| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758886
Identifier: 108758886
GI number: 108758886
Start: 300732
End: 301394
Strand: Reverse
Name: 108758886
Synonym: MXAN_0253
Alternate gene names: NA
Gene position: 301394-300732 (Counterclockwise)
Preceding gene: 108758249
Following gene: 108759805
Centisome position: 3.3
GC content: 64.25
Gene sequence:
>663_bases ATGGGCAGCAAACGGGCACTCGTCGCGTGGTTGCTTGCGCTGGTCTTCACGGGATGTGGGCACACCGCGCAAAAATCCCA GCATGCATGGGAACAAGTGCCACACGGAGAAGGCGAGTCATGTACTCGCGTGGACCGGTGTGTCACGTGGGTCTGTGCTG GAGCGACACAATGCGGCCTCTACGTCTGTGAAGACGCTGGGAGGCTGCTCGCCAAGGGCGGGGGCACCATCGCCCCGCCC GCCGCACCCGGCGCGGGGCCCCATCGGCGCTGGGGCAACGTCCAGAAACTCCCCGGCGGAAATGGGCCCGTCTTCGTCTT CGACTGGCACAACGCCCCACAGTCTGAACACCGGGCTCCGCGCCTGCCCTCGGGTCCGGACTGGGTCCGGCATCATCTCT TTCCCCAAGCGGAACACCTCGCGAAGTGGTTCGCGAGGAGCCCTCGCGCACTGAACGTGCATGACTTCACCCTTGTCATC GCGCGAGACACGCATCAGCGCATCCATAGCGGGACCCGAGGCGGAGCCTGGAACCAGGAATGGACCGACTTCGCTCGCAG GTATCCTGGCGCCTCCCAACAGCAGGTTTGGGAACATCTGGGGAAGCTGGTCCAGAAGTACGACCTGATAGGCCCCATCG TCCCCTACTACTATCTGCGCTGA
Upstream 100 bases:
>100_bases AGGAGCAGGAGCAATGCCAGAGCGTGGTGGCACCGGGGCGCTCTGCGTCACGTTTGGATAGACTGCCACGGGTGGCAAGG CACCAGCGCCGGGGGCATGA
Downstream 100 bases:
>100_bases TGACCTGCCGCTGGAGGCGCAGCACGTGAGGTTCTTCGAGGTTCTCGAGGATGAAGCCACCCGGAACACGGGCCGTATCG ACGGAGTGAGCCCCTGGTGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MGSKRALVAWLLALVFTGCGHTAQKSQHAWEQVPHGEGESCTRVDRCVTWVCAGATQCGLYVCEDAGRLLAKGGGTIAPP AAPGAGPHRRWGNVQKLPGGNGPVFVFDWHNAPQSEHRAPRLPSGPDWVRHHLFPQAEHLAKWFARSPRALNVHDFTLVI ARDTHQRIHSGTRGGAWNQEWTDFARRYPGASQQQVWEHLGKLVQKYDLIGPIVPYYYLR
Sequences:
>Translated_220_residues MGSKRALVAWLLALVFTGCGHTAQKSQHAWEQVPHGEGESCTRVDRCVTWVCAGATQCGLYVCEDAGRLLAKGGGTIAPP AAPGAGPHRRWGNVQKLPGGNGPVFVFDWHNAPQSEHRAPRLPSGPDWVRHHLFPQAEHLAKWFARSPRALNVHDFTLVI ARDTHQRIHSGTRGGAWNQEWTDFARRYPGASQQQVWEHLGKLVQKYDLIGPIVPYYYLR >Mature_219_residues GSKRALVAWLLALVFTGCGHTAQKSQHAWEQVPHGEGESCTRVDRCVTWVCAGATQCGLYVCEDAGRLLAKGGGTIAPPA APGAGPHRRWGNVQKLPGGNGPVFVFDWHNAPQSEHRAPRLPSGPDWVRHHLFPQAEHLAKWFARSPRALNVHDFTLVIA RDTHQRIHSGTRGGAWNQEWTDFARRYPGASQQQVWEHLGKLVQKYDLIGPIVPYYYLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24506; Mature: 24375
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKRALVAWLLALVFTGCGHTAQKSQHAWEQVPHGEGESCTRVDRCVTWVCAGATQCGL CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCE YVCEDAGRLLAKGGGTIAPPAAPGAGPHRRWGNVQKLPGGNGPVFVFDWHNAPQSEHRAP EEECCCCHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCHHCCCC RLPSGPDWVRHHLFPQAEHLAKWFARSPRALNVHDFTLVIARDTHQRIHSGTRGGAWNQE CCCCCHHHHHHHCCCCHHHHHHHHHCCCCEECCCEEEEEEECCHHHHHHCCCCCCCCCHH WTDFARRYPGASQQQVWEHLGKLVQKYDLIGPIVPYYYLR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GSKRALVAWLLALVFTGCGHTAQKSQHAWEQVPHGEGESCTRVDRCVTWVCAGATQCGL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCE YVCEDAGRLLAKGGGTIAPPAAPGAGPHRRWGNVQKLPGGNGPVFVFDWHNAPQSEHRAP EEECCCCHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEECCCCCCHHCCCC RLPSGPDWVRHHLFPQAEHLAKWFARSPRALNVHDFTLVIARDTHQRIHSGTRGGAWNQE CCCCCHHHHHHHCCCCHHHHHHHHHCCCCEECCCEEEEEEECCHHHHHHCCCCCCCCCHH WTDFARRYPGASQQQVWEHLGKLVQKYDLIGPIVPYYYLR HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA