| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yfiP [C]
Identifier: 108759177
GI number: 108759177
Start: 2358345
End: 2359535
Strand: Direct
Name: yfiP [C]
Synonym: MXAN_2028
Alternate gene names: 108759177
Gene position: 2358345-2359535 (Clockwise)
Preceding gene: 108759860
Following gene: 108759852
Centisome position: 25.8
GC content: 71.45
Gene sequence:
>1191_bases GTGGCCGTGCGTAACCTCTGCCTGCGTTGCCGCCGTCCCGAGAGCGCGTGTTATTGCGCGCAACTGCCGCCCCGGTTGGA GACTCGCACGCGCGTCGTGTTCCTCCAGCACCCGCGCGAGAGCCGCGTGGCCATTGGCACCGCGCGCATGGCCCACCTGT CGCTGAGCAACTCCGAGCTGCATGAGGGCGTGGACTTCTCCGGCCACCGGCGAATCGAGGAGCTGGCCGCGCAGCGGGAC TCCGTCGCGGTGCTCTTCCCGGGCGAGGACGCCATCTCGGTGGAGGAGGCGCGGCTGAATCCTCCCAAGACGCTCATCGT CGTGGACGGCACCTGGCCGCAGGCGAAGAAGGTCGTGTCGCGCAACCCGGTGCTGGCCGGGCTGCCGCGCATCGGCTTCG TGCCGCGCCGGCCCAGCAACTATCGCATCCGCGCGGAGCCCGCGGACCACTGCGTGTCCACCATCGAGGCGGTGGTGGAG ATGCTGGGCATCCTGGAAGGGGACCCCGCGCGCTTCGACACGATGCTGCGGGCCTTCGAGTACATGGTGGATACGCAGTT GGAACGGCAATCGGCGCGCACCTCACCCAATCGGCGCCGCATCTACTTCGGGCCGTGGCGTCCACCGCTGGAGCTGCGCA CGCTGGCGGAGCGCTTCGAGAAGCTCGTCGTCTTCTACGGGGAGGCGAACGCGCACCCCGCGGGCGGCGAGGAGATTCCC ACCGAGCTGGTGCACGCGGTGGCGTGCCGTCCGGCCACGGGCGAGCGCTTCGAGGCCATCATCGCGCCGGAGCAGCCCCT GGCCTACAGCACGCCGCTGCATGTGGAGTTGTCGGAGGACATCCTCCGCGCGGGCGAGCCCCGGGCCGAGGCGATGAAGC GCTTCGAGGCCTTCCTCCGCCCCGATGACGAGCTGGCGGTGTGGACCACGTTCGCGCTGGACCTGCTGTGGGCGGGCGGC ATCACCCGGCGTCCGGCGAGCAGCGTGCGCCTGGCTACCGCGCGCGCGCTGAAGGGCAAGGCGGGCGGCGTGGAGCAGGC GATGACGCTGTTGCAGGGGCCGGAGTTGCCGCAGTGGGCCCCGGGCCGCGCGGGCCGGCGCATTCGTGCGCTGGAGTCCG TGGTGCGCGAGCTGGTGGCTCGCGGCAACGCCACCGAGCCGCCTCAGAAGCTGCCTCGCACGGGTAGCTGA
Upstream 100 bases:
>100_bases CCGGCCGCTGTTGCCCCGGGGAAGCCGGCCCCCGGGCACCCAGCCTGCCCGGCCCTCCCGTGGTGGGACTTGCCCCTGCT CGGAGCGTGCCGTAAAGGCG
Downstream 100 bases:
>100_bases GTCCGAGGCCCGTTACCGTCCGTGCTGTGCGTCGCGGGCGGGCACATGAGGCCGTCATCTCCCGCCCGCCTCAGGGCAGC AGTCCCGTCTTGGCCTCCTT
Product: DTW domain-containing protein
Products: NA
Alternate protein names: DTW Domain Containing Protein; DTW Domain Protein; Dtw Domain Containing Protein; Cytoplasmic Protein; DTW Domain; Dtw Domain Protein; DTW Protein
Number of amino acids: Translated: 396; Mature: 395
Protein sequence:
>396_residues MAVRNLCLRCRRPESACYCAQLPPRLETRTRVVFLQHPRESRVAIGTARMAHLSLSNSELHEGVDFSGHRRIEELAAQRD SVAVLFPGEDAISVEEARLNPPKTLIVVDGTWPQAKKVVSRNPVLAGLPRIGFVPRRPSNYRIRAEPADHCVSTIEAVVE MLGILEGDPARFDTMLRAFEYMVDTQLERQSARTSPNRRRIYFGPWRPPLELRTLAERFEKLVVFYGEANAHPAGGEEIP TELVHAVACRPATGERFEAIIAPEQPLAYSTPLHVELSEDILRAGEPRAEAMKRFEAFLRPDDELAVWTTFALDLLWAGG ITRRPASSVRLATARALKGKAGGVEQAMTLLQGPELPQWAPGRAGRRIRALESVVRELVARGNATEPPQKLPRTGS
Sequences:
>Translated_396_residues MAVRNLCLRCRRPESACYCAQLPPRLETRTRVVFLQHPRESRVAIGTARMAHLSLSNSELHEGVDFSGHRRIEELAAQRD SVAVLFPGEDAISVEEARLNPPKTLIVVDGTWPQAKKVVSRNPVLAGLPRIGFVPRRPSNYRIRAEPADHCVSTIEAVVE MLGILEGDPARFDTMLRAFEYMVDTQLERQSARTSPNRRRIYFGPWRPPLELRTLAERFEKLVVFYGEANAHPAGGEEIP TELVHAVACRPATGERFEAIIAPEQPLAYSTPLHVELSEDILRAGEPRAEAMKRFEAFLRPDDELAVWTTFALDLLWAGG ITRRPASSVRLATARALKGKAGGVEQAMTLLQGPELPQWAPGRAGRRIRALESVVRELVARGNATEPPQKLPRTGS >Mature_395_residues AVRNLCLRCRRPESACYCAQLPPRLETRTRVVFLQHPRESRVAIGTARMAHLSLSNSELHEGVDFSGHRRIEELAAQRDS VAVLFPGEDAISVEEARLNPPKTLIVVDGTWPQAKKVVSRNPVLAGLPRIGFVPRRPSNYRIRAEPADHCVSTIEAVVEM LGILEGDPARFDTMLRAFEYMVDTQLERQSARTSPNRRRIYFGPWRPPLELRTLAERFEKLVVFYGEANAHPAGGEEIPT ELVHAVACRPATGERFEAIIAPEQPLAYSTPLHVELSEDILRAGEPRAEAMKRFEAFLRPDDELAVWTTFALDLLWAGGI TRRPASSVRLATARALKGKAGGVEQAMTLLQGPELPQWAPGRAGRRIRALESVVRELVARGNATEPPQKLPRTGS
Specific function: Unknown
COG id: COG3148
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27734779, Length=189, Percent_Identity=32.2751322751323, Blast_Score=97, Evalue=2e-20, Organism=Escherichia coli, GI87082133, Length=167, Percent_Identity=28.7425149700599, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI21358337, Length=191, Percent_Identity=34.0314136125654, Blast_Score=116, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44070; Mature: 43939
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVRNLCLRCRRPESACYCAQLPPRLETRTRVVFLQHPRESRVAIGTARMAHLSLSNSEL CCHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHHEEEECCCHHH HEGVDFSGHRRIEELAAQRDSVAVLFPGEDAISVEEARLNPPKTLIVVDGTWPQAKKVVS HCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHH RNPVLAGLPRIGFVPRRPSNYRIRAEPADHCVSTIEAVVEMLGILEGDPARFDTMLRAFE CCCCEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YMVDTQLERQSARTSPNRRRIYFGPWRPPLELRTLAERFEKLVVFYGEANAHPAGGEEIP HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCHHH TELVHAVACRPATGERFEAIIAPEQPLAYSTPLHVELSEDILRAGEPRAEAMKRFEAFLR HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHC PDDELAVWTTFALDLLWAGGITRRPASSVRLATARALKGKAGGVEQAMTLLQGPELPQWA CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC PGRAGRRIRALESVVRELVARGNATEPPQKLPRTGS CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC >Mature Secondary Structure AVRNLCLRCRRPESACYCAQLPPRLETRTRVVFLQHPRESRVAIGTARMAHLSLSNSEL CHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHHEEEECCCHHH HEGVDFSGHRRIEELAAQRDSVAVLFPGEDAISVEEARLNPPKTLIVVDGTWPQAKKVVS HCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCEEEEEECCCHHHHHHHH RNPVLAGLPRIGFVPRRPSNYRIRAEPADHCVSTIEAVVEMLGILEGDPARFDTMLRAFE CCCCEECCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YMVDTQLERQSARTSPNRRRIYFGPWRPPLELRTLAERFEKLVVFYGEANAHPAGGEEIP HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCHHH TELVHAVACRPATGERFEAIIAPEQPLAYSTPLHVELSEDILRAGEPRAEAMKRFEAFLR HHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHHCCCCHHHHHHHHHHHHC PDDELAVWTTFALDLLWAGGITRRPASSVRLATARALKGKAGGVEQAMTLLQGPELPQWA CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCC PGRAGRRIRALESVVRELVARGNATEPPQKLPRTGS CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA