| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758669
Identifier: 108758669
GI number: 108758669
Start: 2615565
End: 2617337
Strand: Reverse
Name: 108758669
Synonym: MXAN_2259
Alternate gene names: NA
Gene position: 2617337-2615565 (Counterclockwise)
Preceding gene: 108761037
Following gene: 108760346
Centisome position: 28.64
GC content: 70.73
Gene sequence:
>1773_bases ATGCGCCCGCCAAGCATCACTTCAAGTAGGCAACGCGCCATGTCACCCCGTGGGCAGTGCGTCGGCGCGTCCCCAGGTTG GGGAAAGAGCACATCCCCGCGGAGGTCCCCCATGCGTGCTCCCCTGCCCTATGTCTTGATGTTGGCCATGGCGGTCGCCG GCACGTCCGCCGCTGCGGCGGAGCACTCGGCCCCGACCCTGGATTCCCTGGCAGACGGCGCGTTGCTGCTCGACGGGCTG GGGACGCACGAACGCCAGGTCACCACGGCCTCCCCCCAGGCCCAGGCCTTCTTCAACCAGGGCCTGCGGCTGGCGTATGG CTTCAACCACGACGAGGCCGCACGCTCGTTCGCCCGAGCCGCGCAGTTGGACCCCACCTGCGCCATGTGTTTCTGGGGCG TCGCGCTGGTGCTGGGTCCCAACTACAACATGCCCATGCTGGCGGAGAGTGCGCCCGCCGCCTGGGACGCCCTCCAGCGC GCGCGGCAGCTCGCACCCCGTACGACGCCGGTGGAGCAGGCGCTCATCACCGCGCTCGTCCAGCGCTACCCCGGCCCGAA TGCCCTGCCACCGGAGAAGATGGCCCCCTTCAACGAGGCCTATGCCAGCGCCATGGCGGACGTGGCCGCGCGCTACCCGG AGGACCTGGACGTGCAGACGCTCCATGCCGAGGCCCTCATGGACCGGAATCCCTGGAAGCTGTGGTCGCTGGACGGGGCG CCGGCTCCGGGCACGGAGCAGATTGTCGCCACGCTGGAGTCCGTGCTCACCCGGGCCCCCTACCACCTGGGCGCGAACCA CTATTACATCCACGCGGTGGAGGCCTCGCCGAACCCGGAGAAGGCGGAGCCTTCCGCGGACCGGCTGGGCGCTCTGGCGC CGAAGGCGGGGCACATCGTCCACATGCCGGCCCACATCTACCAGCGCGTGGGCCGCTACGCGGATGCATCGGAAAGCAAT CGGAAGGCGGCGGCGGCGGACCTGGCCTACCAGAAGCAGGCGAAGCCGCGCGGCCACGTCTACCCCATGTACACGTCCCA CAACTTCGGCTTCCTGGCGTACTCCGCGTCCATGGAGGGGCGGAAGCAGGAGACGTTGGAGGCAGCCCGGGCCTCGGCGA AACACTTCCCGCCGGAGCTGCTCACGATGATGCCGGGCATGGACTTCTTCGTGGCCCAGCCGCTGTTCGCCATGGTGCGC TTCGGGGACTGGGAGGGCCTCCTCGCCGAGCCCCGCCCGAACCCGAAGTACCCCGTCCAGACGGGCCTCTGGCTCCACGC GCACGGCATGGCGCTGGCGGCCACGGGGCAACTGCCACAAGCCCGCGCGGAGCTGGCCGAGCTGCGACAACTGGCCCGCA CCGTGCCTCCGACCCTGGCCGCGAACCTCAACACCGCGAAAGACGTGCTGGGCGTCGCGGTGCGCGTGTTGGAGGCCCGC GTGGCCCAGGCCGAAGGCCGGCCCCAGGCCCTGACGCTGTGGCGGGAAGCCGTCGACGCCGCGGACCGGCTCTCCTACGC CGAGCCCGCGGACTGGTTCTATCCGGTGCGCCACTACCAGGGCGCCGCGCTGCTGGAGGCCGGGCGCAATCAGGAAGCGG AGGCCGTCTACCGCGAGGACCTGCGGCGCAACCCGAAGAATGGCTGGGGCCTGTTTGGCTTGACGCAGTCGCTCGAAGCG CAGGGACGCCATGAGGAGGCGGCTCGCACCCGCTCCGCTTTCGAGAAGGCCTGGGCGCGCGCGGACTTTCCGCTCACGAC GACCGCGCCCTGA
Upstream 100 bases:
>100_bases GTCTTGAGCGGACGCTCGCGCTGCTGCAGTGAGATTCCGCCGGGCGGGAATCTACTACGGCGCGGGCTCGTTCCCAACCC TCATCCGCACGCGGAAAGTG
Downstream 100 bases:
>100_bases TGACAAGGGACACCCCCTGACACCCCGCCGCACCCGGAACGAGGCCCGGGTTGCACGAGGCTCCGCATGGGGATAGGGAA GCAGGCCTCGTATGTCTGCG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Protein; Tetratricopeptide Domain Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Family; TPR Repeat Protein; Redoxin Domain-Containing Protein; Tetratricopeptide Region; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MRPPSITSSRQRAMSPRGQCVGASPGWGKSTSPRRSPMRAPLPYVLMLAMAVAGTSAAAAEHSAPTLDSLADGALLLDGL GTHERQVTTASPQAQAFFNQGLRLAYGFNHDEAARSFARAAQLDPTCAMCFWGVALVLGPNYNMPMLAESAPAAWDALQR ARQLAPRTTPVEQALITALVQRYPGPNALPPEKMAPFNEAYASAMADVAARYPEDLDVQTLHAEALMDRNPWKLWSLDGA PAPGTEQIVATLESVLTRAPYHLGANHYYIHAVEASPNPEKAEPSADRLGALAPKAGHIVHMPAHIYQRVGRYADASESN RKAAAADLAYQKQAKPRGHVYPMYTSHNFGFLAYSASMEGRKQETLEAARASAKHFPPELLTMMPGMDFFVAQPLFAMVR FGDWEGLLAEPRPNPKYPVQTGLWLHAHGMALAATGQLPQARAELAELRQLARTVPPTLAANLNTAKDVLGVAVRVLEAR VAQAEGRPQALTLWREAVDAADRLSYAEPADWFYPVRHYQGAALLEAGRNQEAEAVYREDLRRNPKNGWGLFGLTQSLEA QGRHEEAARTRSAFEKAWARADFPLTTTAP
Sequences:
>Translated_590_residues MRPPSITSSRQRAMSPRGQCVGASPGWGKSTSPRRSPMRAPLPYVLMLAMAVAGTSAAAAEHSAPTLDSLADGALLLDGL GTHERQVTTASPQAQAFFNQGLRLAYGFNHDEAARSFARAAQLDPTCAMCFWGVALVLGPNYNMPMLAESAPAAWDALQR ARQLAPRTTPVEQALITALVQRYPGPNALPPEKMAPFNEAYASAMADVAARYPEDLDVQTLHAEALMDRNPWKLWSLDGA PAPGTEQIVATLESVLTRAPYHLGANHYYIHAVEASPNPEKAEPSADRLGALAPKAGHIVHMPAHIYQRVGRYADASESN RKAAAADLAYQKQAKPRGHVYPMYTSHNFGFLAYSASMEGRKQETLEAARASAKHFPPELLTMMPGMDFFVAQPLFAMVR FGDWEGLLAEPRPNPKYPVQTGLWLHAHGMALAATGQLPQARAELAELRQLARTVPPTLAANLNTAKDVLGVAVRVLEAR VAQAEGRPQALTLWREAVDAADRLSYAEPADWFYPVRHYQGAALLEAGRNQEAEAVYREDLRRNPKNGWGLFGLTQSLEA QGRHEEAARTRSAFEKAWARADFPLTTTAP >Mature_590_residues MRPPSITSSRQRAMSPRGQCVGASPGWGKSTSPRRSPMRAPLPYVLMLAMAVAGTSAAAAEHSAPTLDSLADGALLLDGL GTHERQVTTASPQAQAFFNQGLRLAYGFNHDEAARSFARAAQLDPTCAMCFWGVALVLGPNYNMPMLAESAPAAWDALQR ARQLAPRTTPVEQALITALVQRYPGPNALPPEKMAPFNEAYASAMADVAARYPEDLDVQTLHAEALMDRNPWKLWSLDGA PAPGTEQIVATLESVLTRAPYHLGANHYYIHAVEASPNPEKAEPSADRLGALAPKAGHIVHMPAHIYQRVGRYADASESN RKAAAADLAYQKQAKPRGHVYPMYTSHNFGFLAYSASMEGRKQETLEAARASAKHFPPELLTMMPGMDFFVAQPLFAMVR FGDWEGLLAEPRPNPKYPVQTGLWLHAHGMALAATGQLPQARAELAELRQLARTVPPTLAANLNTAKDVLGVAVRVLEAR VAQAEGRPQALTLWREAVDAADRLSYAEPADWFYPVRHYQGAALLEAGRNQEAEAVYREDLRRNPKNGWGLFGLTQSLEA QGRHEEAARTRSAFEKAWARADFPLTTTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64227; Mature: 64227
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPSITSSRQRAMSPRGQCVGASPGWGKSTSPRRSPMRAPLPYVLMLAMAVAGTSAAAA CCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH EHSAPTLDSLADGALLLDGLGTHERQVTTASPQAQAFFNQGLRLAYGFNHDEAARSFARA HCCCCCHHHHCCCCEEECCCCCCCCEEECCCCHHHHHHHCCCEEEECCCHHHHHHHHHHH AQLDPTCAMCFWGVALVLGPNYNMPMLAESAPAAWDALQRARQLAPRTTPVEQALITALV HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH QRYPGPNALPPEKMAPFNEAYASAMADVAARYPEDLDVQTLHAEALMDRNPWKLWSLDGA HHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCC PAPGTEQIVATLESVLTRAPYHLGANHYYIHAVEASPNPEKAEPSADRLGALAPKAGHIV CCCCHHHHHHHHHHHHHHCCHHCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCEE HMPAHIYQRVGRYADASESNRKAAAADLAYQKQAKPRGHVYPMYTSHNFGFLAYSASMEG ECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCC RKQETLEAARASAKHFPPELLTMMPGMDFFVAQPLFAMVRFGDWEGLLAEPRPNPKYPVQ HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TGLWLHAHGMALAATGQLPQARAELAELRQLARTVPPTLAANLNTAKDVLGVAVRVLEAR CCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH VAQAEGRPQALTLWREAVDAADRLSYAEPADWFYPVRHYQGAALLEAGRNQEAEAVYRED HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH LRRNPKNGWGLFGLTQSLEAQGRHEEAARTRSAFEKAWARADFPLTTTAP HHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRPPSITSSRQRAMSPRGQCVGASPGWGKSTSPRRSPMRAPLPYVLMLAMAVAGTSAAAA CCCCCCCCHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHH EHSAPTLDSLADGALLLDGLGTHERQVTTASPQAQAFFNQGLRLAYGFNHDEAARSFARA HCCCCCHHHHCCCCEEECCCCCCCCEEECCCCHHHHHHHCCCEEEECCCHHHHHHHHHHH AQLDPTCAMCFWGVALVLGPNYNMPMLAESAPAAWDALQRARQLAPRTTPVEQALITALV HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH QRYPGPNALPPEKMAPFNEAYASAMADVAARYPEDLDVQTLHAEALMDRNPWKLWSLDGA HHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCC PAPGTEQIVATLESVLTRAPYHLGANHYYIHAVEASPNPEKAEPSADRLGALAPKAGHIV CCCCHHHHHHHHHHHHHHCCHHCCCCEEEEEEEECCCCCCCCCCCHHHHHCCCCCCCCEE HMPAHIYQRVGRYADASESNRKAAAADLAYQKQAKPRGHVYPMYTSHNFGFLAYSASMEG ECHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCC RKQETLEAARASAKHFPPELLTMMPGMDFFVAQPLFAMVRFGDWEGLLAEPRPNPKYPVQ HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC TGLWLHAHGMALAATGQLPQARAELAELRQLARTVPPTLAANLNTAKDVLGVAVRVLEAR CCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHH VAQAEGRPQALTLWREAVDAADRLSYAEPADWFYPVRHYQGAALLEAGRNQEAEAVYRED HHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHCCCCCHHHHHHHHH LRRNPKNGWGLFGLTQSLEAQGRHEEAARTRSAFEKAWARADFPLTTTAP HHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA