| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759053
Identifier: 108759053
GI number: 108759053
Start: 5069387
End: 5070793
Strand: Direct
Name: 108759053
Synonym: MXAN_4128
Alternate gene names: NA
Gene position: 5069387-5070793 (Clockwise)
Preceding gene: 108759169
Following gene: 108763482
Centisome position: 55.47
GC content: 67.73
Gene sequence:
>1407_bases GTGGGACATGGGACACACCCCGTCGTGGCCGAGGTCGACCCCAAGGATGCGCGCATCGCGGAACTTGAGCGTCAGGTCGA GGAGCTGACTCGACTGGTGCAGGAGCTGCGGGAGCAGTTGCGGCGAGATTCGGGCAACTCGAACCGGCCGCCGTCGAGCG ATACGCCGGGGCAGAAGGCCGTGCGACGCAGGCAGAGCGGCAGTGAGAAGAAGCGCGGTGGCCAGCCGGGGCACGTGGGA CTGACACGCGCGCTTGTTGCCGAGGAGAAGGTGAGCGAGTTCAAGCACCTCTTCCCGTCCGCGTGTGGGAATTGCTGGGC TCCTCTCTCGCCCGAAGGTGGCACGCGGGTGCGGCGCTACCAGTCCGTGGAATTGCCGCCGCTCAAGGCCCACGTCACGC AGTGGATGCGCCATGGCGTGGAGTGCCCCAGGTGCAAGCATGAGACGTGGGCAAGCACCGCGGCGATTCCGACGTCGGCC TTCGGCCCGCGGCTGTCCGCCGTCGTTGGCCTTTTGACGGGCGTCTACCACCTGAGTCGGCGCTCGGCGGTGAGGCTTCT GGGGGATGTGCTGGGCATCGACATTTCGCTGGGGGCAGTGAGCGCCGTCGAGGCGCGCGTCAGCGAGGCGGTGAAGCCCG CGGTGGACGAGGCCTGGTCCCGGGTGTTGTTGGCGCCGGTGAAGCACACGGACGGCACGCAGTGGCTTGAGGCCGGCCTG GCGCGCACGCTATGGACCATCGCCTCGTCAATGGCCACCGTCTTCAAGATTCTGGCGGACAGCAAGTCACGGACACTTGC GCCGCTCTTCGGCCAGAAACTCGGCGTCCTCGTGAGCGACCGCGCCACCGCGCTGAATTTCTGGGCCATGGAAGCGCGGC AGGTGTGCTGGGCCCACCTCTTGAGGAAGGCCGTTTCATTCTCGGAGCGTGACGGGCCAGCCGGAGCGATTGGGCGCGAG CTACTCGACTACATCGGCATCCTCTTCGACTATTGGGGACGACTGCGCAGCGGCGAGTTGCAGCGGGACACGCTGCGTGA GCGCATGGCCTCGGTGCGCACGCAGGTGGAAGCCTTGCTTGAGCGCGCCGTGGCCGCGAGGCTGCCGCACGTCTCTGGCT CCTGTGAGGACATCCTCCAGCACCGGGCGGCGCTGTGGACTTTCGTTGACAGGGAGGGCGTCGAGCCCACCAACAACCAT GCCGAGCGCGAGCTGCGGGCCTTCGTCCTGTGGCGCAAGCGAAGCTTCGGCACCCAGAGCCCTCGGGGGAACCTCTTCGC CGAGAGGGTGATGACGGTGGCGCATACCGCCCGCAAGCAGGAAAAGAATGTGCTCGAGTTCCTGACGGCCTGCTGCACCG CCGCCCGGACGGGGATGCCCGCGCCCTCGCTCTTCGCCGCGCCCTGA
Upstream 100 bases:
>100_bases CGATTCTGCTAGAGGTTTCGGTAAGCGTTCAGGGGTGATGGGCGGCTGAAGAAGGAGCAGGCCAGCAGTCGGCGGGAGGC CTGTCGCTCGCTGACGCGGC
Downstream 100 bases:
>100_bases GCGCTACGCGGCCTTCTTTCACATCGGGAAGTACCTCGTCGCGTTTCGCTCACCCGCCCTGCGCACACGGCCCTCTTGCT TCAGGCGCATCATCGGCCGA
Product: transposase
Products: NA
Alternate protein names: Transposase IS; Transposase Is; Transposase And Inactivated Derivative
Number of amino acids: Translated: 468; Mature: 467
Protein sequence:
>468_residues MGHGTHPVVAEVDPKDARIAELERQVEELTRLVQELREQLRRDSGNSNRPPSSDTPGQKAVRRRQSGSEKKRGGQPGHVG LTRALVAEEKVSEFKHLFPSACGNCWAPLSPEGGTRVRRYQSVELPPLKAHVTQWMRHGVECPRCKHETWASTAAIPTSA FGPRLSAVVGLLTGVYHLSRRSAVRLLGDVLGIDISLGAVSAVEARVSEAVKPAVDEAWSRVLLAPVKHTDGTQWLEAGL ARTLWTIASSMATVFKILADSKSRTLAPLFGQKLGVLVSDRATALNFWAMEARQVCWAHLLRKAVSFSERDGPAGAIGRE LLDYIGILFDYWGRLRSGELQRDTLRERMASVRTQVEALLERAVAARLPHVSGSCEDILQHRAALWTFVDREGVEPTNNH AERELRAFVLWRKRSFGTQSPRGNLFAERVMTVAHTARKQEKNVLEFLTACCTAARTGMPAPSLFAAP
Sequences:
>Translated_468_residues MGHGTHPVVAEVDPKDARIAELERQVEELTRLVQELREQLRRDSGNSNRPPSSDTPGQKAVRRRQSGSEKKRGGQPGHVG LTRALVAEEKVSEFKHLFPSACGNCWAPLSPEGGTRVRRYQSVELPPLKAHVTQWMRHGVECPRCKHETWASTAAIPTSA FGPRLSAVVGLLTGVYHLSRRSAVRLLGDVLGIDISLGAVSAVEARVSEAVKPAVDEAWSRVLLAPVKHTDGTQWLEAGL ARTLWTIASSMATVFKILADSKSRTLAPLFGQKLGVLVSDRATALNFWAMEARQVCWAHLLRKAVSFSERDGPAGAIGRE LLDYIGILFDYWGRLRSGELQRDTLRERMASVRTQVEALLERAVAARLPHVSGSCEDILQHRAALWTFVDREGVEPTNNH AERELRAFVLWRKRSFGTQSPRGNLFAERVMTVAHTARKQEKNVLEFLTACCTAARTGMPAPSLFAAP >Mature_467_residues GHGTHPVVAEVDPKDARIAELERQVEELTRLVQELREQLRRDSGNSNRPPSSDTPGQKAVRRRQSGSEKKRGGQPGHVGL TRALVAEEKVSEFKHLFPSACGNCWAPLSPEGGTRVRRYQSVELPPLKAHVTQWMRHGVECPRCKHETWASTAAIPTSAF GPRLSAVVGLLTGVYHLSRRSAVRLLGDVLGIDISLGAVSAVEARVSEAVKPAVDEAWSRVLLAPVKHTDGTQWLEAGLA RTLWTIASSMATVFKILADSKSRTLAPLFGQKLGVLVSDRATALNFWAMEARQVCWAHLLRKAVSFSERDGPAGAIGREL LDYIGILFDYWGRLRSGELQRDTLRERMASVRTQVEALLERAVAARLPHVSGSCEDILQHRAALWTFVDREGVEPTNNHA ERELRAFVLWRKRSFGTQSPRGNLFAERVMTVAHTARKQEKNVLEFLTACCTAARTGMPAPSLFAAP
Specific function: Unknown
COG id: COG3436
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51668; Mature: 51536
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHGTHPVVAEVDPKDARIAELERQVEELTRLVQELREQLRRDSGNSNRPPSSDTPGQKA CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH VRRRQSGSEKKRGGQPGHVGLTRALVAEEKVSEFKHLFPSACGNCWAPLSPEGGTRVRRY HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH QSVELPPLKAHVTQWMRHGVECPRCKHETWASTAAIPTSAFGPRLSAVVGLLTGVYHLSR HCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHH RSAVRLLGDVLGIDISLGAVSAVEARVSEAVKPAVDEAWSRVLLAPVKHTDGTQWLEAGL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ARTLWTIASSMATVFKILADSKSRTLAPLFGQKLGVLVSDRATALNFWAMEARQVCWAHL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LRKAVSFSERDGPAGAIGRELLDYIGILFDYWGRLRSGELQRDTLRERMASVRTQVEALL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERAVAARLPHVSGSCEDILQHRAALWTFVDREGVEPTNNHAERELRAFVLWRKRSFGTQS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC PRGNLFAERVMTVAHTARKQEKNVLEFLTACCTAARTGMPAPSLFAAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GHGTHPVVAEVDPKDARIAELERQVEELTRLVQELREQLRRDSGNSNRPPSSDTPGQKA CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH VRRRQSGSEKKRGGQPGHVGLTRALVAEEKVSEFKHLFPSACGNCWAPLSPEGGTRVRRY HHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH QSVELPPLKAHVTQWMRHGVECPRCKHETWASTAAIPTSAFGPRLSAVVGLLTGVYHLSR HCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHH RSAVRLLGDVLGIDISLGAVSAVEARVSEAVKPAVDEAWSRVLLAPVKHTDGTQWLEAGL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ARTLWTIASSMATVFKILADSKSRTLAPLFGQKLGVLVSDRATALNFWAMEARQVCWAHL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LRKAVSFSERDGPAGAIGRELLDYIGILFDYWGRLRSGELQRDTLRERMASVRTQVEALL HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ERAVAARLPHVSGSCEDILQHRAALWTFVDREGVEPTNNHAERELRAFVLWRKRSFGTQS HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC PRGNLFAERVMTVAHTARKQEKNVLEFLTACCTAARTGMPAPSLFAAP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA