| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759112
Identifier: 108759112
GI number: 108759112
Start: 473242
End: 474039
Strand: Reverse
Name: 108759112
Synonym: MXAN_0412
Alternate gene names: NA
Gene position: 474039-473242 (Counterclockwise)
Preceding gene: 108758574
Following gene: 108757424
Centisome position: 5.19
GC content: 67.04
Gene sequence:
>798_bases ATGGCACGCATGCACGAAGTGGACTTCCACATCTACGGCGAGGACCTGCAGTTCGTCGAGGTGGAGTTGGACCCAGGAGA AGCCGCGGTCGCCGAAGCCGGCACGCTCATGTACATGGAGGACGGCATCGAGATGGAGACCATCTTCGGTGACGGCTCGG AGAAGACGAGCGGCTTCTTCGGCTCGCTGCTCGGCGCAGGCAAGCGCCTGCTGACGGGTGAGTCCCTCTTCACCACTGTC TTCCTCAACAAGAGCGGTAGCGGCAAGCGCAAGGTGTCCTTCGCCGCGCCCTACCCGGGAAAAATCATCCCGGTGAACCT GAGTGAGCTCGGCGGCGAGCTCATTGCGCAGAAGGACAGCTTCCTCGCCGCGGCCAAGGGCGTCTCGCTGGGCATCGCCT TCCAGAAGAAGCTGGGCACCGGCCTGTTCGGCGGCGAGGGCTTCATCATGCAGCGGCTCCAGGGTGACGGGCTCGCCTTC ATCCACGCCGGCGGCACGCTGCACGAGCGCACGCTGGGCCCGGGTGAAATGCTGCGCGTGGACACCGGCTGCATCGTCGC GTTCCAGCCCACCGTGGACTACGACATCCAGATGGTGAGCGGCATCAAGACGGCCTTCTTCGGCGGCGAGGGCCTCTTCT TCGCCACGCTGCGCGGCCCCGGCAAGGTGTGGCTCCAGTCGCTCCCGTTCAGCCGGCTCGCGGGCCGCATTCTCTCCGCC TCGCGCCCGGGTGGCGCTCGCGACGAGGGCAGCGTGCTGGGTGGCGTCGGCCTGGGCAGCCTGCTCGGAGACGACTAG
Upstream 100 bases:
>100_bases CGACGCCCGGCTCGTGGCCACCCTGGCTTTGATTCTGTCGCGGTAGCCCCACCGCGGGCGGCTATGGTGCGCGCCGTTTC CCTCACGACGGAGCGCATCC
Downstream 100 bases:
>100_bases CGCACCGGGCAGGCCGGCCGTTCGCGGACCGCTATCCGCGCCGCCGCCGCGACAGGCCGGCCAGTCCCGCCAGCAGCACC CAGGAGCCCACCACGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MARMHEVDFHIYGEDLQFVEVELDPGEAAVAEAGTLMYMEDGIEMETIFGDGSEKTSGFFGSLLGAGKRLLTGESLFTTV FLNKSGSGKRKVSFAAPYPGKIIPVNLSELGGELIAQKDSFLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQGDGLAF IHAGGTLHERTLGPGEMLRVDTGCIVAFQPTVDYDIQMVSGIKTAFFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSA SRPGGARDEGSVLGGVGLGSLLGDD
Sequences:
>Translated_265_residues MARMHEVDFHIYGEDLQFVEVELDPGEAAVAEAGTLMYMEDGIEMETIFGDGSEKTSGFFGSLLGAGKRLLTGESLFTTV FLNKSGSGKRKVSFAAPYPGKIIPVNLSELGGELIAQKDSFLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQGDGLAF IHAGGTLHERTLGPGEMLRVDTGCIVAFQPTVDYDIQMVSGIKTAFFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSA SRPGGARDEGSVLGGVGLGSLLGDD >Mature_264_residues ARMHEVDFHIYGEDLQFVEVELDPGEAAVAEAGTLMYMEDGIEMETIFGDGSEKTSGFFGSLLGAGKRLLTGESLFTTVF LNKSGSGKRKVSFAAPYPGKIIPVNLSELGGELIAQKDSFLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQGDGLAFI HAGGTLHERTLGPGEMLRVDTGCIVAFQPTVDYDIQMVSGIKTAFFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSAS RPGGARDEGSVLGGVGLGSLLGDD
Specific function: Unknown
COG id: COG2013
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002838 - InterPro: IPR016031 [H]
Pfam domain/function: PF01987 DUF124 [H]
EC number: NA
Molecular weight: Translated: 27879; Mature: 27748
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMHEVDFHIYGEDLQFVEVELDPGEAAVAEAGTLMYMEDGIEMETIFGDGSEKTSGFF CCCEEEEEEEEECCCEEEEEEEECCCCCHHHCCCEEEEEECCCEEEEEECCCCCCCCHHH GSLLGAGKRLLTGESLFTTVFLNKSGSGKRKVSFAAPYPGKIIPVNLSELGGELIAQKDS HHHHHCCCEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEHHHHCCHHEECCCC FLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQGDGLAFIHAGGTLHERTLGPGEMLRV CEEECCCCEEEEEEHHHCCCCEECCCCCEEEEECCCCEEEEECCCCEEECCCCCCCEEEE DTGCIVAFQPTVDYDIQMVSGIKTAFFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSA ECCEEEEEECCCCCCEEEECCCEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHC SRPGGARDEGSVLGGVGLGSLLGDD CCCCCCCCCCCEEECCCCCHHCCCC >Mature Secondary Structure ARMHEVDFHIYGEDLQFVEVELDPGEAAVAEAGTLMYMEDGIEMETIFGDGSEKTSGFF CCEEEEEEEEECCCEEEEEEEECCCCCHHHCCCEEEEEECCCEEEEEECCCCCCCCHHH GSLLGAGKRLLTGESLFTTVFLNKSGSGKRKVSFAAPYPGKIIPVNLSELGGELIAQKDS HHHHHCCCEEEECCCEEEEEEEECCCCCCEEEEEECCCCCCEEEEEHHHHCCHHEECCCC FLAAAKGVSLGIAFQKKLGTGLFGGEGFIMQRLQGDGLAFIHAGGTLHERTLGPGEMLRV CEEECCCCEEEEEEHHHCCCCEECCCCCEEEEECCCCEEEEECCCCEEECCCCCCCEEEE DTGCIVAFQPTVDYDIQMVSGIKTAFFGGEGLFFATLRGPGKVWLQSLPFSRLAGRILSA ECCEEEEEECCCCCCEEEECCCEEEEECCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHC SRPGGARDEGSVLGGVGLGSLLGDD CCCCCCCCCCCEEECCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA