| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108759084
Identifier: 108759084
GI number: 108759084
Start: 1334825
End: 1335655
Strand: Direct
Name: 108759084
Synonym: MXAN_1144
Alternate gene names: NA
Gene position: 1334825-1335655 (Clockwise)
Preceding gene: 108758188
Following gene: 108759434
Centisome position: 14.6
GC content: 70.88
Gene sequence:
>831_bases ATGAGCAAGTGGATATTGTGGCTGTTCCTCACCCTGCTGACGGGCAGCCCGCTGCTGTCGCTGGGCCTCATCATCGTCAT CATCTTCGTGGCGGACCGCTTCACGTGGCAGGTGCTGCCCAGCCCGGTGCGGCTGCTCAAGCGCTTCCAGCGCGCGGGGC AACTGGCGGGCACCATCCTCACCAACCCGCATGAGCGGCGCGCGCGGCACGAACTGGCGGACATCCGCGTGGAGCAGCGC CGCTACGCCGAGGCGGTGGACATCCTCAAGCCCAACCTGGAGGCGGGCGACGAGGACGTGGATACGCTGTACCTGCTGGG CGTGGCCTACCTGGGCGCCGGGGACGCGCAGCGCGGCGAGCTGCTGCTGGACGAGGCGGCGAAGCTGGACCCGGACCACA AGCTGGGCGCCATCGACCTGGAGCGCGGCCGTTTCCGGCTGAAGCGCGGCGACGTGCCGGGCGCGGTGGAGGCGCTGGAG CGCTACTGCAAGGTGCGACACGGCACGGTGGAAGGCCGCTACCTGCTCGCCAAGGCCCTGAGCCGGGCGGGCCGCGGCGA CGACGCGAAGCGGATGCGCGACCTGGCCTGGTCCGAATACGTGGTGGCGCCCCGGTTCCAGCGGCGCCGGGAGCGCAAGT GGGCCTGGCGCGCGCGGCCCAGCCGGCCGTTGATGTACGCGGCGGCCGTGGCCCTGGTGCTGAGCCTGCTGGCGTCCATG TTGCCCCGGTTCGTAATAACCCCAGAGGGAGACTACGGCGGCCGCTACGACCATGGCGCGTATGGCGAGCCACCCAGTGC GGTGGGGATGGAGGAGTACCAGGGCGAGTAG
Upstream 100 bases:
>100_bases CGGGCGGCTGGCATTGACGGAGAAGGGCGCGGACGTCCACAGCGCCGTGTGCGCGCGGCTGCTCTAGGCGGCGTCCACTG GAACGGATTTCGAGAGGCGT
Downstream 100 bases:
>100_bases CGCTAGGCTCTCGCCCATGTTCCCCACGCCGTCGCAGGTCCTCCGCCAGCGGGAGGGAGTGCTGGCCGATACGCCGTTCC CCCTGCTGCTTCACGCGCTG
Product: TPR domain-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tpr Domain Protein
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSKWILWLFLTLLTGSPLLSLGLIIVIIFVADRFTWQVLPSPVRLLKRFQRAGQLAGTILTNPHERRARHELADIRVEQR RYAEAVDILKPNLEAGDEDVDTLYLLGVAYLGAGDAQRGELLLDEAAKLDPDHKLGAIDLERGRFRLKRGDVPGAVEALE RYCKVRHGTVEGRYLLAKALSRAGRGDDAKRMRDLAWSEYVVAPRFQRRRERKWAWRARPSRPLMYAAAVALVLSLLASM LPRFVITPEGDYGGRYDHGAYGEPPSAVGMEEYQGE
Sequences:
>Translated_276_residues MSKWILWLFLTLLTGSPLLSLGLIIVIIFVADRFTWQVLPSPVRLLKRFQRAGQLAGTILTNPHERRARHELADIRVEQR RYAEAVDILKPNLEAGDEDVDTLYLLGVAYLGAGDAQRGELLLDEAAKLDPDHKLGAIDLERGRFRLKRGDVPGAVEALE RYCKVRHGTVEGRYLLAKALSRAGRGDDAKRMRDLAWSEYVVAPRFQRRRERKWAWRARPSRPLMYAAAVALVLSLLASM LPRFVITPEGDYGGRYDHGAYGEPPSAVGMEEYQGE >Mature_275_residues SKWILWLFLTLLTGSPLLSLGLIIVIIFVADRFTWQVLPSPVRLLKRFQRAGQLAGTILTNPHERRARHELADIRVEQRR YAEAVDILKPNLEAGDEDVDTLYLLGVAYLGAGDAQRGELLLDEAAKLDPDHKLGAIDLERGRFRLKRGDVPGAVEALER YCKVRHGTVEGRYLLAKALSRAGRGDDAKRMRDLAWSEYVVAPRFQRRRERKWAWRARPSRPLMYAAAVALVLSLLASML PRFVITPEGDYGGRYDHGAYGEPPSAVGMEEYQGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31161; Mature: 31030
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKWILWLFLTLLTGSPLLSLGLIIVIIFVADRFTWQVLPSPVRLLKRFQRAGQLAGTIL CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH TNPHERRARHELADIRVEQRRYAEAVDILKPNLEAGDEDVDTLYLLGVAYLGAGDAQRGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH LLLDEAAKLDPDHKLGAIDLERGRFRLKRGDVPGAVEALERYCKVRHGTVEGRYLLAKAL HHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH SRAGRGDDAKRMRDLAWSEYVVAPRFQRRRERKWAWRARPSRPLMYAAAVALVLSLLASM HHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LPRFVITPEGDYGGRYDHGAYGEPPSAVGMEEYQGE CCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure SKWILWLFLTLLTGSPLLSLGLIIVIIFVADRFTWQVLPSPVRLLKRFQRAGQLAGTIL CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHH TNPHERRARHELADIRVEQRRYAEAVDILKPNLEAGDEDVDTLYLLGVAYLGAGDAQRGE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCH LLLDEAAKLDPDHKLGAIDLERGRFRLKRGDVPGAVEALERYCKVRHGTVEGRYLLAKAL HHHHHHHCCCCCCCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH SRAGRGDDAKRMRDLAWSEYVVAPRFQRRRERKWAWRARPSRPLMYAAAVALVLSLLASM HHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LPRFVITPEGDYGGRYDHGAYGEPPSAVGMEEYQGE CCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA