGATTGAAGCACCC GCGGGCCCCAGTGAAATCCTGGTCGTGGCCGACGACACGGCGAACCCTGCCGCGGTGGCGCGGGAGATGCTGGCTCAGGC GGAGCATGACCCAGAGGCGGCTTGTGTCACGCTGGCGCTGGGGGACGCGCTGGCGGACGCCATCGCCGCGGAGGTGGAGC GGCAGGCCGAGCGCGCGAAGCGGTGGGAGATCGTCACGTCGGCCCTGGGCTCTCGCGGCGCGGTGCTGACGGTGGCGTCC CTGGAGGAAGCCTGGCCCTTCGTGGCGGACTTTGCTCCGGAGCATCTGCTCATCGCCACCGCGTCGCCGCGGGAGGACCT GGGGCAGGTGCGCAACGCGGGCACCGTCTTCCTGGGTGAGCGCTCGTCGGTGGCCTACGGCGATTACATGACCGGCTCCA ACCACGTGTTGCCCACGGCGGGGTTGGCGCGGGCGTACTCGGGACTCAACCTGCTCGACTTCTACCGGTGGACCACCTAC CAGCGCGTCGCGCCCACGGCGGCGGCGTCTCTTGCGGAGGACGTGGGGCGGCTGGCCGACAGTGAAGGTCTCTTCGCGCA CGCGGACGCCGCGCGCGCCTGGGGGCGGCCATGA
Upstream 100 bases:
>100_bases ACGCGGTGGTGCCGGCGAAGACCATCTACCGCACCATCAACGCGCTGAAGGCACTGGGCTGCGAGGGCATCCTCGTCACC CGCATTGAAAGGTTGATGGC
Downstream 100 bases:
>100_bases TTCCCAGGCGGGCTTCGTATCGGGACATTCCGCTGTACGCGCCTTCGACGCGGCCGTGCCGGGTGGACCTGAGTGACAAC ACCAACCTCTTTGGCGTTCC
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTAFLASSTLRYRGPLSALAREDVRRLLDRATGSDARVALRVREIIARVRAEGDQALFELARQFDRVELTALEVPREVCA AALAGLEPSVRDALARAARNIALAHAPQKPQWVEVETEPGVLVGRRPDPLGRVGVYAPGGRAVYPSSVLMGVVPAKVAGV GEVIVCSPPGPDGLPHPSVLAAASLAGADRVFSLGGAGAVAAMAHGTESVPRVDRIVGPGNAYVAEAKLQVVGAVAIEAP AGPSEILVVADDTANPAAVAREMLAQAEHDPEAACVTLALGDALADAIAAEVERQAERAKRWEIVTSALGSRGAVLTVAS LEEAWPFVADFAPEHLLIATASPREDLGQVRNAGTVFLGERSSVAYGDYMTGSNHVLPTAGLARAYSGLNLLDFYRWTTY QRVAPTAAASLAEDVGRLADSEGLFAHADAARAWGRP
Sequences:
>Translated_437_residues MTAFLASSTLRYRGPLSALAREDVRRLLDRATGSDARVALRVREIIARVRAEGDQALFELARQFDRVELTALEVPREVCA AALAGLEPSVRDALARAARNIALAHAPQKPQWVEVETEPGVLVGRRPDPLGRVGVYAPGGRAVYPSSVLMGVVPAKVAGV GEVIVCSPPGPDGLPHPSVLAAASLAGADRVFSLGGAGAVAAMAHGTESVPRVDRIVGPGNAYVAEAKLQVVGAVAIEAP AGPSEILVVADDTANPAAVAREMLAQAEHDPEAACVTLALGDALADAIAAEVERQAERAKRWEIVTSALGSRGAVLTVAS LEEAWPFVADFAPEHLLIATASPREDLGQVRNAGTVFLGERSSVAYGDYMTGSNHVLPTAGLARAYSGLNLLDFYRWTTY QRVAPTAAASLAEDVGRLADSEGLFAHADAARAWGRP >Mature_436_residues TAFLASSTLRYRGPLSALAREDVRRLLDRATGSDARVALRVREIIARVRAEGDQALFELARQFDRVELTALEVPREVCAA ALAGLEPSVRDALARAARNIALAHAPQKPQWVEVETEPGVLVGRRPDPLGRVGVYAPGGRAVYPSSVLMGVVPAKVAGVG EVIVCSPPGPDGLPHPSVLAAASLAGADRVFSLGGAGAVAAMAHGTESVPRVDRIVGPGNAYVAEAKLQVVGAVAIEAPA GPSEILVVADDTANPAAVAREMLAQAEHDPEAACVTLALGDALADAIAAEVERQAERAKRWEIVTSALGSRGAVLTVASL EEAWPFVADFAPEHLLIATASPREDLGQVRNAGTVFLGERSSVAYGDYMTGSNHVLPTAGLARAYSGLNLLDFYRWTTYQ RVAPTAAASLAEDVGRLADSEGLFAHADAARAWGRP
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=413, Percent_Identity=42.1307506053269, Blast_Score=287, Evalue=9e-79, Organism=Saccharomyces cerevisiae, GI6319819, Length=417, Percent_Identity=38.6091127098321, Blast_Score=273, Evalue=5e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 45609; Mature: 45478
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAFLASSTLRYRGPLSALAREDVRRLLDRATGSDARVALRVREIIARVRAEGDQALFEL CCCEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH ARQFDRVELTALEVPREVCAAALAGLEPSVRDALARAARNIALAHAPQKPQWVEVETEPG HHHHCCEEEHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCC VLVGRRPDPLGRVGVYAPGGRAVYPSSVLMGVVPAKVAGVGEVIVCSPPGPDGLPHPSVL EEECCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHH AAASLAGADRVFSLGGAGAVAAMAHGTESVPRVDRIVGPGNAYVAEAKLQVVGAVAIEAP HHHHHCCCHHHEECCCCCHHHHHHCCCCCCCHHHHHCCCCCCEEEEHHEEEEEEEEEECC AGPSEILVVADDTANPAAVAREMLAQAEHDPEAACVTLALGDALADAIAAEVERQAERAK CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH RWEIVTSALGSRGAVLTVASLEEAWPFVADFAPEHLLIATASPREDLGQVRNAGTVFLGE HHHHHHHHHCCCCCEEEEECHHHHCCHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEEC RSSVAYGDYMTGSNHVLPTAGLARAYSGLNLLDFYRWTTYQRVAPTAAASLAEDVGRLAD CCCEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEGLFAHADAARAWGRP CCCCEEECHHHHCCCCC >Mature Secondary Structure TAFLASSTLRYRGPLSALAREDVRRLLDRATGSDARVALRVREIIARVRAEGDQALFEL CCEECCCCHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH ARQFDRVELTALEVPREVCAAALAGLEPSVRDALARAARNIALAHAPQKPQWVEVETEPG HHHHCCEEEHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEEECCCCCCEEEEECCCC VLVGRRPDPLGRVGVYAPGGRAVYPSSVLMGVVPAKVAGVGEVIVCSPPGPDGLPHPSVL EEECCCCCCCCCEEEECCCCCEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHH AAASLAGADRVFSLGGAGAVAAMAHGTESVPRVDRIVGPGNAYVAEAKLQVVGAVAIEAP HHHHHCCCHHHEECCCCCHHHHHHCCCCCCCHHHHHCCCCCCEEEEHHEEEEEEEEEECC AGPSEILVVADDTANPAAVAREMLAQAEHDPEAACVTLALGDALADAIAAEVERQAERAK CCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH RWEIVTSALGSRGAVLTVASLEEAWPFVADFAPEHLLIATASPREDLGQVRNAGTVFLGE HHHHHHHHHCCCCCEEEEECHHHHCCHHHHCCCCEEEEEECCCHHHHHHHHCCCEEEEEC RSSVAYGDYMTGSNHVLPTAGLARAYSGLNLLDFYRWTTYQRVAPTAAASLAEDVGRLAD CCCEEECCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SEGLFAHADAARAWGRP CCCCEEECHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA