| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is yhaZ [H]
Identifier: 108758689
GI number: 108758689
Start: 291528
End: 292637
Strand: Reverse
Name: yhaZ [H]
Synonym: MXAN_0244
Alternate gene names: 108758689
Gene position: 292637-291528 (Counterclockwise)
Preceding gene: 108762672
Following gene: 108762051
Centisome position: 3.2
GC content: 69.28
Gene sequence:
>1110_bases ATGGCGGACCACCTCAAGACCTTCTTCGACGCGCGGCTTGTCGAACGCCTCGGCGCGTCACTCCACGCCGCGGCGCCGAC CTTCCCTCGCGCCGCGTTCATCCGAGAGGCCGAGAAGGGCCTGGATGGCCATGAGTTGATGGACCGGGCGCGTCATATCG CTGGTGCGCTGCACCGTGCGCTGCCCCAAGACTACCCAGAGGCGGTGGAGGTGCTGCTGCGCTCGCTCGGCCCCCGGACG GAGGCCACGGAGGGAGGGGCCATGGCTTCCTTCTTCTATCTGCCGCACACGATTTTCGTGGCGGAGCATGGCCTGGAGCA CTTCGAGCCGTCCATGCGCGCCCAGCACGTGCTCACCCAGCGATTCACCGCGGAGTTCTCCATCCGGCCCTACCTGGAGC GGCACACCGCGAAGACGCTGGCCCGCCTGCGCGAGTGGACAGAGGACCCGAGCGAGCATGTCCGGCGGCTCGTGTCAGAG GGCACGCGCACGCGCCTGCCGTGGGCCTCACGGCTGCGCGAGTTCCAGAAGGACCCCACACCGGTGCTCGCGCTGCTGGA GCGGCTGAAGGACGACCCGGCGCTTTATGTGCGCCGCTCGGTGGCCAACAACCTGAATGACATCGGCAAGGACCACCCTG CCCTGCTGGTGCAGGTTGCGACGGCGTGGATGAAGAACGCCACGCCGGAGCGGGAGTGGCTGGTGCGCCATGCGCTGCGC TCGTCCATCAAGCGCGGAGAGCCCGCGGCGCTGGCGGTGGTGGGCGCGCGGCCGCCGTCAGGCATCGAGGCCCGCGTGAC GCAGTTGCCCCGCCGCGCGGCACTGGGCAGCACGGTGGAGGTCCACTTCGAGGTGACCAACCGCTCGAAGCAGCAGCAGA CGCTGGTGGTGGACCTCGCGGTGCATTTCCAGAAGGCGAACGGCGAGGCGCGGCCCAAGGTGTTCAAGGTGCGCGAGCTG CTGCTTGGCCCGGGACAAGCGGAGACGGTGAGCAAGCGCGTCTCCTTCGCGCAGCTCTCCACACGCAAGCACTACGCCGG GCCGCACCGCTTCGAGGCCCTGGTGAACGGACAGGGGTTGCCGCTGGGTGTCGTCGAGGTCAGCGGGTAG
Upstream 100 bases:
>100_bases GCTGCCCAGTCCACCGTTGTCCAGCCGCCTGCCCACCGCGGCCCCCTGGCACGCACATGGTGCTGGTGCTCTGGCGAGCC CATGCCAGATTGCGCGCCCC
Downstream 100 bases:
>100_bases GAAGTTCCTGGCAGGCGATTCCCTCCAGCCCGAGGCGCCTCATCGCATCCACGAACCGGTCGGTCCCGATGATCATCGTC GCGAAGTTCACGAGCCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MADHLKTFFDARLVERLGASLHAAAPTFPRAAFIREAEKGLDGHELMDRARHIAGALHRALPQDYPEAVEVLLRSLGPRT EATEGGAMASFFYLPHTIFVAEHGLEHFEPSMRAQHVLTQRFTAEFSIRPYLERHTAKTLARLREWTEDPSEHVRRLVSE GTRTRLPWASRLREFQKDPTPVLALLERLKDDPALYVRRSVANNLNDIGKDHPALLVQVATAWMKNATPEREWLVRHALR SSIKRGEPAALAVVGARPPSGIEARVTQLPRRAALGSTVEVHFEVTNRSKQQQTLVVDLAVHFQKANGEARPKVFKVREL LLGPGQAETVSKRVSFAQLSTRKHYAGPHRFEALVNGQGLPLGVVEVSG
Sequences:
>Translated_369_residues MADHLKTFFDARLVERLGASLHAAAPTFPRAAFIREAEKGLDGHELMDRARHIAGALHRALPQDYPEAVEVLLRSLGPRT EATEGGAMASFFYLPHTIFVAEHGLEHFEPSMRAQHVLTQRFTAEFSIRPYLERHTAKTLARLREWTEDPSEHVRRLVSE GTRTRLPWASRLREFQKDPTPVLALLERLKDDPALYVRRSVANNLNDIGKDHPALLVQVATAWMKNATPEREWLVRHALR SSIKRGEPAALAVVGARPPSGIEARVTQLPRRAALGSTVEVHFEVTNRSKQQQTLVVDLAVHFQKANGEARPKVFKVREL LLGPGQAETVSKRVSFAQLSTRKHYAGPHRFEALVNGQGLPLGVVEVSG >Mature_368_residues ADHLKTFFDARLVERLGASLHAAAPTFPRAAFIREAEKGLDGHELMDRARHIAGALHRALPQDYPEAVEVLLRSLGPRTE ATEGGAMASFFYLPHTIFVAEHGLEHFEPSMRAQHVLTQRFTAEFSIRPYLERHTAKTLARLREWTEDPSEHVRRLVSEG TRTRLPWASRLREFQKDPTPVLALLERLKDDPALYVRRSVANNLNDIGKDHPALLVQVATAWMKNATPEREWLVRHALRS SIKRGEPAALAVVGARPPSGIEARVTQLPRRAALGSTVEVHFEVTNRSKQQQTLVVDLAVHFQKANGEARPKVFKVRELL LGPGQAETVSKRVSFAQLSTRKHYAGPHRFEALVNGQGLPLGVVEVSG
Specific function: Unknown
COG id: COG4335
COG function: function code L; DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HEAT repeat [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011989 - InterPro: IPR016024 - InterPro: IPR000357 - InterPro: IPR021133 [H]
Pfam domain/function: PF02985 HEAT [H]
EC number: NA
Molecular weight: Translated: 41267; Mature: 41136
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHLKTFFDARLVERLGASLHAAAPTFPRAAFIREAEKGLDGHELMDRARHIAGALHRA CCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LPQDYPEAVEVLLRSLGPRTEATEGGAMASFFYLPHTIFVAEHGLEHFEPSMRAQHVLTQ CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHH RFTAEFSIRPYLERHTAKTLARLREWTEDPSEHVRRLVSEGTRTRLPWASRLREFQKDPT HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC PVLALLERLKDDPALYVRRSVANNLNDIGKDHPALLVQVATAWMKNATPEREWLVRHALR HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH SSIKRGEPAALAVVGARPPSGIEARVTQLPRRAALGSTVEVHFEVTNRSKQQQTLVVDLA HHHCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHCCCEEEEEEEECCCCCHHHHHHHHHH VHFQKANGEARPKVFKVRELLLGPGQAETVSKRVSFAQLSTRKHYAGPHRFEALVNGQGL HHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC PLGVVEVSG CEEEEEECC >Mature Secondary Structure ADHLKTFFDARLVERLGASLHAAAPTFPRAAFIREAEKGLDGHELMDRARHIAGALHRA CHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH LPQDYPEAVEVLLRSLGPRTEATEGGAMASFFYLPHTIFVAEHGLEHFEPSMRAQHVLTQ CCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHCCHHHHHHHHHHH RFTAEFSIRPYLERHTAKTLARLREWTEDPSEHVRRLVSEGTRTRLPWASRLREFQKDPT HHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC PVLALLERLKDDPALYVRRSVANNLNDIGKDHPALLVQVATAWMKNATPEREWLVRHALR HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH SSIKRGEPAALAVVGARPPSGIEARVTQLPRRAALGSTVEVHFEVTNRSKQQQTLVVDLA HHHCCCCCCEEEEEECCCCCCHHHHHHHCCHHHHCCCEEEEEEEECCCCCHHHHHHHHHH VHFQKANGEARPKVFKVRELLLGPGQAETVSKRVSFAQLSTRKHYAGPHRFEALVNGQGL HHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC PLGVVEVSG CEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]