| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is yufQ [H]
Identifier: 108759119
GI number: 108759119
Start: 7081786
End: 7082715
Strand: Direct
Name: yufQ [H]
Synonym: MXAN_5714
Alternate gene names: 108759119
Gene position: 7081786-7082715 (Clockwise)
Preceding gene: 108758547
Following gene: 108759974
Centisome position: 77.48
GC content: 73.23
Gene sequence:
>930_bases GTGCTTGATGTCCTCCACTCACTGCTGTTCTCCACCCTGGACGCGGCACCGGCGCTCGTCTTCGCCGCCCTGGGCGCGGT GCTCTCCGAGCGCGCGGGCGTGATTGCCGTGGGCATGGAGGGGATGATGCGCGTGGGCGCCTTCTGCGCGGCGGTGGCGG CGCTGACGATGCCCACGCCCCTGGCCGTCGTCATGGGCATGCTCGCGGGCGCGGCCCTGGCCGGCGTGCATGGCTTCCTG AGCATCCGCTGGCGCTCGGACCAGGTGGTGTCCGGCATCGCCCTCAACCTGGTGGCCCTGGCCGGCGGCACCTTCCTGCT GGAGTCGCTCTACGGCCCCAATGGCACCCCGCCCATCCAGCAGCTCACCCGCTGGAACATCCCCGGGCTCGGCGCCGTGC CGGTGCTGGGCGCGCTGTCCGGGCACTCGGCGCCCACGTACCTGGCGCTGCTGCTGCCCTTCGCATTCCAGGGCCTGCTG ACCCGCACGCCCCTGGGCCTGCGGCTGCGCGCGGTGGGCGACAAGCCCCAGGCCGTGGCGACGCTGGGCCTGTCGGTACC GGGGCTGCGCTGGGGCGCGGTGCTGGGCAGCGGACTGCTGGCGGGCCTGGGCGGCGCGGTGCTGTCCACCGCCGTACTGG ACCGTTTCGAGCAGCACACCCCCGCGGGCCTGGGCTTCATGGCCCTGGCCGCCATGGTGTTCGGCCGGTGGACGCCCGTG GGCGCCTTCCTCGCCGCCACCTTCTTCGCCTTCGGTAACGCGCTGCGCATCGGCCTGGTGTCGAGCGCCCCCGGACTGGT CGAGCTGATCCCCCAGGGCGTCCTCCTGGCCCTCCCCTATCTGCTCACCTTGGTGGTGCTGACCCTCCAGGGCCAACGCA GCAGCGCCCCCGCCGCGCTCGGAACGCCCTACGAACAAGAGTCGCGCTGA
Upstream 100 bases:
>100_bases ATCCAGGGCCTCGCGCTGCTCTTCGTCGCCGGGCGCATGGTCTGGCTGGCGCTGCTGCGCCGGCGGAACGTGGCGCCCGC GGCGTCGGCGGAGGTGCCCC
Downstream 100 bases:
>100_bases CACTTTGCGCGCAACGAGGTCATTCCATACCCGGGTGAAAATCGATTTCGGGTCAGGAGCGACCTCGTCTTTCGTTGGCC GGATTCCAGTTGAGATAACT
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MLDVLHSLLFSTLDAAPALVFAALGAVLSERAGVIAVGMEGMMRVGAFCAAVAALTMPTPLAVVMGMLAGAALAGVHGFL SIRWRSDQVVSGIALNLVALAGGTFLLESLYGPNGTPPIQQLTRWNIPGLGAVPVLGALSGHSAPTYLALLLPFAFQGLL TRTPLGLRLRAVGDKPQAVATLGLSVPGLRWGAVLGSGLLAGLGGAVLSTAVLDRFEQHTPAGLGFMALAAMVFGRWTPV GAFLAATFFAFGNALRIGLVSSAPGLVELIPQGVLLALPYLLTLVVLTLQGQRSSAPAALGTPYEQESR
Sequences:
>Translated_309_residues MLDVLHSLLFSTLDAAPALVFAALGAVLSERAGVIAVGMEGMMRVGAFCAAVAALTMPTPLAVVMGMLAGAALAGVHGFL SIRWRSDQVVSGIALNLVALAGGTFLLESLYGPNGTPPIQQLTRWNIPGLGAVPVLGALSGHSAPTYLALLLPFAFQGLL TRTPLGLRLRAVGDKPQAVATLGLSVPGLRWGAVLGSGLLAGLGGAVLSTAVLDRFEQHTPAGLGFMALAAMVFGRWTPV GAFLAATFFAFGNALRIGLVSSAPGLVELIPQGVLLALPYLLTLVVLTLQGQRSSAPAALGTPYEQESR >Mature_309_residues MLDVLHSLLFSTLDAAPALVFAALGAVLSERAGVIAVGMEGMMRVGAFCAAVAALTMPTPLAVVMGMLAGAALAGVHGFL SIRWRSDQVVSGIALNLVALAGGTFLLESLYGPNGTPPIQQLTRWNIPGLGAVPVLGALSGHSAPTYLALLLPFAFQGLL TRTPLGLRLRAVGDKPQAVATLGLSVPGLRWGAVLGSGLLAGLGGAVLSTAVLDRFEQHTPAGLGFMALAAMVFGRWTPV GAFLAATFFAFGNALRIGLVSSAPGLVELIPQGVLLALPYLLTLVVLTLQGQRSSAPAALGTPYEQESR
Specific function: Part of the binding-protein-dependent transport system. Probably responsible for the translocation of the substrates across the membrane [H]
COG id: COG1079
COG function: function code R; Uncharacterized ABC-type transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 31566; Mature: 31566
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDVLHSLLFSTLDAAPALVFAALGAVLSERAGVIAVGMEGMMRVGAFCAAVAALTMPTP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCH LAVVMGMLAGAALAGVHGFLSIRWRSDQVVSGIALNLVALAGGTFLLESLYGPNGTPPIQ HHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH QLTRWNIPGLGAVPVLGALSGHSAPTYLALLLPFAFQGLLTRTPLGLRLRAVGDKPQAVA HHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH TLGLSVPGLRWGAVLGSGLLAGLGGAVLSTAVLDRFEQHTPAGLGFMALAAMVFGRWTPV EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH GAFLAATFFAFGNALRIGLVSSAPGLVELIPQGVLLALPYLLTLVVLTLQGQRSSAPAAL HHHHHHHHHHHCCHHEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC GTPYEQESR CCCCCCCCC >Mature Secondary Structure MLDVLHSLLFSTLDAAPALVFAALGAVLSERAGVIAVGMEGMMRVGAFCAAVAALTMPTP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCCH LAVVMGMLAGAALAGVHGFLSIRWRSDQVVSGIALNLVALAGGTFLLESLYGPNGTPPIQ HHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH QLTRWNIPGLGAVPVLGALSGHSAPTYLALLLPFAFQGLLTRTPLGLRLRAVGDKPQAVA HHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHH TLGLSVPGLRWGAVLGSGLLAGLGGAVLSTAVLDRFEQHTPAGLGFMALAAMVFGRWTPV EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH GAFLAATFFAFGNALRIGLVSSAPGLVELIPQGVLLALPYLLTLVVLTLQGQRSSAPAAL HHHHHHHHHHHCCHHEEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC GTPYEQESR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]