| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758893
Identifier: 108758893
GI number: 108758893
Start: 5840523
End: 5841716
Strand: Reverse
Name: 108758893
Synonym: MXAN_4658
Alternate gene names: NA
Gene position: 5841716-5840523 (Counterclockwise)
Preceding gene: 108761783
Following gene: 108757567
Centisome position: 63.92
GC content: 64.32
Gene sequence:
>1194_bases ATGCGTGCCCGTCTCCAAATGCGCTCGCGCTCAAGAGGTGCCGCCACGGTCGAGTTCGCGCTCTCCGTGCCGCTCCTCGT GATGATTCTGATGTTCAGCATGTACCTCACGGAGTTGGTGAGGGCGAAGCTCAAGCTCCAGGAGGCGGCGCGCTACGCCG TCTGGGAGATGACGAGCTACGCGCTCTCCGACTTCGCGAACGGGAAGCACGATGACGCCTTCGAGGACGCCCGCCGGGAG GCGCACAAGGAGTTCGTCGAGCGCTACAAGGACATGGACTCGGTGGAGCCCAACGGCACTGGCGGCAATTTCATTGCCCG CTACACGGACGTGACGGCGACCATCTCCAACAAGGAGATCGCGCTCCTCGAGAGCGGGATGCTCAGCCGCCCGAGTACCA GCGAAGGAGGCGGCCTGGCGGGCGCCATCCTCAGCCCGTTGAACAACGGCATGGGATGGGTTTTGAACCAGTGGGGCTTC AACAACAAGGGCTGGGTCGAATCCGAAGTCGAGATGAACTACGAGAACGTCATCCTGCCGACGCGGTACCTCGACAAGAG CGGTGGCAACGGCGGCTTCTTCAAAGAGAACATGATGGGCGGGCGCGACCTGGGCAGCCTGCGGCTCAAGTCGAAGTACT CCATGTACGCCAACGGCTGGCACATGCCGGACGGCGGTGACGCCATCGTCCGTGGCCGCCGCGCCGGTCAGCACACCGGT GGTTCCCTCAGCCAGCCCCACGGCCTCTACCGCCAGGTGGACCGGATGGTGTTCCTGGGCTTCGCCTCCACGTTGGACAG CCTGGGCATCGGCGCCATCCTGGATGTGGTCGCCTCGGTGCTCCCCAACTTCCTGGGGACCTTCGTGGTGTCCCGGAACT ACGGCGTGGGCGCCTCGCAGAAGGGCGACTGCACCGGCCTTGCCCAGTATGATGCGAAGGCCAGCAGCGGCCTCCACGTC ATGCACAAGCGCAGCTTCGAGCTGACCGACCACGAACGGCCCAACTGCTTCGACACCGCGCCGTTCCGCGACGAGATGAC GTACGCGAACAGCAACTACATCAAGGTCTTCAACGCGCGTGGCGAGTTCTACATGGGGTGCAAGCGGGCCATGGCGGATG ACCCGACCGACCCGGATGCCCGCCCGGAGGCCACGGAGAATGACGAGCAAGACCTCAAGGTTCCCTGTGAGTAG
Upstream 100 bases:
>100_bases AGGGCCGGAACTCGCTGCCGAAGATTGGTGAGATGATGGACGCGCTGCCCGGACCGCTTCAGGGCATTGCCCCGAAGATC ATGACGCACTGAGGACTGCC
Downstream 100 bases:
>100_bases GGTGGTGGCCGCCCGGACGGCACTTCTGTGCGTGCTGCTGGCCTCCGTGCCAGCAGCCGCGGAGCAGGAGCTGCCCATCT ATCCGGGCACCATCCACACG
Product: pilus biogenesis protein
Products: NA
Alternate protein names: Pilus Biogenesis Protein Tade Family
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRARLQMRSRSRGAATVEFALSVPLLVMILMFSMYLTELVRAKLKLQEAARYAVWEMTSYALSDFANGKHDDAFEDARRE AHKEFVERYKDMDSVEPNGTGGNFIARYTDVTATISNKEIALLESGMLSRPSTSEGGGLAGAILSPLNNGMGWVLNQWGF NNKGWVESEVEMNYENVILPTRYLDKSGGNGGFFKENMMGGRDLGSLRLKSKYSMYANGWHMPDGGDAIVRGRRAGQHTG GSLSQPHGLYRQVDRMVFLGFASTLDSLGIGAILDVVASVLPNFLGTFVVSRNYGVGASQKGDCTGLAQYDAKASSGLHV MHKRSFELTDHERPNCFDTAPFRDEMTYANSNYIKVFNARGEFYMGCKRAMADDPTDPDARPEATENDEQDLKVPCE
Sequences:
>Translated_397_residues MRARLQMRSRSRGAATVEFALSVPLLVMILMFSMYLTELVRAKLKLQEAARYAVWEMTSYALSDFANGKHDDAFEDARRE AHKEFVERYKDMDSVEPNGTGGNFIARYTDVTATISNKEIALLESGMLSRPSTSEGGGLAGAILSPLNNGMGWVLNQWGF NNKGWVESEVEMNYENVILPTRYLDKSGGNGGFFKENMMGGRDLGSLRLKSKYSMYANGWHMPDGGDAIVRGRRAGQHTG GSLSQPHGLYRQVDRMVFLGFASTLDSLGIGAILDVVASVLPNFLGTFVVSRNYGVGASQKGDCTGLAQYDAKASSGLHV MHKRSFELTDHERPNCFDTAPFRDEMTYANSNYIKVFNARGEFYMGCKRAMADDPTDPDARPEATENDEQDLKVPCE >Mature_397_residues MRARLQMRSRSRGAATVEFALSVPLLVMILMFSMYLTELVRAKLKLQEAARYAVWEMTSYALSDFANGKHDDAFEDARRE AHKEFVERYKDMDSVEPNGTGGNFIARYTDVTATISNKEIALLESGMLSRPSTSEGGGLAGAILSPLNNGMGWVLNQWGF NNKGWVESEVEMNYENVILPTRYLDKSGGNGGFFKENMMGGRDLGSLRLKSKYSMYANGWHMPDGGDAIVRGRRAGQHTG GSLSQPHGLYRQVDRMVFLGFASTLDSLGIGAILDVVASVLPNFLGTFVVSRNYGVGASQKGDCTGLAQYDAKASSGLHV MHKRSFELTDHERPNCFDTAPFRDEMTYANSNYIKVFNARGEFYMGCKRAMADDPTDPDARPEATENDEQDLKVPCE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43932; Mature: 43932
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARLQMRSRSRGAATVEFALSVPLLVMILMFSMYLTELVRAKLKLQEAARYAVWEMTSY CCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSDFANGKHDDAFEDARREAHKEFVERYKDMDSVEPNGTGGNFIARYTDVTATISNKEI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCEE ALLESGMLSRPSTSEGGGLAGAILSPLNNGMGWVLNQWGFNNKGWVESEVEMNYENVILP EEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHCCCCCEEEC TRYLDKSGGNGGFFKENMMGGRDLGSLRLKSKYSMYANGWHMPDGGDAIVRGRRAGQHTG HHHHCCCCCCCCCCHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCCHHEECCCCCCCCC GSLSQPHGLYRQVDRMVFLGFASTLDSLGIGAILDVVASVLPNFLGTFVVSRNYGVGASQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KGDCTGLAQYDAKASSGLHVMHKRSFELTDHERPNCFDTAPFRDEMTYANSNYIKVFNAR CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECC GEFYMGCKRAMADDPTDPDARPEATENDEQDLKVPCE CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRARLQMRSRSRGAATVEFALSVPLLVMILMFSMYLTELVRAKLKLQEAARYAVWEMTSY CCCCHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALSDFANGKHDDAFEDARREAHKEFVERYKDMDSVEPNGTGGNFIARYTDVTATISNKEI HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCEE ALLESGMLSRPSTSEGGGLAGAILSPLNNGMGWVLNQWGFNNKGWVESEVEMNYENVILP EEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHCCCCCEEEC TRYLDKSGGNGGFFKENMMGGRDLGSLRLKSKYSMYANGWHMPDGGDAIVRGRRAGQHTG HHHHCCCCCCCCCCHHHCCCCCCCCCEEECCCHHHHCCCCCCCCCCCHHEECCCCCCCCC GSLSQPHGLYRQVDRMVFLGFASTLDSLGIGAILDVVASVLPNFLGTFVVSRNYGVGASQ CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KGDCTGLAQYDAKASSGLHVMHKRSFELTDHERPNCFDTAPFRDEMTYANSNYIKVFNAR CCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCEEEEEECC GEFYMGCKRAMADDPTDPDARPEATENDEQDLKVPCE CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA