| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108758874
GI number: 108758874
Start: 2836569
End: 2837870
Strand: Reverse
Name: macB [H]
Synonym: MXAN_2428
Alternate gene names: 108758874
Gene position: 2837870-2836569 (Counterclockwise)
Preceding gene: 108760326
Following gene: 108761471
Centisome position: 31.05
GC content: 66.97
Gene sequence:
>1302_bases ATGCTCCAGCTCTTCCTCATCGCATTCCGCAACCTCGGCACCCACCGCAGGCGCACCCTGCTGCTGGGCGGCGCCATCGC CAGCGTCACCGCGCTGCTCGTCATCCTCATGGGCCTGTCCACGGGCATGAAGGAGTCGATGCTCCGCTCCGCCACCACGC TGTCCACCGGCCACGTCAACGTGGCCGGGTTCTACAAGGTGACGGCGGGCCAGGCGGCGCCGGTCGTCACCGGCTATCCG GCCATCCTGGAGCAGATCCGCAAGGACGTGCCGGAGCTGGACTTCGCCGTCCAGCGCGGCCGGGGCTGGCTCAAGGTCGT CAGTGAGACGTCCTCCATTCAGGTGGGCGTGGGCGGCATCGACATCCAGTCCGAGCCCGGCCTCCGTCAGGTGCTGCAGA TTCGCGCGGGCTCGCTGGACGGCCTGGCCGAGTCCGGCACGGTGCTGCTCTTCGAGAAGCAGGCGAAGAAGCTCAACGTC CAGGTGGGCGAGTCCGTAACGCTGGCCGCCCAGACGCTGCGAGGCGCCAGCAACACGGTGGACGCGCGCGTGGTGGCCAT CGCGGCCGACATGGGCATGCTGAGCGACTTCGGCATCTTCGTGCCGTCGGACACGCTGCGCTCGCTGTACCAGTTCAAGA GCGACACCGCGGGCGCGCTGCTGCTCTACCTGAAGGACATCCAGCATGTGCCAGCGGTGCAGGCGCGGCTGCGCCAGACG CTGACGGACGCGGGCCACACGGTGATGGACCACGACCCGCGCGCGTTCTTCATGAAGTTCGAGACCGTCAACCGTGAGGC CTGGACGGGTCAGCGGCTGGACATCACGAACTGGGAGGACGAAATCTCCTTCATCACCTGGACGCTCACCGCGCTCAACA GCCTCACCGGTGTGCTCATCTTCGTGCTGATGGTCATCATCGGCGTGGGCATCATGAACACGCTGTGGATCGCCATCCGG GAGCGCACCCGGGAGATTGGCACCCTGCGCGCCATTGGCATGCAGCGCACCCGCGTGCTGCTGATGTTCGTGTTCGAGGC GCTCCTGCTGGGCATGCTGGGCACGCTGGCGGGCGCCAGCACCGGGTTGGTGCTGTGCCTGGCCGTCAATGCCATGGCCG TGCATGTCCCGGAGGTGGTGGCGGTCTTCATCATGTCGGACACCTTGAATCTGGCCGTGCACCCCTCGTCCATCCTGGGT GCCATGGCCTTCATCACCGCGTGCACCACCGCCATCTCGCTCATTCCCTCCTTCCTCGCCGCGCGGCTCAAGCCGGTGAC GGCGATGCACCACATCGGGTGA
Upstream 100 bases:
>100_bases GTGATCGTCCTGGGCGTCTCCGCCATCTCCACCCTCTATCCCGCGTTCCTCGCGACCCGGGTCTCGCCCCTCCAGGCGAT GCAGACGGACGAGTGAGAAC
Downstream 100 bases:
>100_bases CCCTATGAGCCTCAAGAACATGCTGTCCGCCGCGGCGCTGGCCGTGGCGCTGCTGTCCGCCCCGGCCGCCCTGGCCCTGG AGCAGGCCGAGCAGGTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MLQLFLIAFRNLGTHRRRTLLLGGAIASVTALLVILMGLSTGMKESMLRSATTLSTGHVNVAGFYKVTAGQAAPVVTGYP AILEQIRKDVPELDFAVQRGRGWLKVVSETSSIQVGVGGIDIQSEPGLRQVLQIRAGSLDGLAESGTVLLFEKQAKKLNV QVGESVTLAAQTLRGASNTVDARVVAIAADMGMLSDFGIFVPSDTLRSLYQFKSDTAGALLLYLKDIQHVPAVQARLRQT LTDAGHTVMDHDPRAFFMKFETVNREAWTGQRLDITNWEDEISFITWTLTALNSLTGVLIFVLMVIIGVGIMNTLWIAIR ERTREIGTLRAIGMQRTRVLLMFVFEALLLGMLGTLAGASTGLVLCLAVNAMAVHVPEVVAVFIMSDTLNLAVHPSSILG AMAFITACTTAISLIPSFLAARLKPVTAMHHIG
Sequences:
>Translated_433_residues MLQLFLIAFRNLGTHRRRTLLLGGAIASVTALLVILMGLSTGMKESMLRSATTLSTGHVNVAGFYKVTAGQAAPVVTGYP AILEQIRKDVPELDFAVQRGRGWLKVVSETSSIQVGVGGIDIQSEPGLRQVLQIRAGSLDGLAESGTVLLFEKQAKKLNV QVGESVTLAAQTLRGASNTVDARVVAIAADMGMLSDFGIFVPSDTLRSLYQFKSDTAGALLLYLKDIQHVPAVQARLRQT LTDAGHTVMDHDPRAFFMKFETVNREAWTGQRLDITNWEDEISFITWTLTALNSLTGVLIFVLMVIIGVGIMNTLWIAIR ERTREIGTLRAIGMQRTRVLLMFVFEALLLGMLGTLAGASTGLVLCLAVNAMAVHVPEVVAVFIMSDTLNLAVHPSSILG AMAFITACTTAISLIPSFLAARLKPVTAMHHIG >Mature_433_residues MLQLFLIAFRNLGTHRRRTLLLGGAIASVTALLVILMGLSTGMKESMLRSATTLSTGHVNVAGFYKVTAGQAAPVVTGYP AILEQIRKDVPELDFAVQRGRGWLKVVSETSSIQVGVGGIDIQSEPGLRQVLQIRAGSLDGLAESGTVLLFEKQAKKLNV QVGESVTLAAQTLRGASNTVDARVVAIAADMGMLSDFGIFVPSDTLRSLYQFKSDTAGALLLYLKDIQHVPAVQARLRQT LTDAGHTVMDHDPRAFFMKFETVNREAWTGQRLDITNWEDEISFITWTLTALNSLTGVLIFVLMVIIGVGIMNTLWIAIR ERTREIGTLRAIGMQRTRVLLMFVFEALLLGMLGTLAGASTGLVLCLAVNAMAVHVPEVVAVFIMSDTLNLAVHPSSILG AMAFITACTTAISLIPSFLAARLKPVTAMHHIG
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG4591
COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 46683; Mature: 46683
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQLFLIAFRNLGTHRRRTLLLGGAIASVTALLVILMGLSTGMKESMLRSATTLSTGHVN CHHHHHHHHHCCCCHHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCEE VAGFYKVTAGQAAPVVTGYPAILEQIRKDVPELDFAVQRGRGWLKVVSETSSIQVGVGGI EEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCEEEECCCE DIQSEPGLRQVLQIRAGSLDGLAESGTVLLFEKQAKKLNVQVGESVTLAAQTLRGASNTV ECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCHHEEEECCCCHHHHHHHHCCCCCCC DARVVAIAADMGMLSDFGIFVPSDTLRSLYQFKSDTAGALLLYLKDIQHVPAVQARLRQT CCEEEEEECCCCCHHHCCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHH LTDAGHTVMDHDPRAFFMKFETVNREAWTGQRLDITNWEDEISFITWTLTALNSLTGVLI HHHCCCEECCCCCCEEEEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH FVLMVIIGVGIMNTLWIAIRERTREIGTLRAIGMQRTRVLLMFVFEALLLGMLGTLAGAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TGLVLCLAVNAMAVHVPEVVAVFIMSDTLNLAVHPSSILGAMAFITACTTAISLIPSFLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH ARLKPVTAMHHIG HHHHHHHHHHCCC >Mature Secondary Structure MLQLFLIAFRNLGTHRRRTLLLGGAIASVTALLVILMGLSTGMKESMLRSATTLSTGHVN CHHHHHHHHHCCCCHHHHEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCCCEE VAGFYKVTAGQAAPVVTGYPAILEQIRKDVPELDFAVQRGRGWLKVVSETSSIQVGVGGI EEEEEEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCEEEEECCCCEEEECCCE DIQSEPGLRQVLQIRAGSLDGLAESGTVLLFEKQAKKLNVQVGESVTLAAQTLRGASNTV ECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCHHEEEECCCCHHHHHHHHCCCCCCC DARVVAIAADMGMLSDFGIFVPSDTLRSLYQFKSDTAGALLLYLKDIQHVPAVQARLRQT CCEEEEEECCCCCHHHCCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHH LTDAGHTVMDHDPRAFFMKFETVNREAWTGQRLDITNWEDEISFITWTLTALNSLTGVLI HHHCCCEECCCCCCEEEEEEEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHH FVLMVIIGVGIMNTLWIAIRERTREIGTLRAIGMQRTRVLLMFVFEALLLGMLGTLAGAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TGLVLCLAVNAMAVHVPEVVAVFIMSDTLNLAVHPSSILGAMAFITACTTAISLIPSFLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH ARLKPVTAMHHIG HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA