| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
Click here to switch to the map view.
The map label for this gene is folD
Identifier: 108758766
GI number: 108758766
Start: 3559312
End: 3560178
Strand: Direct
Name: folD
Synonym: MXAN_3032
Alternate gene names: 108758766
Gene position: 3559312-3560178 (Clockwise)
Preceding gene: 108759184
Following gene: 108760493
Centisome position: 38.94
GC content: 68.74
Gene sequence:
>867_bases GTGAACGCCCAGTTGATTGATGGCAAGGCAGTTGCGGCGCGCGTGCGAGCGGAGGTCAAGGCGGAGGTCGACCGGCTCAA GCTCGAGCATGGCCTGACGCCGGGGCTGGCCGTGGTGCGCGTGGGGGAGGACCCCGCCTCCAAGGTCTACGTCAATGGGA AGAAGAAGGCCGCGGAGGAGGTGGGCTTCCGCTCCTGGGAGCTCCACCCGGACGAGGGCATCACCCAGGCGGCGCTGCTG GAGGTCATCCACCAGCTCAACGCGGACCCGGCGGTGCACGGCATCCTGGTTCAGTTGCCGTTGCCCAGGCACATCGACCC GGACGTCATCATCTCCGCCGTGAAGCCGGAGAAGGACGTGGACGGCTTCCACCCGCTCAACGCCGGCAACCTGCTGCTGG GCCGGTCCACCACCCGGGCGTGTACGCCCTACGGGGTGATGCGGCTGCTGGAGGAGATTGGCTGCGACCCCGCGGGCAAG CGGGCGGTGGTGGTGGGGCGCAGCAACATCGTGGGCAAGCCCATGGCGCTGATGCTGCTCCAGAAGAACGCCACGGTGAC CATCTGCCACAGCAAGAGCGACCTGCGCCGGGAAGTGGAGGGCGCGGACATCCTGGTGGTGGCGGTGGGGGCGGCCGAGC TGGTGAAGGGCGCGTGGATAAAGCCCGGCGCGGTGGTGATTGACGTGGGGATGAATCGCAAGCCGGACGGCAAGCTCGTG GGCGACGTGGAATTCGCCGCTGCCGCCGAGCGCGCGTCATTCATCACCCCCGTGCCCGGTGGCGTGGGGCCCATGACCAT CGCCATGCTGATGCGCAACACGCTCGACGCGGCCGTCCGCTACGGCCTGGTGCCTGTCGTCAGGTAG
Upstream 100 bases:
>100_bases CCCGCCATCAACCCCAGCATTGCTCCCAGAACTGTTCCTGCGCCCATGGCCGACGTTCCGCTCCCTTTCCGGCGGGGGAG TTTCGCATAGAGTGGCACGG
Downstream 100 bases:
>100_bases GCCGTGAGGGTGACGCGCTGGGGCCCCGGTCCCAGCTCCGCCTGCGCGTACTCGTGCATGGACCAGAGCAGCGGCTCCCA CTGCGGGCCCAGCGCCCTGC
Product: methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNAQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEEVGFRSWELHPDEGITQAALL EVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLLGRSTTRACTPYGVMRLLEEIGCDPAGK RAVVVGRSNIVGKPMALMLLQKNATVTICHSKSDLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMNRKPDGKLV GDVEFAAAAERASFITPVPGGVGPMTIAMLMRNTLDAAVRYGLVPVVR
Sequences:
>Translated_288_residues MNAQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEEVGFRSWELHPDEGITQAALL EVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLLGRSTTRACTPYGVMRLLEEIGCDPAGK RAVVVGRSNIVGKPMALMLLQKNATVTICHSKSDLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMNRKPDGKLV GDVEFAAAAERASFITPVPGGVGPMTIAMLMRNTLDAAVRYGLVPVVR >Mature_288_residues MNAQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEEVGFRSWELHPDEGITQAALL EVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDVDGFHPLNAGNLLLGRSTTRACTPYGVMRLLEEIGCDPAGK RAVVVGRSNIVGKPMALMLLQKNATVTICHSKSDLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMNRKPDGKLV GDVEFAAAAERASFITPVPGGVGPMTIAMLMRNTLDAAVRYGLVPVVR
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=291, Percent_Identity=50.1718213058419, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=43.1506849315069, Blast_Score=211, Evalue=5e-55, Organism=Homo sapiens, GI94721354, Length=292, Percent_Identity=44.1780821917808, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI36796743, Length=206, Percent_Identity=28.1553398058252, Blast_Score=79, Evalue=5e-15, Organism=Escherichia coli, GI1786741, Length=283, Percent_Identity=53.356890459364, Blast_Score=280, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17568735, Length=295, Percent_Identity=43.3898305084746, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321643, Length=298, Percent_Identity=47.986577181208, Blast_Score=249, Evalue=4e-67, Organism=Saccharomyces cerevisiae, GI6319558, Length=288, Percent_Identity=47.5694444444444, Blast_Score=243, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6322933, Length=311, Percent_Identity=27.6527331189711, Blast_Score=91, Evalue=3e-19, Organism=Drosophila melanogaster, GI24645718, Length=290, Percent_Identity=50, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI17137370, Length=290, Percent_Identity=50, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI62472483, Length=290, Percent_Identity=50, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI45551871, Length=290, Percent_Identity=50, Blast_Score=256, Evalue=1e-68, Organism=Drosophila melanogaster, GI17136816, Length=292, Percent_Identity=48.2876712328767, Blast_Score=231, Evalue=5e-61, Organism=Drosophila melanogaster, GI17136818, Length=292, Percent_Identity=48.2876712328767, Blast_Score=230, Evalue=8e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD2_MYXXD (Q1D7Y2)
Other databases:
- EMBL: CP000113 - RefSeq: YP_631241.1 - ProteinModelPortal: Q1D7Y2 - SMR: Q1D7Y2 - STRING: Q1D7Y2 - GeneID: 4101285 - GenomeReviews: CP000113_GR - KEGG: mxa:MXAN_3032 - TIGR: MXAN_3032 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: DVVYETA - PhylomeDB: Q1D7Y2 - BioCyc: MXAN246197:MXAN_3032-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30599; Mature: 30599
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEE CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHHHH VGFRSWELHPDEGITQAALLEVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDV CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHEEEECCCCCCC DGFHPLNAGNLLLGRSTTRACTPYGVMRLLEEIGCDPAGKRAVVVGRSNIVGKPMALMLL CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEE QKNATVTICHSKSDLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMNRKPDGKLV ECCCEEEEEECHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCEEEEECCCCCCCCCCEE GDVEFAAAAERASFITPVPGGVGPMTIAMLMRNTLDAAVRYGLVPVVR ECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNAQLIDGKAVAARVRAEVKAEVDRLKLEHGLTPGLAVVRVGEDPASKVYVNGKKKAAEE CCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCHHHHHH VGFRSWELHPDEGITQAALLEVIHQLNADPAVHGILVQLPLPRHIDPDVIISAVKPEKDV CCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHEEEECCCCCCC DGFHPLNAGNLLLGRSTTRACTPYGVMRLLEEIGCDPAGKRAVVVGRSNIVGKPMALMLL CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEE QKNATVTICHSKSDLRREVEGADILVVAVGAAELVKGAWIKPGAVVIDVGMNRKPDGKLV ECCCEEEEEECHHHHHHHCCCCCEEEEEECHHHHHHCCCCCCCEEEEECCCCCCCCCCEE GDVEFAAAAERASFITPVPGGVGPMTIAMLMRNTLDAAVRYGLVPVVR ECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA