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The map label for this gene is trpH [H]

Identifier: 108758872

GI number: 108758872

Start: 3191422

End: 3192240

Strand: Reverse

Name: trpH [H]

Synonym: MXAN_2739

Alternate gene names: 108758872

Gene position: 3192240-3191422 (Counterclockwise)

Preceding gene: 108759559

Following gene: 108757860

Centisome position: 34.93

GC content: 71.18

Gene sequence:

>819_bases
GTGATTGACCTGCACTCGCACACCACCGCCAGCGACGGTCAATATGCTCCCACGGAGCTGCTGGCCCGCGCCGCCGCCGC
CGGGGTGACGGTGTTGGCGATTACCGACCACGACACCGTCGCGGGGTTGGCCGAGGCCGAGGTGGCGGCGCGCGCCCACG
GCGTGGAGCTGGTGCCGGGCATCGAAATCTCCGCGTTCATTCATGGACGCGAGTGCCACATCCTGGGGCACTTCCTGAGG
CCGGACGACGAGGACATCGCTCGCTTCGCCGACCGGCTCCGACTGGAGCGCGAGCAGCGCATGGAAGCCCTGCTGGAGCG
CATGCGGCAGCTCGGCTACCCCGTGCGCATGGAGCACGTCCGGGCGGTGGCCGGCGACGCGCAGTTGGGACGTCCCCACC
TGGCCCGTGTGCTGGTGGACCGCGGCTGGGTGGTGGACGTGAAGGAGGCCTTCGACCGCTTCCTGGGCATGCGCGGCGCC
GCCTGGGTGGAGCGCTTCAAGCTGACGGGCGAGGACGCCATCCGCCTCATCCGCAACGCGGGCGGCACGGCCACCCTCGC
CCACCCGGGTTCATCGCGCATGGAGCGACTGGAGATCCGCGCGCTCGCCCAGGCGGGACTGGCGGGCCTCGAGGTACTGC
ACGAGGACCACAACCCCAGCGTGCGCCAGAAGTATCTCAGCCTGGCCAAGGAGCTGGGCCTGGTCCCCACCGCTGGCAGC
GACTTCCACGGCGAGGCCATCTCCGCCGACCACCGGCTGGGCACCGCCTCCATGCCTCCCGAGCTCTTCGCCCGCCTCAA
GTCACGCGCCCAGGCCTGA

Upstream 100 bases:

>100_bases
ACATCCTGGGTGGCGGCGGCACCCCCCATGCCGCAAGTTGGTGTGAAACCCGGCATAGGTCGCGTATGGGGAACATTCCC
CCCACACCCTGGAGCCCGCC

Downstream 100 bases:

>100_bases
ACCGCCCAGGCGGGTAAAAGTGAAAAGTCCAGGAATTTGTTAGTCTCCGGGCCTCCATGGGGTGCCCGAGCGAGACGACA
CTGAGCGACTTCCTCGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIDLHSHTTASDGQYAPTELLARAAAAGVTVLAITDHDTVAGLAEAEVAARAHGVELVPGIEISAFIHGRECHILGHFLR
PDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHVRAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGMRGA
AWVERFKLTGEDAIRLIRNAGGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLSLAKELGLVPTAGS
DFHGEAISADHRLGTASMPPELFARLKSRAQA

Sequences:

>Translated_272_residues
MIDLHSHTTASDGQYAPTELLARAAAAGVTVLAITDHDTVAGLAEAEVAARAHGVELVPGIEISAFIHGRECHILGHFLR
PDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHVRAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGMRGA
AWVERFKLTGEDAIRLIRNAGGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLSLAKELGLVPTAGS
DFHGEAISADHRLGTASMPPELFARLKSRAQA
>Mature_272_residues
MIDLHSHTTASDGQYAPTELLARAAAAGVTVLAITDHDTVAGLAEAEVAARAHGVELVPGIEISAFIHGRECHILGHFLR
PDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHVRAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGMRGA
AWVERFKLTGEDAIRLIRNAGGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLSLAKELGLVPTAGS
DFHGEAISADHRLGTASMPPELFARLKSRAQA

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=249, Percent_Identity=33.7349397590361, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 29738; Mature: 29738

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLHSHTTASDGQYAPTELLARAAAAGVTVLAITDHDTVAGLAEAEVAARAHGVELVPG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCEECCC
IEISAFIHGRECHILGHFLRPDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHV
CEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGMRGAAWVERFKLTGEDAIRLIRNA
HHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHC
GGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLSLAKELGLVPTAGS
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
DFHGEAISADHRLGTASMPPELFARLKSRAQA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MIDLHSHTTASDGQYAPTELLARAAAAGVTVLAITDHDTVAGLAEAEVAARAHGVELVPG
CCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCCEECCC
IEISAFIHGRECHILGHFLRPDDEDIARFADRLRLEREQRMEALLERMRQLGYPVRMEHV
CEEEEEEECCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
RAVAGDAQLGRPHLARVLVDRGWVVDVKEAFDRFLGMRGAAWVERFKLTGEDAIRLIRNA
HHHHCCCCCCCHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHC
GGTATLAHPGSSRMERLEIRALAQAGLAGLEVLHEDHNPSVRQKYLSLAKELGLVPTAGS
CCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
DFHGEAISADHRLGTASMPPELFARLKSRAQA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]