| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759116
Identifier: 108759116
GI number: 108759116
Start: 5332954
End: 5333880
Strand: Reverse
Name: 108759116
Synonym: MXAN_4334
Alternate gene names: NA
Gene position: 5333880-5332954 (Counterclockwise)
Preceding gene: 108762897
Following gene: 108760095
Centisome position: 58.36
GC content: 71.63
Gene sequence:
>927_bases GTGCCGCGCCGTCTCCTCCTGGCGGTGCTGGCCGGAGTGCTGGGCGCGTGCTCCCGCTCCAAGCCGCCGCCCGCGCCGCC TCCACCCGAGGCGACGAACCAGGTCCCTGCCCAGGGCGTGCCGGGGTGCACGCTCTACGGCGAGCCTCAGCGGTTCGGCA CCGTGCCCGACGTGCTGCCCGAGCTCTCCGGCCTGGCCGCCAGCCAGCGCCACCCGGGGGCCTTCTGGGCGCACAACGAC TCCGGCAACGGCTTCGAGCTGTTCGCGATGGACGCGAAGGGCGGCATCCTCGCCCGGCTGACGCTCACCGGGGCCACCCC TCGCGACATCGAGGACGTCACCGTGGGGCCCTGCGCCTCGGGGGCGTCGCGCCGCTGCGTCTATCTTGCGGACATCGGTG ACAACTTCGCGCGCCGGGAGCAGGTGCGGCTCTACCGGCTGCCAGAACCGGAGGCGCTCGAGGATGCCACGGTGCCGGTG GACGTACTGTCCTTCATGTACCCGGGCGGGCCCCGCGACGCGGAGTCGGTCATCATCGACGCCCGCTCTGGCCGGTTGGC CGTCATCACCAAGACGCTGGACTCCCTGGGAGATGTCTTCGCGCTGGATGGCCTGAGCGCGGAGACCCCCATCCAGGCCC GGAAGCTGGGGACGCTGACGGCGCCGCTCGGGATGGACCGGGCCACCACCGCGGCCTCCCTGCATCCCTCCGGTGAGCGG CTGCTGCTGCGCACCTACTCGCGCGCGTACGAGCTGCGCCGCCCCGGCGCCGCGCGGCTGGAGGACCTGTTGCAAGGAGA GCTCGTCGAGGTTCCGAGCGGGAGCCAAGCCCAGGCAGAAGCCATCACCTTCGTGCAAGACGGCAACGGCTATTTGTTGG GCACGGAGTTCACTGGCCAACCCTTGTGGCTCATCGGGTGTCGCTGA
Upstream 100 bases:
>100_bases CATGACCACCGCTGGGTGACGCTGGAGGAGATGTCCGCGTACCGCTTCCCGGACGCGGATGCCAAGACGCTGGCGAAGCT GCTCGACCTGGACAACTGAC
Downstream 100 bases:
>100_bases TTCGGCGCAAGGGCCCGCACATAGCGTGAAGCCCGCCTGGCGGGTTGACGGTATGGCAACGGTGAACATCTTTGGCCCGC CAGGGAAGACGCCTCGCGGT
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein; PE-PGRS Family Protein; Carboxypeptidase C; Cell Wall Surface Anchor Family Protein
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPRRLLLAVLAGVLGACSRSKPPPAPPPPEATNQVPAQGVPGCTLYGEPQRFGTVPDVLPELSGLAASQRHPGAFWAHND SGNGFELFAMDAKGGILARLTLTGATPRDIEDVTVGPCASGASRRCVYLADIGDNFARREQVRLYRLPEPEALEDATVPV DVLSFMYPGGPRDAESVIIDARSGRLAVITKTLDSLGDVFALDGLSAETPIQARKLGTLTAPLGMDRATTAASLHPSGER LLLRTYSRAYELRRPGAARLEDLLQGELVEVPSGSQAQAEAITFVQDGNGYLLGTEFTGQPLWLIGCR
Sequences:
>Translated_308_residues MPRRLLLAVLAGVLGACSRSKPPPAPPPPEATNQVPAQGVPGCTLYGEPQRFGTVPDVLPELSGLAASQRHPGAFWAHND SGNGFELFAMDAKGGILARLTLTGATPRDIEDVTVGPCASGASRRCVYLADIGDNFARREQVRLYRLPEPEALEDATVPV DVLSFMYPGGPRDAESVIIDARSGRLAVITKTLDSLGDVFALDGLSAETPIQARKLGTLTAPLGMDRATTAASLHPSGER LLLRTYSRAYELRRPGAARLEDLLQGELVEVPSGSQAQAEAITFVQDGNGYLLGTEFTGQPLWLIGCR >Mature_307_residues PRRLLLAVLAGVLGACSRSKPPPAPPPPEATNQVPAQGVPGCTLYGEPQRFGTVPDVLPELSGLAASQRHPGAFWAHNDS GNGFELFAMDAKGGILARLTLTGATPRDIEDVTVGPCASGASRRCVYLADIGDNFARREQVRLYRLPEPEALEDATVPVD VLSFMYPGGPRDAESVIIDARSGRLAVITKTLDSLGDVFALDGLSAETPIQARKLGTLTAPLGMDRATTAASLHPSGERL LLRTYSRAYELRRPGAARLEDLLQGELVEVPSGSQAQAEAITFVQDGNGYLLGTEFTGQPLWLIGCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32711; Mature: 32579
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRRLLLAVLAGVLGACSRSKPPPAPPPPEATNQVPAQGVPGCTLYGEPQRFGTVPDVLP CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCHHHHHH ELSGLAASQRHPGAFWAHNDSGNGFELFAMDAKGGILARLTLTGATPRDIEDVTVGPCAS HHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC GASRRCVYLADIGDNFARREQVRLYRLPEPEALEDATVPVDVLSFMYPGGPRDAESVIID CCCCCEEEEEECCCCHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEE ARSGRLAVITKTLDSLGDVFALDGLSAETPIQARKLGTLTAPLGMDRATTAASLHPSGER CCCCCEEEEEHHHHHHCCEEEECCCCCCCCCHHHHCCCEECCCCCCCCCCEEECCCCCCE LLLRTYSRAYELRRPGAARLEDLLQGELVEVPSGSQAQAEAITFVQDGNGYLLGTEFTGQ EHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCEEEEEEECCCC PLWLIGCR CEEEEECC >Mature Secondary Structure PRRLLLAVLAGVLGACSRSKPPPAPPPPEATNQVPAQGVPGCTLYGEPQRFGTVPDVLP CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHCCCHHHHHH ELSGLAASQRHPGAFWAHNDSGNGFELFAMDAKGGILARLTLTGATPRDIEDVTVGPCAS HHHCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCC GASRRCVYLADIGDNFARREQVRLYRLPEPEALEDATVPVDVLSFMYPGGPRDAESVIID CCCCCEEEEEECCCCHHHHHCEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEE ARSGRLAVITKTLDSLGDVFALDGLSAETPIQARKLGTLTAPLGMDRATTAASLHPSGER CCCCCEEEEEHHHHHHCCEEEECCCCCCCCCHHHHCCCEECCCCCCCCCCEEECCCCCCE LLLRTYSRAYELRRPGAARLEDLLQGELVEVPSGSQAQAEAITFVQDGNGYLLGTEFTGQ EHHHHHHHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCEEEEEEECCCC PLWLIGCR CEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA