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The map label for this gene is ybiH [C]

Identifier: 108758943

GI number: 108758943

Start: 3346381

End: 3346980

Strand: Direct

Name: ybiH [C]

Synonym: MXAN_2869

Alternate gene names: 108758943

Gene position: 3346381-3346980 (Clockwise)

Preceding gene: 108761265

Following gene: 108757923

Centisome position: 36.61

GC content: 67.33

Gene sequence:

>600_bases
ATGGGGACCAAGGAGCAGGAGGCCCGGGAGCGCATTCTCCGGGCGACCATCGTGTGCATCGGCCGGGACGGACTGGATGC
GACGGGCATCCGGGAGATTGCCCGCGAGGCGCAGGTGAACAGCGCGGCCATCAGCTACTACTTCCGGAGCAAGGAGAAGC
TGGTCGCCCTGGCGCTGGAGCAGACGCTGGACCAGGCCTTCGGGAACGTCCTGGAGGACTTCGATCGGCTCCGGTTGGAG
GGCCTGGGCATTCGCGAGGCGTTCGAGACGCTGCTCGAGGATTTGATGAGCAACTCGCTGCGCTACCCGTACATCGCGCA
CGCGCACTTCCACGACGCGCTGGCCCATCAGCGCTACGACAGTTCCGCCATCCAGCGCTTCAATGCGTTCCTCGCCGAAC
TGGCCGGGCGGCTGGCACCGGGGGCGCCGCACCTGCCGGAGAACCGGCTGCGGATGGCGCTCACCCAGGTGTGGGCCTCC
CTGAGCCTGCTGTCGATGATGCCCCGGCTGTTCGACCAGTTCATCCTGCTCGACTTCGGCACGCTCGACACGCGGCGCGC
CTGGGTGCAGCAGGCGTCACGGCTGCTCTTCGTTCCTTGA

Upstream 100 bases:

>100_bases
AATCTCCTGGATTAATCGGTTGATTGAATCAGTAGATTTAAGGCTGCCCGCGCCTGTCAAGCGTCGGCGCGGAGTCACGT
CGTTTCAGGGGTTTGCAGGG

Downstream 100 bases:

>100_bases
GGGCCGTGTCACACGTGTCTCGTCAGAACGCCGCGCCGTCCGCGCGCAGCCCTGGAGAGCTGGCGACCCCCGGCGTCAGC
GTGTCATGCGCGACGAAGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator Tetr Family; TetR Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MGTKEQEARERILRATIVCIGRDGLDATGIREIAREAQVNSAAISYYFRSKEKLVALALEQTLDQAFGNVLEDFDRLRLE
GLGIREAFETLLEDLMSNSLRYPYIAHAHFHDALAHQRYDSSAIQRFNAFLAELAGRLAPGAPHLPENRLRMALTQVWAS
LSLLSMMPRLFDQFILLDFGTLDTRRAWVQQASRLLFVP

Sequences:

>Translated_199_residues
MGTKEQEARERILRATIVCIGRDGLDATGIREIAREAQVNSAAISYYFRSKEKLVALALEQTLDQAFGNVLEDFDRLRLE
GLGIREAFETLLEDLMSNSLRYPYIAHAHFHDALAHQRYDSSAIQRFNAFLAELAGRLAPGAPHLPENRLRMALTQVWAS
LSLLSMMPRLFDQFILLDFGTLDTRRAWVQQASRLLFVP
>Mature_198_residues
GTKEQEARERILRATIVCIGRDGLDATGIREIAREAQVNSAAISYYFRSKEKLVALALEQTLDQAFGNVLEDFDRLRLEG
LGIREAFETLLEDLMSNSLRYPYIAHAHFHDALAHQRYDSSAIQRFNAFLAELAGRLAPGAPHLPENRLRMALTQVWASL
SLLSMMPRLFDQFILLDFGTLDTRRAWVQQASRLLFVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22621; Mature: 22490

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKEQEARERILRATIVCIGRDGLDATGIREIAREAQVNSAAISYYFRSKEKLVALALE
CCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLDQAFGNVLEDFDRLRLEGLGIREAFETLLEDLMSNSLRYPYIAHAHFHDALAHQRYD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCC
SSAIQRFNAFLAELAGRLAPGAPHLPENRLRMALTQVWASLSLLSMMPRLFDQFILLDFG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLDTRRAWVQQASRLLFVP
CCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GTKEQEARERILRATIVCIGRDGLDATGIREIAREAQVNSAAISYYFRSKEKLVALALE
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QTLDQAFGNVLEDFDRLRLEGLGIREAFETLLEDLMSNSLRYPYIAHAHFHDALAHQRYD
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCC
SSAIQRFNAFLAELAGRLAPGAPHLPENRLRMALTQVWASLSLLSMMPRLFDQFILLDFG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLDTRRAWVQQASRLLFVP
CCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA