| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is 108759017
Identifier: 108759017
GI number: 108759017
Start: 3299884
End: 3300918
Strand: Reverse
Name: 108759017
Synonym: MXAN_2831
Alternate gene names: NA
Gene position: 3300918-3299884 (Counterclockwise)
Preceding gene: 108759782
Following gene: 108762718
Centisome position: 36.12
GC content: 69.18
Gene sequence:
>1035_bases GTGAGCGGACGCCTCTTGAAACTGTTGGGCTGCGCGGTGCTTCTCGTGGCCGCGGGTGCCTGCTCGCGCCAGAAGGAGGA GCCCAAGCAGGGCTCCCAGGCCGCAACGGGGGCCAGCACCGCCCCGCCGAAGGCGGACGCCCCGGCCAAGGTGCGGCTCG CGCTCAACTGGGTGCCGGAGCCCGAATTCGGCGGCTTCTATGCGGCGCGGGAGTCGGGGGCCTTCTCCCGCCATGGGCTC GAGGCGGAGATCCTCGGCGGCGGAGCCGGCGCCCCCGTGCCGCAGATGGTGGCCACCGGCAAGGTGGAGTTCGGCATCAG CGGCGCCGACGAGCTCCTCGTCGCGCGGGCCCGAGGCCTGGACGTGATTCCGCTGTTCGCGGTGTATCAGACGTCTCCGC ACGCCATCATGGCCCACGCATCTCGGGGGGCGAAGAACATCGCGGACGTGCTGTCCTCGGGCACAGTGGCGCTGGAGCCG GGCCTCTCCTACGTGGCCTTCCTCAAGAAGAAGTACAGCTTCGACAAGGTGAAGGTGGTGCCCTACGACGGGGGCGTCGC GCGCTTCCTGGCGGACAAGGACTTCGCCCAGCAGTGCTTCGTCACCGCCGAGCCCATCGCCGCGAAGCGGCAGGGCGCCA CGCCAACGGTGTTCCTGGTGGCCGAGGAGGGCTTCAACCCGTACCTCGCCGTGGTCATCACGCGGCGCCAGTACTGGAAG GAACAGCCCGAGCGGGTGAAGTCCTTCGTGGCGGCGGTGCGCGAGGGGTGGCGGACCTACCTGGACAACCCGGGGCCCAC CAACGCGGTGATGGGAAAGCTGAATACGACGATGGACGCGGAGACGTTCGCGGAGGGGGCCGAGACACAGAAGCCGCTCA TCGAGACGGAGGAGACGCGAGCCCGAGGACTGGGCACGATGAACCGCCAGCGGTGGGAGCAATTGGCCCAGCAGCTCGTG GAGCTGGACCTCATCGAGAAGGCGCCCGCCGCGGACGAGTTCCTGCTGCCGGAGTTCACCGGCTCACGCGATTAA
Upstream 100 bases:
>100_bases TTGGTGTTGTTCGGTGTCGTGAGCCTCACCGGCGCCCGGCTGCTGCGGCGCTGGCACCCGTCGGCGCAGGGAACATGAAT CGCCTGGAAAGGAGCTGGAC
Downstream 100 bases:
>100_bases AGCGGCACGGAGCCGTATCAGCCAAGAGCCGCTCACCTCGCTCGAATATCCTCCAGCCCGGTGACCCGGGATGCGTAACC GTCCGGCCAACGACGTGCCG
Product: putative lipoprotein
Products: NA
Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; NMT1/THI5 Like Domain-Containing Protein; NMT1/THI5 Like Family; Diguanylate Cyclase; Histidine Kinase; Permease Protein Of ABC Transporter; Secreted Protein; GGDEF Domain-Containing Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; PAS Sensor Protein; Diguanylate Cyclase/Phosphodiesterase; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; Diguanylate Cyclase With PAS/PAC Sensor; Pyrimidine Biosynthesis; Pyrimidine Biosynthesis ; ABC Transporter Permease; PAS/GGDEF Domain-Containing Protein; PAS/PAC Sensor Signal Transduction Histidine Kinase; Diguanylate Cyclase With Extracellular Sensor; PasGgdef; PAS/PAC Sensor Hybrid Histidine Kinase; Diguanylate Cyclase Domain Protein; Pyrimidine Biosynthesis; PAS/PAC Sensor-Containg Diguanylate Cyclase; NMT1/THI5-Ike Domain-Containing Protein; PAS/PAC Sensor-Containing Diguanylate Cyclase; Lipoprotein; Multi-Sensor Signal Transduction Histidine Kinase
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MSGRLLKLLGCAVLLVAAGACSRQKEEPKQGSQAATGASTAPPKADAPAKVRLALNWVPEPEFGGFYAARESGAFSRHGL EAEILGGGAGAPVPQMVATGKVEFGISGADELLVARARGLDVIPLFAVYQTSPHAIMAHASRGAKNIADVLSSGTVALEP GLSYVAFLKKKYSFDKVKVVPYDGGVARFLADKDFAQQCFVTAEPIAAKRQGATPTVFLVAEEGFNPYLAVVITRRQYWK EQPERVKSFVAAVREGWRTYLDNPGPTNAVMGKLNTTMDAETFAEGAETQKPLIETEETRARGLGTMNRQRWEQLAQQLV ELDLIEKAPAADEFLLPEFTGSRD
Sequences:
>Translated_344_residues MSGRLLKLLGCAVLLVAAGACSRQKEEPKQGSQAATGASTAPPKADAPAKVRLALNWVPEPEFGGFYAARESGAFSRHGL EAEILGGGAGAPVPQMVATGKVEFGISGADELLVARARGLDVIPLFAVYQTSPHAIMAHASRGAKNIADVLSSGTVALEP GLSYVAFLKKKYSFDKVKVVPYDGGVARFLADKDFAQQCFVTAEPIAAKRQGATPTVFLVAEEGFNPYLAVVITRRQYWK EQPERVKSFVAAVREGWRTYLDNPGPTNAVMGKLNTTMDAETFAEGAETQKPLIETEETRARGLGTMNRQRWEQLAQQLV ELDLIEKAPAADEFLLPEFTGSRD >Mature_343_residues SGRLLKLLGCAVLLVAAGACSRQKEEPKQGSQAATGASTAPPKADAPAKVRLALNWVPEPEFGGFYAARESGAFSRHGLE AEILGGGAGAPVPQMVATGKVEFGISGADELLVARARGLDVIPLFAVYQTSPHAIMAHASRGAKNIADVLSSGTVALEPG LSYVAFLKKKYSFDKVKVVPYDGGVARFLADKDFAQQCFVTAEPIAAKRQGATPTVFLVAEEGFNPYLAVVITRRQYWKE QPERVKSFVAAVREGWRTYLDNPGPTNAVMGKLNTTMDAETFAEGAETQKPLIETEETRARGLGTMNRQRWEQLAQQLVE LDLIEKAPAADEFLLPEFTGSRD
Specific function: Unknown
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36986; Mature: 36854
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLLKLLGCAVLLVAAGACSRQKEEPKQGSQAATGASTAPPKADAPAKVRLALNWVPE CCCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC PEFGGFYAARESGAFSRHGLEAEILGGGAGAPVPQMVATGKVEFGISGADELLVARARGL CCCCCEEEECCCCCHHHCCCCEEEECCCCCCCHHHHHHCCCEEECCCCHHHHHHHHHCCC DVIPLFAVYQTSPHAIMAHASRGAKNIADVLSSGTVALEPGLSYVAFLKKKYSFDKVKVV CEEEEHHEECCCCCCEEEEHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEE PYDGGVARFLADKDFAQQCFVTAEPIAAKRQGATPTVFLVAEEGFNPYLAVVITRRQYWK ECCCCHHHHHHCHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCEEEEEEECHHHHH EQPERVKSFVAAVREGWRTYLDNPGPTNAVMGKLNTTMDAETFAEGAETQKPLIETEETR CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHH ARGLGTMNRQRWEQLAQQLVELDLIEKAPAADEFLLPEFTGSRD HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC >Mature Secondary Structure SGRLLKLLGCAVLLVAAGACSRQKEEPKQGSQAATGASTAPPKADAPAKVRLALNWVPE CCHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCC PEFGGFYAARESGAFSRHGLEAEILGGGAGAPVPQMVATGKVEFGISGADELLVARARGL CCCCCEEEECCCCCHHHCCCCEEEECCCCCCCHHHHHHCCCEEECCCCHHHHHHHHHCCC DVIPLFAVYQTSPHAIMAHASRGAKNIADVLSSGTVALEPGLSYVAFLKKKYSFDKVKVV CEEEEHHEECCCCCCEEEEHHCCHHHHHHHHHCCCEEECCCHHHHHHHHHHCCCCEEEEE PYDGGVARFLADKDFAQQCFVTAEPIAAKRQGATPTVFLVAEEGFNPYLAVVITRRQYWK ECCCCHHHHHHCHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCCCCCEEEEEEECHHHHH EQPERVKSFVAAVREGWRTYLDNPGPTNAVMGKLNTTMDAETFAEGAETQKPLIETEETR CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHH ARGLGTMNRQRWEQLAQQLVELDLIEKAPAADEFLLPEFTGSRD HHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA