| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758921
Identifier: 108758921
GI number: 108758921
Start: 2110392
End: 2111609
Strand: Direct
Name: 108758921
Synonym: MXAN_1788
Alternate gene names: NA
Gene position: 2110392-2111609 (Clockwise)
Preceding gene: 108760489
Following gene: 108757448
Centisome position: 23.09
GC content: 69.13
Gene sequence:
>1218_bases ATGGCATATCCCTTCGAGCGGACCCTTCGTTCCCTGAACTACGAGTCGGACACGCGCCTCGTGTTCGTCGCTCTGATGGT GTTGTGTGCCGGCGGGCTCATCGCATGGTCGCTGTTCGCCAAGGTCCCGCTCGTCAAGGCCAGCTCACAGGCCCGGATCG AGCCACACAACGCCGTCCATCGCATCGAGCCGCCCAGCGCGGGCAGGGTCGTGCTCTCGCTGCTCAAACTCGACCAGGAG GTCAAGGAAGGCGACCTTCTCATCGAGTTCGACGCACGGGCCGAGCGCCTCGAGCTCGAGCGGAGCAATGCGACGCTCGC CGCGACCGAGAAGGAGCTCGCCATCATCCGCCAGCAGATCACCAACAAGCACGAAGAGGCGGCTTTGACGGCACGGGTGG ACGAGGTCGCAGTCAAGGAGGCGCTGGGGAGGGAACAGGAGCTCGCGCCCAGGCACCGGCTCGCGGTGGAACGCGCGGAG CTGGCCTTCAAGAGCCCGGCGGGCGCGGTCTCGGAGATGGAGAAGCTCGAGCGCACGACCGATGTCGACGCGCTCCGCTT CGCGCAGACGGCGCAGGGCCTGGCGCTCATCCGACTGCGGCGCGAGCAGAACGTGCGCCGTCAAGCCCTCGCCGCGCAGT TGCTGGAACTCGAGCGCGAGGCGCTGGGCGCCGAGGGGCGGATCCGGGAGCTCCAGGGGACCATCGACCGCCTTGAGTAC CAGATCGAGCGGAAGCTGTATCGGGCGCCGGCCACGGGCCACCTGGTCGACGTGGCGGAACTCGGCTCGGGAGCGTTCAT TGCCGACGGGCAGCGGGTCGGCACCATCGTCGCGAGCAATGCCGAGGTGCGGGTGCGCGCCCGTTTCCCGAAGGAGGTCG TCGGATTGATCCAGCCCGGTCAAACGGCGCGCCTCAAGCTCGACGGCTACCCGATGACCATCTACGGGACGGTCCCCGCC CGGGTGACGGCCGTCGGGACCGAGCCCGGCCAGACCGCCACGCCCGAGGCCATCCCCGGTACGGTGCGCGTCGAGCTCAA GTTCGCACCGCCGGACGATCCGCGCATCCAGCTGCGCCACGGCATGACCCTGTCGGTGGAGGTCGAGGTCGCGCGGGCGT CGCCTGTCGCGCTGCTGATGCGGGCGGTCGGCGAATGGAATCCGCAGCCTGAAGAACGGCCCACGAACGTGTTCCGGCCC GAAGCCGAGGCCCGCTGA
Upstream 100 bases:
>100_bases ATCGAGGTGCTCGTATTCAGGCAATGGGAACGTGAATCACAAAGCAGTGGCCGAGGTGTTGACAGGGCAAGACCATTAAG GCGACTTTGGTTAGCGGACC
Downstream 100 bases:
>100_bases CCATGACTCCTCCCAGGCGCCGGCGCTCAATCATTCCCGAGGTGATCCAGATCTCGGCGACGGATTGCGGCCCCGCTTCA CTCAAGAGCCTGTTCGCGGG
Product: HlyD family secretion protein
Products: NA
Alternate protein names: Secretion Protein
Number of amino acids: Translated: 405; Mature: 404
Protein sequence:
>405_residues MAYPFERTLRSLNYESDTRLVFVALMVLCAGGLIAWSLFAKVPLVKASSQARIEPHNAVHRIEPPSAGRVVLSLLKLDQE VKEGDLLIEFDARAERLELERSNATLAATEKELAIIRQQITNKHEEAALTARVDEVAVKEALGREQELAPRHRLAVERAE LAFKSPAGAVSEMEKLERTTDVDALRFAQTAQGLALIRLRREQNVRRQALAAQLLELEREALGAEGRIRELQGTIDRLEY QIERKLYRAPATGHLVDVAELGSGAFIADGQRVGTIVASNAEVRVRARFPKEVVGLIQPGQTARLKLDGYPMTIYGTVPA RVTAVGTEPGQTATPEAIPGTVRVELKFAPPDDPRIQLRHGMTLSVEVEVARASPVALLMRAVGEWNPQPEERPTNVFRP EAEAR
Sequences:
>Translated_405_residues MAYPFERTLRSLNYESDTRLVFVALMVLCAGGLIAWSLFAKVPLVKASSQARIEPHNAVHRIEPPSAGRVVLSLLKLDQE VKEGDLLIEFDARAERLELERSNATLAATEKELAIIRQQITNKHEEAALTARVDEVAVKEALGREQELAPRHRLAVERAE LAFKSPAGAVSEMEKLERTTDVDALRFAQTAQGLALIRLRREQNVRRQALAAQLLELEREALGAEGRIRELQGTIDRLEY QIERKLYRAPATGHLVDVAELGSGAFIADGQRVGTIVASNAEVRVRARFPKEVVGLIQPGQTARLKLDGYPMTIYGTVPA RVTAVGTEPGQTATPEAIPGTVRVELKFAPPDDPRIQLRHGMTLSVEVEVARASPVALLMRAVGEWNPQPEERPTNVFRP EAEAR >Mature_404_residues AYPFERTLRSLNYESDTRLVFVALMVLCAGGLIAWSLFAKVPLVKASSQARIEPHNAVHRIEPPSAGRVVLSLLKLDQEV KEGDLLIEFDARAERLELERSNATLAATEKELAIIRQQITNKHEEAALTARVDEVAVKEALGREQELAPRHRLAVERAEL AFKSPAGAVSEMEKLERTTDVDALRFAQTAQGLALIRLRREQNVRRQALAAQLLELEREALGAEGRIRELQGTIDRLEYQ IERKLYRAPATGHLVDVAELGSGAFIADGQRVGTIVASNAEVRVRARFPKEVVGLIQPGQTARLKLDGYPMTIYGTVPAR VTAVGTEPGQTATPEAIPGTVRVELKFAPPDDPRIQLRHGMTLSVEVEVARASPVALLMRAVGEWNPQPEERPTNVFRPE AEAR
Specific function: Unknown
COG id: COG1566
COG function: function code V; Multidrug resistance efflux pump
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44732; Mature: 44601
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYPFERTLRSLNYESDTRLVFVALMVLCAGGLIAWSLFAKVPLVKASSQARIEPHNAVH CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCCCCCCCCE RIEPPSAGRVVLSLLKLDQEVKEGDLLIEFDARAERLELERSNATLAATEKELAIIRQQI ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCEEEECHHHHHHHHHHH TNKHEEAALTARVDEVAVKEALGREQELAPRHRLAVERAELAFKSPAGAVSEMEKLERTT HCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC DVDALRFAQTAQGLALIRLRREQNVRRQALAAQLLELEREALGAEGRIRELQGTIDRLEY CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QIERKLYRAPATGHLVDVAELGSGAFIADGQRVGTIVASNAEVRVRARFPKEVVGLIQPG HHHHHHHCCCCCCCEEEHHHCCCCCEEECCCEEEEEEECCCEEEEEECCCHHHHHHCCCC QTARLKLDGYPMTIYGTVPARVTAVGTEPGQTATPEAIPGTVRVELKFAPPDDPRIQLRH CCEEEEECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEC GMTLSVEVEVARASPVALLMRAVGEWNPQPEERPTNVFRPEAEAR CCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AYPFERTLRSLNYESDTRLVFVALMVLCAGGLIAWSLFAKVPLVKASSQARIEPHNAVH CCCHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCEEECCCCCCCCCCCCCE RIEPPSAGRVVLSLLKLDQEVKEGDLLIEFDARAERLELERSNATLAATEKELAIIRQQI ECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCEEEECHHHHHHHHHHH TNKHEEAALTARVDEVAVKEALGREQELAPRHRLAVERAELAFKSPAGAVSEMEKLERTT HCCHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC DVDALRFAQTAQGLALIRLRREQNVRRQALAAQLLELEREALGAEGRIRELQGTIDRLEY CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH QIERKLYRAPATGHLVDVAELGSGAFIADGQRVGTIVASNAEVRVRARFPKEVVGLIQPG HHHHHHHCCCCCCCEEEHHHCCCCCEEECCCEEEEEEECCCEEEEEECCCHHHHHHCCCC QTARLKLDGYPMTIYGTVPARVTAVGTEPGQTATPEAIPGTVRVELKFAPPDDPRIQLRH CCEEEEECCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEC GMTLSVEVEVARASPVALLMRAVGEWNPQPEERPTNVFRPEAEAR CCEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA