| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758737
Identifier: 108758737
GI number: 108758737
Start: 2869522
End: 2870328
Strand: Reverse
Name: 108758737
Synonym: MXAN_2467
Alternate gene names: NA
Gene position: 2870328-2869522 (Counterclockwise)
Preceding gene: 108758083
Following gene: 108757611
Centisome position: 31.4
GC content: 69.76
Gene sequence:
>807_bases GTGTCGGTGACGACCGCCACCGACACCCTGCTGGACGGCACCCACACGGTGCTCACCCCCGAGTACGTGGAGTTCCGCTT CACGCTCGCGGGTCTGTACTCGCGCTTCCTGGCGTGGCTGCTGGACGCCGTCATCGTCACGCTGCTCACCGGCACCATCC TGACGACGCTCAGCCTGGTGATGTTCGCCTTCCCGGGCTTCGCCAGCGCGCTGTCCATCGTCATCTACTTCCTGGTGGAC TGGGGCTACGCGATAACGCTGGAGACGGTGTGGAGCGGACGCACCGTGGGCAAGCGGGTGATGTCGCTGCGGGTCATCCA GGAGAGCGGCGTGCGCATCGGCTTCTACCACGCGGCGCTGCGCAACCTGGCGCGTCCGGTGGACCGGCTGCCCCTGTTCT ACCTGGTGGGAGGGCTCACCGCGCTCGTGTCCGGCTCCCAGCAGCGGCTGGGGGACATGCTGGCGGGAACGCTGGTGGTG CGCGAGCGGCGCCTGAAGGTGCCCTCCGCCCTGGGCATGCCCGGCGACGAAGGGCTGCTGGCGGATCCGCTCTTCGTGTC GCGCGTGAAGCGCCTGTCCAGCGAGGAGCGGGAAGTGGTGCTGACAGCGGCCCTGCGCCGTGAGGAACTGCGCATGGAGG CGCGGCTCCGCCTGTTCGCGGCACTGGGAGCAAGGCTGCAGGACGCGCTGGCCATGGAGAAGCCGCCCCACCTCTCCGAC GAGAAGTGGGCGCTGCTGGTGGCCGCGGCCCTGCTACCGCCGAAGGGGCAGCCTAGAAGTACGCCGCAGCGCCGGCAGAC AGCGTGA
Upstream 100 bases:
>100_bases TCGGACACCCTCCCCCGCCTTCCGCCGCCCTCACTGAAATCGTTGGAGCCGCGATGAATATGCCTCGAGCCGCCCGCACG TGCGCCGCCGCGGCTAGACT
Downstream 100 bases:
>100_bases GCGTGCGCTGCGTCTTCTCGTTGAGCGCGATGTAGAAGTTGTACTGCGCGCGCGCGCCCACGCTCACCGAGTCCGACATG AAGAAGTCGATGCCGACGTT
Product: RDD domain-containing protein
Products: NA
Alternate protein names: RDD Domain-Containing Protein; Integral Membrane Protein; RDD Family Protein; Transmembrane Protein; RDD Family Domain-Containing Protein; Rdd Family Protein; RDD Domain Protein; Rdd Domain Protein
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSVTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLLDAVIVTLLTGTILTTLSLVMFAFPGFASALSIVIYFLVD WGYAITLETVWSGRTVGKRVMSLRVIQESGVRIGFYHAALRNLARPVDRLPLFYLVGGLTALVSGSQQRLGDMLAGTLVV RERRLKVPSALGMPGDEGLLADPLFVSRVKRLSSEEREVVLTAALRREELRMEARLRLFAALGARLQDALAMEKPPHLSD EKWALLVAAALLPPKGQPRSTPQRRQTA
Sequences:
>Translated_268_residues MSVTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLLDAVIVTLLTGTILTTLSLVMFAFPGFASALSIVIYFLVD WGYAITLETVWSGRTVGKRVMSLRVIQESGVRIGFYHAALRNLARPVDRLPLFYLVGGLTALVSGSQQRLGDMLAGTLVV RERRLKVPSALGMPGDEGLLADPLFVSRVKRLSSEEREVVLTAALRREELRMEARLRLFAALGARLQDALAMEKPPHLSD EKWALLVAAALLPPKGQPRSTPQRRQTA >Mature_267_residues SVTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLLDAVIVTLLTGTILTTLSLVMFAFPGFASALSIVIYFLVDW GYAITLETVWSGRTVGKRVMSLRVIQESGVRIGFYHAALRNLARPVDRLPLFYLVGGLTALVSGSQQRLGDMLAGTLVVR ERRLKVPSALGMPGDEGLLADPLFVSRVKRLSSEEREVVLTAALRREELRMEARLRLFAALGARLQDALAMEKPPHLSDE KWALLVAAALLPPKGQPRSTPQRRQTA
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29564; Mature: 29433
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLLDAVIVTLLTGTILTTLSLV CCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAFPGFASALSIVIYFLVDWGYAITLETVWSGRTVGKRVMSLRVIQESGVRIGFYHAAL HHHCCCHHHHHHHHHHHHHHCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHH RNLARPVDRLPLFYLVGGLTALVSGSQQRLGDMLAGTLVVRERRLKVPSALGMPGDEGLL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC ADPLFVSRVKRLSSEEREVVLTAALRREELRMEARLRLFAALGARLQDALAMEKPPHLSD CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKWALLVAAALLPPKGQPRSTPQRRQTA CHHHHHHHHHHCCCCCCCCCCCHHCCCC >Mature Secondary Structure SVTTATDTLLDGTHTVLTPEYVEFRFTLAGLYSRFLAWLLDAVIVTLLTGTILTTLSLV CCCCHHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MFAFPGFASALSIVIYFLVDWGYAITLETVWSGRTVGKRVMSLRVIQESGVRIGFYHAAL HHHCCCHHHHHHHHHHHHHHCCEEEEEEEHHCCHHHHHHHHHHHHHHHCCCEEEHHHHHH RNLARPVDRLPLFYLVGGLTALVSGSQQRLGDMLAGTLVVRERRLKVPSALGMPGDEGLL HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC ADPLFVSRVKRLSSEEREVVLTAALRREELRMEARLRLFAALGARLQDALAMEKPPHLSD CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC EKWALLVAAALLPPKGQPRSTPQRRQTA CHHHHHHHHHHCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA