| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is thiE
Identifier: 108759139
GI number: 108759139
Start: 6359874
End: 6360530
Strand: Reverse
Name: thiE
Synonym: MXAN_5087
Alternate gene names: 108759139
Gene position: 6360530-6359874 (Counterclockwise)
Preceding gene: 108762358
Following gene: 108762652
Centisome position: 69.59
GC content: 72.15
Gene sequence:
>657_bases ATGAACGCACCGTCCCGCCCGCACCTTCCCCGCGGTCCTTACCTGCTGTGCGACGACTCCGTCCTGCCGGAGATTTCACT GGTGGACAAGGCGGCTCGCCTGGTGGCCGGCGGGGCCCGGCTGGTGCAACTGCGCATGAAGCGCACCCCGATTCGTGAGG CGCTGGCCGCCACGCGGCAGGTGGTGGCGCTGTGCCGCCGGGAAGGCGCGCTGTGCCTGGTGAACGACCGGGTGGACCTG GCGCTGCTGGCGGACGCGGACGGTGTGCACGTGGGTGACGAGGACGTGCCCGCCGAGGATGCGCGCGCGCTGCTGGGGCC TGGCCGTCTGGTGGGCGTCACGGTGCGAGACGTGGTGGGCGCGCGGGCGGCGCAAGCGGCGGGGGCGGACTATGTGGGGC TGGGGCCTGTCTTCCCCACGTCGACGAAACAGGTGCCCGCGCCAGTGCTGGGTCTGGAGGCCTTCGCGTCCGTGGTGCGT GACAGCCCGCTGCCCGTGGTGGGCATTGGTGGGGTGGGGCTGGTGAACATCGCGAGCGTGGCGGCGGCCGGGGCGCACTG TGCGGCGGTGGTGTCCGACGCGCTGCTCGCCGCGGATATCACCGAGCGTGTGAGGCGGTTGGTTGAGGCGTTTGAACAGG GGCGTTTCGGGGCATAG
Upstream 100 bases:
>100_bases TCCGCCATGGTTCAAATCCTCAGAATTGCTTGGAAAACAGCGCGGCACCTTATAGCAGGGTGGCCATCTGTCAACGCCGC CGTCCTGCCTTCCAGAGCCG
Downstream 100 bases:
>100_bases CCTCGAAGCCAGGAGCTTCCATGAACAACCATTCGCGTCACCACGGGCCGGCGCCGCGCCGCCCCAACATCGGCATCACC CCGGACTGGAGTCCGGCCGG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MNAPSRPHLPRGPYLLCDDSVLPEISLVDKAARLVAGGARLVQLRMKRTPIREALAATRQVVALCRREGALCLVNDRVDL ALLADADGVHVGDEDVPAEDARALLGPGRLVGVTVRDVVGARAAQAAGADYVGLGPVFPTSTKQVPAPVLGLEAFASVVR DSPLPVVGIGGVGLVNIASVAAAGAHCAAVVSDALLAADITERVRRLVEAFEQGRFGA
Sequences:
>Translated_218_residues MNAPSRPHLPRGPYLLCDDSVLPEISLVDKAARLVAGGARLVQLRMKRTPIREALAATRQVVALCRREGALCLVNDRVDL ALLADADGVHVGDEDVPAEDARALLGPGRLVGVTVRDVVGARAAQAAGADYVGLGPVFPTSTKQVPAPVLGLEAFASVVR DSPLPVVGIGGVGLVNIASVAAAGAHCAAVVSDALLAADITERVRRLVEAFEQGRFGA >Mature_218_residues MNAPSRPHLPRGPYLLCDDSVLPEISLVDKAARLVAGGARLVQLRMKRTPIREALAATRQVVALCRREGALCLVNDRVDL ALLADADGVHVGDEDVPAEDARALLGPGRLVGVTVRDVVGARAAQAAGADYVGLGPVFPTSTKQVPAPVLGLEAFASVVR DSPLPVVGIGGVGLVNIASVAAAGAHCAAVVSDALLAADITERVRRLVEAFEQGRFGA
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP)
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family
Homologues:
Organism=Escherichia coli, GI1790426, Length=205, Percent_Identity=37.0731707317073, Blast_Score=103, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6325042, Length=224, Percent_Identity=33.4821428571429, Blast_Score=98, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): THIE_MYXXD (Q1D282)
Other databases:
- EMBL: CP000113 - RefSeq: YP_633241.1 - ProteinModelPortal: Q1D282 - SMR: Q1D282 - STRING: Q1D282 - GeneID: 4102751 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_5087 - TIGR: MXAN_5087 - eggNOG: COG0352 - HOGENOM: HBG754477 - OMA: QRDGADY - PhylomeDB: Q1D282 - ProtClustDB: PRK00043 - BioCyc: MXAN246197:MXAN_5087-MONOMER - HAMAP: MF_00097 - InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00693
Pfam domain/function: PF02581 TMP-TENI; SSF51391 TMP_synthase
EC number: =2.5.1.3
Molecular weight: Translated: 22471; Mature: 22471
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPSRPHLPRGPYLLCDDSVLPEISLVDKAARLVAGGARLVQLRMKRTPIREALAATRQ CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH VVALCRREGALCLVNDRVDLALLADADGVHVGDEDVPAEDARALLGPGRLVGVTVRDVVG HHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHH ARAAQAAGADYVGLGPVFPTSTKQVPAPVLGLEAFASVVRDSPLPVVGIGGVGLVNIASV HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH AAAGAHCAAVVSDALLAADITERVRRLVEAFEQGRFGA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNAPSRPHLPRGPYLLCDDSVLPEISLVDKAARLVAGGARLVQLRMKRTPIREALAATRQ CCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHH VVALCRREGALCLVNDRVDLALLADADGVHVGDEDVPAEDARALLGPGRLVGVTVRDVVG HHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEHHHHHH ARAAQAAGADYVGLGPVFPTSTKQVPAPVLGLEAFASVVRDSPLPVVGIGGVGLVNIASV HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHH AAAGAHCAAVVSDALLAADITERVRRLVEAFEQGRFGA HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA