| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758858
Identifier: 108758858
GI number: 108758858
Start: 3614038
End: 3614526
Strand: Reverse
Name: 108758858
Synonym: MXAN_3089
Alternate gene names: NA
Gene position: 3614526-3614038 (Counterclockwise)
Preceding gene: 108759402
Following gene: 108759525
Centisome position: 39.55
GC content: 67.08
Gene sequence:
>489_bases ATGAACGTTTCCATCGTCTCCCGAGATGAAATCAAGCTGGTGGGCATCAAGGTGGTCGGCCGGCGCAGCGAACTGAGCCA CCGCGTCCCGCTGGCGTGGCTGGAGCACCTCTCTCGTCTGGACGAACTGCCCGGAGTGGTCGACCGCGACGTGTTCCATG GCTGCGTGCCGGGCAGCGACCACGAGCAACCGGGCGATGACCCCGTCTACCAGTACTGGGCCACCACCGAGGTCCGAGTC CTCGACGGGGTCCCAGAAGGCCTGAAGGCCCTCACGATTCCCGCGCGCGACTACGCCATGACACCGGTGCAGGGCACGGC GGACGCCATCAACGCGGCCTACGGCCGGCTGGCGAATTGGCTTCAGTCGGAAGGCAGGCGCTCAGCCCCTGCCGCCTACG TGCTGGAGCGATACGGCCAGCGTCGACAGCCTGTGACCCCGCCGTACGAGCGCTTCGATTACGAACTGCTCACGCCCCTG GCGCCCTGA
Upstream 100 bases:
>100_bases GTCGAGTGTGCGAACGTAACCACTCGTCAGCACGGGGATGCCGCGGCGCTCGAGTTCCTTCTGAGGTTGAACCAGCTTCA AGGTGGAGGGTTCGGAAACC
Downstream 100 bases:
>100_bases GCGACTTCTCCCAGGTACCGTCAACGAGGAGCGCGGGCACCAAGCAAGCGCCCGCGTCAAACCGTGCGCACGACAACAGA AGATTGTTCGTCGGACGCGA
Product: transcription activator family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MNVSIVSRDEIKLVGIKVVGRRSELSHRVPLAWLEHLSRLDELPGVVDRDVFHGCVPGSDHEQPGDDPVYQYWATTEVRV LDGVPEGLKALTIPARDYAMTPVQGTADAINAAYGRLANWLQSEGRRSAPAAYVLERYGQRRQPVTPPYERFDYELLTPL AP
Sequences:
>Translated_162_residues MNVSIVSRDEIKLVGIKVVGRRSELSHRVPLAWLEHLSRLDELPGVVDRDVFHGCVPGSDHEQPGDDPVYQYWATTEVRV LDGVPEGLKALTIPARDYAMTPVQGTADAINAAYGRLANWLQSEGRRSAPAAYVLERYGQRRQPVTPPYERFDYELLTPL AP >Mature_162_residues MNVSIVSRDEIKLVGIKVVGRRSELSHRVPLAWLEHLSRLDELPGVVDRDVFHGCVPGSDHEQPGDDPVYQYWATTEVRV LDGVPEGLKALTIPARDYAMTPVQGTADAINAAYGRLANWLQSEGRRSAPAAYVLERYGQRRQPVTPPYERFDYELLTPL AP
Specific function: Unknown
COG id: COG3708
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18121; Mature: 18121
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVSIVSRDEIKLVGIKVVGRRSELSHRVPLAWLEHLSRLDELPGVVDRDVFHGCVPGSD CCCCCCCCCCEEEEEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCHHCHHHHHCCCCCCC HEQPGDDPVYQYWATTEVRVLDGVPEGLKALTIPARDYAMTPVQGTADAINAAYGRLANW CCCCCCCCCEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH LQSEGRRSAPAAYVLERYGQRRQPVTPPYERFDYELLTPLAP HHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCCC >Mature Secondary Structure MNVSIVSRDEIKLVGIKVVGRRSELSHRVPLAWLEHLSRLDELPGVVDRDVFHGCVPGSD CCCCCCCCCCEEEEEEEEECCHHHHCCCCCHHHHHHHHHHHHCCCHHCHHHHHCCCCCCC HEQPGDDPVYQYWATTEVRVLDGVPEGLKALTIPARDYAMTPVQGTADAINAAYGRLANW CCCCCCCCCEEEECCCEEEEECCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHH LQSEGRRSAPAAYVLERYGQRRQPVTPPYERFDYELLTPLAP HHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA