| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758920
Identifier: 108758920
GI number: 108758920
Start: 6768784
End: 6770571
Strand: Direct
Name: 108758920
Synonym: MXAN_5440
Alternate gene names: NA
Gene position: 6768784-6770571 (Clockwise)
Preceding gene: 108764000
Following gene: 108757897
Centisome position: 74.06
GC content: 63.7
Gene sequence:
>1788_bases ATGCATGCGTTCCGCGCCGGCGTGGCGCACGCCACCCGGCGCATTTCCTGGAGTACACCTGTGCCTCAGACGCTCTTCCC TTCCTGCATGACTCGCGGATTGCGTGTCACCCTGGTGGTAGCCCCGCTCTTCATGAATGTGGTGGGCTGCGATAGCGATA GGAACGCCCTCGTCCCGATCCAGGATTCAGGGGGCAGCATCGTCCTGCCTGGCGACATTCCAACGGACGTTCAGGAGTAC CACTACGCCTTCAACCTCGGCACGCGCGAGGCGCACTCCAAGCTCAATCTCAACGTCGCGCCCCCGGGCGGGGATTGCGT CACCCTGCATGCCCCCACGGGAATCAGCGACCTCCGCTGGAACGGGGCAGCGCCCGTCGATGCCGAGCAGGATGGCGGCT CGCTCCGCATCTGTGGCCCCTCGCTTTATGCGGGACAAATCATTCTCGAAGGCCGATTCCTCGTCCCGGAGCAAACCTAC GACTTCACACCGGTAGGCTTCACCCGGACGCAAGCTCGCGACAACACGGTGTTCTCGTACCTGCTGGGCTGGGTCGAGCA GTGTGATCGTTTCGGGTTGTGCGACGACTCCCCCGCGAGCCAGGCGAGATTCGTGCTCGACGTGACCCACGCCCGCGGCG AGCTCACGCTGTGCCCGGGACAACGGACGCAGGTGAGCCAAACCCATACGCGGTGTGAGCTCTTACAGACGCCGGCGCCC ACCTACTCGGCCTTCGCCATCGCCTCGAACCCTGGTTGGAACCGCACCGAGTGGCTCAATGTCGATGGAACGAAGCTCAT CTTCTTCGAAACCCAGAGTGGGCGGCTCGCCCGGTCACTCTCCAAGCCGGAAATGACCGACTTTCTGAGGTGGGCCAAGA ATCTCCTGGGACCGCTTCCGTATGGCCAGGAGCTGCGCATCGCAGGCGCGCCGACGCATTGGCTGGGAATGGAACACCCC GCCAACATCATTCTGCGTGACACCCTGCCCGACCTCCCCAACAGGGAGTACGCAAACATGACGCGTCACGTCCTCATGCA TGAGATCATCCATCAGTGGGCGGGCAACCGCATCACCATGGCGCATGCCACGGACTTCTCCTGGAAGGAAGGCATCGCCG AGTACCTCACCTACGTCTACGAGCTGTCGAAGTGGCCTGCGGATGCCGCCAAGACACGCGCGCACTGGGATCGCCTGGCG CGCACCGCGATGTACTACCCGGGGACGTCTGACAATCCGGTGCCGTTCCTGACGTTCGCGGGAGAGACGTATGGCACCGG CTCCATGATCTTCTTCGTTCAGCTCGAGGACCTGCTGCCAGGCGGTCAGGAGACCATCGTCCGCGCCATCACGGACTTCT TGTCCGGGCCCCCCCGTGCACGCAGCGTGGCAGAGCTGCAAGGCGCGCTGGAGCAGGCCTCCGGAGAAGACCTGGGCGAC TACTTCCAGGCCTGGGTCTACGGAACGGGAGACGCCGATTGGCCCACCTTCCAGACGGATGCAGTTCGAGCCAACGGAGA GCTGAGCCTGACCGTGACGCAGTCCGCCCTGCAACCTGGGAAGCTCTACCCGGCGAAGGTGGTGATCCGGCTGAAGGGCG ACACCCAGGAGCTGGACGTGCCCATCGACTTTGGTCTGCACCCCACGACGGGCACCATCACCGTGTCCGTGCCGTTCGAG GAAGACGTCAAATCGATTGGCGTCGACCCTGAGAACCGGGTCGTGAGCTGGAACGCCAATGCCAGCCTGTCTCCCCTTGA AGCCCCCCCTCAACACTGGATCTTCTAG
Upstream 100 bases:
>100_bases TTGACGGTTCGCGAAGCGCTCGACGTCGACGGACTCTGACCCATTCCCTTCTCATCGCATGCTGTCCGCCGTCAGCGCCG CCTGACGGCGAGACGGTTGC
Downstream 100 bases:
>100_bases GCCATCCGAGGAGCCTTCATGCAAAGCAATGCTCAGCCCCACCGCAAGGCGTTTGCTGGCCGATGGGCGGCGCCCGCCGT GGCTCTCGTCATCCTTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MHAFRAGVAHATRRISWSTPVPQTLFPSCMTRGLRVTLVVAPLFMNVVGCDSDRNALVPIQDSGGSIVLPGDIPTDVQEY HYAFNLGTREAHSKLNLNVAPPGGDCVTLHAPTGISDLRWNGAAPVDAEQDGGSLRICGPSLYAGQIILEGRFLVPEQTY DFTPVGFTRTQARDNTVFSYLLGWVEQCDRFGLCDDSPASQARFVLDVTHARGELTLCPGQRTQVSQTHTRCELLQTPAP TYSAFAIASNPGWNRTEWLNVDGTKLIFFETQSGRLARSLSKPEMTDFLRWAKNLLGPLPYGQELRIAGAPTHWLGMEHP ANIILRDTLPDLPNREYANMTRHVLMHEIIHQWAGNRITMAHATDFSWKEGIAEYLTYVYELSKWPADAAKTRAHWDRLA RTAMYYPGTSDNPVPFLTFAGETYGTGSMIFFVQLEDLLPGGQETIVRAITDFLSGPPRARSVAELQGALEQASGEDLGD YFQAWVYGTGDADWPTFQTDAVRANGELSLTVTQSALQPGKLYPAKVVIRLKGDTQELDVPIDFGLHPTTGTITVSVPFE EDVKSIGVDPENRVVSWNANASLSPLEAPPQHWIF
Sequences:
>Translated_595_residues MHAFRAGVAHATRRISWSTPVPQTLFPSCMTRGLRVTLVVAPLFMNVVGCDSDRNALVPIQDSGGSIVLPGDIPTDVQEY HYAFNLGTREAHSKLNLNVAPPGGDCVTLHAPTGISDLRWNGAAPVDAEQDGGSLRICGPSLYAGQIILEGRFLVPEQTY DFTPVGFTRTQARDNTVFSYLLGWVEQCDRFGLCDDSPASQARFVLDVTHARGELTLCPGQRTQVSQTHTRCELLQTPAP TYSAFAIASNPGWNRTEWLNVDGTKLIFFETQSGRLARSLSKPEMTDFLRWAKNLLGPLPYGQELRIAGAPTHWLGMEHP ANIILRDTLPDLPNREYANMTRHVLMHEIIHQWAGNRITMAHATDFSWKEGIAEYLTYVYELSKWPADAAKTRAHWDRLA RTAMYYPGTSDNPVPFLTFAGETYGTGSMIFFVQLEDLLPGGQETIVRAITDFLSGPPRARSVAELQGALEQASGEDLGD YFQAWVYGTGDADWPTFQTDAVRANGELSLTVTQSALQPGKLYPAKVVIRLKGDTQELDVPIDFGLHPTTGTITVSVPFE EDVKSIGVDPENRVVSWNANASLSPLEAPPQHWIF >Mature_595_residues MHAFRAGVAHATRRISWSTPVPQTLFPSCMTRGLRVTLVVAPLFMNVVGCDSDRNALVPIQDSGGSIVLPGDIPTDVQEY HYAFNLGTREAHSKLNLNVAPPGGDCVTLHAPTGISDLRWNGAAPVDAEQDGGSLRICGPSLYAGQIILEGRFLVPEQTY DFTPVGFTRTQARDNTVFSYLLGWVEQCDRFGLCDDSPASQARFVLDVTHARGELTLCPGQRTQVSQTHTRCELLQTPAP TYSAFAIASNPGWNRTEWLNVDGTKLIFFETQSGRLARSLSKPEMTDFLRWAKNLLGPLPYGQELRIAGAPTHWLGMEHP ANIILRDTLPDLPNREYANMTRHVLMHEIIHQWAGNRITMAHATDFSWKEGIAEYLTYVYELSKWPADAAKTRAHWDRLA RTAMYYPGTSDNPVPFLTFAGETYGTGSMIFFVQLEDLLPGGQETIVRAITDFLSGPPRARSVAELQGALEQASGEDLGD YFQAWVYGTGDADWPTFQTDAVRANGELSLTVTQSALQPGKLYPAKVVIRLKGDTQELDVPIDFGLHPTTGTITVSVPFE EDVKSIGVDPENRVVSWNANASLSPLEAPPQHWIF
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65643; Mature: 65643
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAFRAGVAHATRRISWSTPVPQTLFPSCMTRGLRVTLVVAPLFMNVVGCDSDRNALVPI CCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCEEEEE QDSGGSIVLPGDIPTDVQEYHYAFNLGTREAHSKLNLNVAPPGGDCVTLHAPTGISDLRW ECCCCCEEECCCCCCCHHHHEEEEECCCHHCCCEEEEEECCCCCCEEEEECCCCCCCCCC NGAAPVDAEQDGGSLRICGPSLYAGQIILEGRFLVPEQTYDFTPVGFTRTQARDNTVFSY CCCCCCCCCCCCCEEEEECCCCEECEEEEECEEECCCCCCCCCCCCCEECCCCCHHHHHH LLGWVEQCDRFGLCDDSPASQARFVLDVTHARGELTLCPGQRTQVSQTHTRCELLQTPAP HHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCC TYSAFAIASNPGWNRTEWLNVDGTKLIFFETQSGRLARSLSKPEMTDFLRWAKNLLGPLP CCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCC YGQELRIAGAPTHWLGMEHPANIILRDTLPDLPNREYANMTRHVLMHEIIHQWAGNRITM CCCEEEEECCCHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE AHATDFSWKEGIAEYLTYVYELSKWPADAAKTRAHWDRLARTAMYYPGTSDNPVPFLTFA EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEC GETYGTGSMIFFVQLEDLLPGGQETIVRAITDFLSGPPRARSVAELQGALEQASGEDLGD CCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH YFQAWVYGTGDADWPTFQTDAVRANGELSLTVTQSALQPGKLYPAKVVIRLKGDTQELDV HHHEEEEECCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECE PIDFGLHPTTGTITVSVPFEEDVKSIGVDPENRVVSWNANASLSPLEAPPQHWIF EEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHCCC >Mature Secondary Structure MHAFRAGVAHATRRISWSTPVPQTLFPSCMTRGLRVTLVVAPLFMNVVGCDSDRNALVPI CCCHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCEEEEEHHHHHHHHCCCCCCCCEEEEE QDSGGSIVLPGDIPTDVQEYHYAFNLGTREAHSKLNLNVAPPGGDCVTLHAPTGISDLRW ECCCCCEEECCCCCCCHHHHEEEEECCCHHCCCEEEEEECCCCCCEEEEECCCCCCCCCC NGAAPVDAEQDGGSLRICGPSLYAGQIILEGRFLVPEQTYDFTPVGFTRTQARDNTVFSY CCCCCCCCCCCCCEEEEECCCCEECEEEEECEEECCCCCCCCCCCCCEECCCCCHHHHHH LLGWVEQCDRFGLCDDSPASQARFVLDVTHARGELTLCPGQRTQVSQTHTRCELLQTPAP HHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHCCCCC TYSAFAIASNPGWNRTEWLNVDGTKLIFFETQSGRLARSLSKPEMTDFLRWAKNLLGPLP CCEEEEEECCCCCCCCEEEECCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCC YGQELRIAGAPTHWLGMEHPANIILRDTLPDLPNREYANMTRHVLMHEIIHQWAGNRITM CCCEEEEECCCHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE AHATDFSWKEGIAEYLTYVYELSKWPADAAKTRAHWDRLARTAMYYPGTSDNPVPFLTFA EEECCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEEEEEC GETYGTGSMIFFVQLEDLLPGGQETIVRAITDFLSGPPRARSVAELQGALEQASGEDLGD CCCCCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH YFQAWVYGTGDADWPTFQTDAVRANGELSLTVTQSALQPGKLYPAKVVIRLKGDTQELDV HHHEEEEECCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCEECE PIDFGLHPTTGTITVSVPFEEDVKSIGVDPENRVVSWNANASLSPLEAPPQHWIF EEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA