| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758803
Identifier: 108758803
GI number: 108758803
Start: 6258633
End: 6260480
Strand: Reverse
Name: 108758803
Synonym: MXAN_5009
Alternate gene names: NA
Gene position: 6260480-6258633 (Counterclockwise)
Preceding gene: 108762100
Following gene: 108761520
Centisome position: 68.5
GC content: 68.13
Gene sequence:
>1848_bases GTGCTCCTGACGCGGGGGATGCGGCGCTGCGCCACACGTCCAGTCACAACCATGGCCGGGTGGCTGCCGCGTGTAGGTTT ACGCGACAGTAGGGGGGGGCTCACGGCGCCCGCCCGCTTGCTTCCGTTCTTGTCCAGGGGCGGCCTCTCCCAGGAAACGT CGGCGGCTGCCCGCCCGCTCTCCTGGAAGGCGGCTCACACCCCGGGGCGGCTGTTCTCTCAAGTGCTCATCTTGGCTGCC GGAGGAGGGGAGGCGACACCCGTGAGCGCTGTGCTTCCACCAGCGATGCATCTATGGGCTCACAGCCTCGTGCGCCGGGT CCGGGAGAAGGTGCCACCCGCGCCGGGACGCAGGGCGAGGAAGCTGCTCCTCGTCCACCTGGATGGCGTCCCCAAGAGCC TGCTGGATGAAGCGCTCGTCGCGGGGCGCATGCCCTTTCTATCGCGGCTCGTCCGCTCGGGGGCCTTCCATCTGGACGAG GCCTTTTGGGGAGCGCCCACGTCAACGCCTTTCTTCCAGGCAGGCCTGCTCTACGGCATGCGCCATTCCAACCTGCCGGC CTACTCGTGGTTCGACCGTGAGCTGGGCCGCAAGGTCCAGATGAACACCCCGGCGGATGCGCTGGCCATCGATCAGCGCC TGCGCGGTGCGGGCCGCACCAGTCTGCTCGAGGGTGGGGGCCACGGGTATTTCTCCCTGTTCCGAGCGGGAGCAGAGAAC GCGCTGAGCATGAGCACGCTGGCCAGCTTCGAGCAGATGTCGCGCGCGTTCTCCTACGAGATGCTGGGGTTGCTCACCGC GCGCACTCGCGGCATCTGGGACTACCTGCGCTCGCTGGGCATGGACACCTGGGCCGCAGCGCGCGAAGTCGCCCACTGGG CTCGTGCGCTTCACGATTGGCGCCACGAGCCGGCCTTCCTCTTCAGCCACGTCTTCCTCCAGCGGCTGGGTTGGAGCTTC GCCTTCACCAAGTCCTTGGTGGACATGGCGCGGGGTGTCCCCGTCATCTATCTGGTCTACGGCAACTATGATGAGGTGGC CCACCGCCGGGGGCCGCGCTCCGAACAGGCTCGCGCCGAGCTGCACCGCGTGGATTCGTACCTCGCGGAGCTATACGCTG TGGCGGGCGCGGTGGAGCAGCCCTACGACGTCGTCTTCCTCTCCGACCACGGACACGTGGACTGTCTGCCCTGGGAGCAG CGGAAGGGCCAGCCCCTGGCGCAGTGGTTGACGGCGCCCCACGGTGACGGACCTCTCTCCGACGACGCAGTCCGCGGACT ATGCGACGGGAGGGCTCACCCGGAGCTGGACACCCAGCCTCGAGCGCCATTCACGCCCGTGGCCATCGACTGCGGCAACT TCGCCCATGTGTACCTGTCTGGTGAGTCCAAGCCGCTGGAAGCCATGGCCCTGCTCGAGCGCCACCCCGAGGTACTGGCC CGGGTGACGCGGAGTCCAGACATTGGCCTTGTCACACTGAGACGAGGCAACAGCGCGGTCGCGCTCGTGCGCGACGGCGT CTACACCGTGGACACGCTGGACCGTGCCCCACTGTCCGCCGAATTCAGCAAGCGCGCGGTGGCAGACTTCCTCCGCGTAC TCCCGACCATGTCCACCGCGGGCGACCTGGTCCTCTTCGGCGAAGCCGTGCAGCGCGGTGGCACCGTGGGCTTCGCCTGG GAGTTCGGCTCGCACGGAGGACTGACTCGCACGGAGGCCAACAGCCTGGTGTGCTGGCCCGCGAAGGCGCCCGTGGACCT GTCCGGCCTTTCTCACTGCGTACAGCTCCATGAGCGGCTCGCGGCGGTCTTTCTCGACAACACCCCACGACTCCGGTTGG TGCCGTGA
Upstream 100 bases:
>100_bases CGCCGTGGACATCAACAACGATGACCGAGCCGACCTCATCGGTTTTGGCGACCTGGGTGAGTACGTGAAGCTGCGCTGAG CCAGATGATCCGCGTGCTTC
Downstream 100 bases:
>100_bases AGGGGAGGGCGAGGCACGCCGGAGGCCGGGCGCTGCTCAAGGCGCTGCTCGCCGTCTTCGGGCTCGTGCTGTCCGTCGTC CTGCTGTCCACTGCCTTCTT
Product: type I phosphodiesterase/nucleotide pyrophosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase
Number of amino acids: Translated: 615; Mature: 615
Protein sequence:
>615_residues MLLTRGMRRCATRPVTTMAGWLPRVGLRDSRGGLTAPARLLPFLSRGGLSQETSAAARPLSWKAAHTPGRLFSQVLILAA GGGEATPVSAVLPPAMHLWAHSLVRRVREKVPPAPGRRARKLLLVHLDGVPKSLLDEALVAGRMPFLSRLVRSGAFHLDE AFWGAPTSTPFFQAGLLYGMRHSNLPAYSWFDRELGRKVQMNTPADALAIDQRLRGAGRTSLLEGGGHGYFSLFRAGAEN ALSMSTLASFEQMSRAFSYEMLGLLTARTRGIWDYLRSLGMDTWAAAREVAHWARALHDWRHEPAFLFSHVFLQRLGWSF AFTKSLVDMARGVPVIYLVYGNYDEVAHRRGPRSEQARAELHRVDSYLAELYAVAGAVEQPYDVVFLSDHGHVDCLPWEQ RKGQPLAQWLTAPHGDGPLSDDAVRGLCDGRAHPELDTQPRAPFTPVAIDCGNFAHVYLSGESKPLEAMALLERHPEVLA RVTRSPDIGLVTLRRGNSAVALVRDGVYTVDTLDRAPLSAEFSKRAVADFLRVLPTMSTAGDLVLFGEAVQRGGTVGFAW EFGSHGGLTRTEANSLVCWPAKAPVDLSGLSHCVQLHERLAAVFLDNTPRLRLVP
Sequences:
>Translated_615_residues MLLTRGMRRCATRPVTTMAGWLPRVGLRDSRGGLTAPARLLPFLSRGGLSQETSAAARPLSWKAAHTPGRLFSQVLILAA GGGEATPVSAVLPPAMHLWAHSLVRRVREKVPPAPGRRARKLLLVHLDGVPKSLLDEALVAGRMPFLSRLVRSGAFHLDE AFWGAPTSTPFFQAGLLYGMRHSNLPAYSWFDRELGRKVQMNTPADALAIDQRLRGAGRTSLLEGGGHGYFSLFRAGAEN ALSMSTLASFEQMSRAFSYEMLGLLTARTRGIWDYLRSLGMDTWAAAREVAHWARALHDWRHEPAFLFSHVFLQRLGWSF AFTKSLVDMARGVPVIYLVYGNYDEVAHRRGPRSEQARAELHRVDSYLAELYAVAGAVEQPYDVVFLSDHGHVDCLPWEQ RKGQPLAQWLTAPHGDGPLSDDAVRGLCDGRAHPELDTQPRAPFTPVAIDCGNFAHVYLSGESKPLEAMALLERHPEVLA RVTRSPDIGLVTLRRGNSAVALVRDGVYTVDTLDRAPLSAEFSKRAVADFLRVLPTMSTAGDLVLFGEAVQRGGTVGFAW EFGSHGGLTRTEANSLVCWPAKAPVDLSGLSHCVQLHERLAAVFLDNTPRLRLVP >Mature_615_residues MLLTRGMRRCATRPVTTMAGWLPRVGLRDSRGGLTAPARLLPFLSRGGLSQETSAAARPLSWKAAHTPGRLFSQVLILAA GGGEATPVSAVLPPAMHLWAHSLVRRVREKVPPAPGRRARKLLLVHLDGVPKSLLDEALVAGRMPFLSRLVRSGAFHLDE AFWGAPTSTPFFQAGLLYGMRHSNLPAYSWFDRELGRKVQMNTPADALAIDQRLRGAGRTSLLEGGGHGYFSLFRAGAEN ALSMSTLASFEQMSRAFSYEMLGLLTARTRGIWDYLRSLGMDTWAAAREVAHWARALHDWRHEPAFLFSHVFLQRLGWSF AFTKSLVDMARGVPVIYLVYGNYDEVAHRRGPRSEQARAELHRVDSYLAELYAVAGAVEQPYDVVFLSDHGHVDCLPWEQ RKGQPLAQWLTAPHGDGPLSDDAVRGLCDGRAHPELDTQPRAPFTPVAIDCGNFAHVYLSGESKPLEAMALLERHPEVLA RVTRSPDIGLVTLRRGNSAVALVRDGVYTVDTLDRAPLSAEFSKRAVADFLRVLPTMSTAGDLVLFGEAVQRGGTVGFAW EFGSHGGLTRTEANSLVCWPAKAPVDLSGLSHCVQLHERLAAVFLDNTPRLRLVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67495; Mature: 67495
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLTRGMRRCATRPVTTMAGWLPRVGLRDSRGGLTAPARLLPFLSRGGLSQETSAAARPL CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCC SWKAAHTPGRLFSQVLILAAGGGEATPVSAVLPPAMHLWAHSLVRRVREKVPPAPGRRAR CCCCCCCHHHHHHHHHEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHC KLLLVHLDGVPKSLLDEALVAGRMPFLSRLVRSGAFHLDEAFWGAPTSTPFFQAGLLYGM EEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHH RHSNLPAYSWFDRELGRKVQMNTPADALAIDQRLRGAGRTSLLEGGGHGYFSLFRAGAEN HCCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCH ALSMSTLASFEQMSRAFSYEMLGLLTARTRGIWDYLRSLGMDTWAAAREVAHWARALHDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RHEPAFLFSHVFLQRLGWSFAFTKSLVDMARGVPVIYLVYGNYDEVAHRRGPRSEQARAE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCHHHHHH LHRVDSYLAELYAVAGAVEQPYDVVFLSDHGHVDCLPWEQRKGQPLAQWLTAPHGDGPLS HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHCCCHHHHHHCCCCCCCCCC DDAVRGLCDGRAHPELDTQPRAPFTPVAIDCGNFAHVYLSGESKPLEAMALLERHPEVLA HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCHHHHH RVTRSPDIGLVTLRRGNSAVALVRDGVYTVDTLDRAPLSAEFSKRAVADFLRVLPTMSTA HHHCCCCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC GDLVLFGEAVQRGGTVGFAWEFGSHGGLTRTEANSLVCWPAKAPVDLSGLSHCVQLHERL CCEEEEHHHHHCCCCEEEEEECCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHH AAVFLDNTPRLRLVP HHHHCCCCCCEEECC >Mature Secondary Structure MLLTRGMRRCATRPVTTMAGWLPRVGLRDSRGGLTAPARLLPFLSRGGLSQETSAAARPL CCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCC SWKAAHTPGRLFSQVLILAAGGGEATPVSAVLPPAMHLWAHSLVRRVREKVPPAPGRRAR CCCCCCCHHHHHHHHHEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHC KLLLVHLDGVPKSLLDEALVAGRMPFLSRLVRSGAFHLDEAFWGAPTSTPFFQAGLLYGM EEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHCCCCCCCHHHHHHHHHHH RHSNLPAYSWFDRELGRKVQMNTPADALAIDQRLRGAGRTSLLEGGGHGYFSLFRAGAEN HCCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCH ALSMSTLASFEQMSRAFSYEMLGLLTARTRGIWDYLRSLGMDTWAAAREVAHWARALHDW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH RHEPAFLFSHVFLQRLGWSFAFTKSLVDMARGVPVIYLVYGNYDEVAHRRGPRSEQARAE CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCCCCCHHHHHH LHRVDSYLAELYAVAGAVEQPYDVVFLSDHGHVDCLPWEQRKGQPLAQWLTAPHGDGPLS HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCCHHHCCCHHHHHHCCCCCCCCCC DDAVRGLCDGRAHPELDTQPRAPFTPVAIDCGNFAHVYLSGESKPLEAMALLERHPEVLA HHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCCHHHHHHHHHCHHHHH RVTRSPDIGLVTLRRGNSAVALVRDGVYTVDTLDRAPLSAEFSKRAVADFLRVLPTMSTA HHHCCCCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC GDLVLFGEAVQRGGTVGFAWEFGSHGGLTRTEANSLVCWPAKAPVDLSGLSHCVQLHERL CCEEEEHHHHHCCCCEEEEEECCCCCCCCEECCCCEEEECCCCCCCHHHHHHHHHHHHHH AAVFLDNTPRLRLVP HHHHCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA