| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758652
Identifier: 108758652
GI number: 108758652
Start: 7046242
End: 7047498
Strand: Reverse
Name: 108758652
Synonym: MXAN_5683
Alternate gene names: NA
Gene position: 7047498-7046242 (Counterclockwise)
Preceding gene: 108756888
Following gene: 108759870
Centisome position: 77.11
GC content: 69.21
Gene sequence:
>1257_bases ATGTCCATCCACTCCCGCAGCCCGGTCCGCCTGAGCGGGTGGGGCGCGCTCGCGCTCGCGAGCGTGCTCCTCCTGTCGTC GGGCTGCGCGGGTGACTATGTCGCGCGCACCCGGGGCGTGCGGTCCGCATACCAGCAAGGGGACTATTCGCGCGCGCTGT CCTCGTTGGAGGCCGCGGCGAAGGAAGGGCCCGAACAGGACCGCCTGCTGGTGTTGATGGACAAGGGCATGGTGCTGCAC GCCGCCGGGCAGTGGGCGGAGAGCAACGCCGTGCTCGAGGAGGCGGAGCGGCTCAGCGAGCAGATCGACAGTGTCTCCGT CAGCGAGGAGGCGAAGACGCTCGTCACCAACGAGCGTCAGCGCACCTACCGGGGGGAGGACTTCGAGAAGCTGATGATTT CCGTCCTCCAGGCGCTCAACTACGCGGAGCTGGGCGACGACGAAGCCGCCATGGTGGAGGTCCGCCAGGTCAACGAGCGC CTGGAGAAGATGATCGCCGAGGAGAAGAAGCCCTACGAGCAGCTCGCGATTGCCCGCTACCTGGGCGGCGTCATCCGGGA GGACCAGCGGGACTGGGACTCGGCCTACATCGACTACGCGAAGGCCTATGAAATCGCGCCCCGCGAGGACGCGCTGGCCG AGCCCCTGCTGCGGCTGGCGAAGAAGGTGGGCCGCGACGACATGTACGCGGAGCTGCTGGCGAAGTACCCGGACGTCCCG CACGCGCCGCTGGCGCCGGACGAAGGGCAGCTCGTCGTCGTGGTGGAGGCGGGCCTGTCTCCCGAGAAGCAGCGCGGCTC CAGGGACCCGGGCGGCGGTGGCGACCTGATTGAAGTCCCCACCTACCGGAACCGGGGGCTCGCGCCGCCCGTGAGTGTCG CCCTGGAGGGCCAGTCCCAGCAGGCAGTGACGGTGACGTCCCTGGCGGACGTGGCCGTGGTCCACCTGAATGACCGGATT GGCCGCATGCTGGCGAAGCAGCTCGCGGGCGTGGCCGTGAAGGCGGGCGTGGCGGCGGGCGTGGGCGCGCTGACGAAGAG TGATGAACTGGGCGTGCTGACCTTCCTCGTTCTCAACGCGATGAATGCGCCAGACCTGCGTTCCTGGCTCTCCCTGCCTG CGGAGTTCCAGGTGGCGCGCTTCCGCGTGCCCGCGGGGAATCACACCGTGCGTGTGACGAGCTGGGGGCAGGTGACGGAG CATCCGGTGGAGGTGAAACCGGGCCGGGTGGAGTTGTTGGTGCTCCGGCGCTACTGA
Upstream 100 bases:
>100_bases CAGCAACGTGCGGACCGGCCTCATCGAATGGACGGACGAGAAGCAGATCCGCAAGAAGTTCGAGAAGCGCGGCGTGAGCT GGTAACGGGCGCATCCTTCC
Downstream 100 bases:
>100_bases TTTGGTTTTTTGATGTAGGGTGCGCGCCCCATGTCGCCGGTCCTGGCCACGGTGGCCCTGTATTCCCTCATCATCGTCCT CGGCGCGCTGGCTGGCGCCG
Product: putative lipoprotein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Adenine DNA Methylase; Lipoprotein; Tetratricopeptide Repeat-Containing Protein
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MSIHSRSPVRLSGWGALALASVLLLSSGCAGDYVARTRGVRSAYQQGDYSRALSSLEAAAKEGPEQDRLLVLMDKGMVLH AAGQWAESNAVLEEAERLSEQIDSVSVSEEAKTLVTNERQRTYRGEDFEKLMISVLQALNYAELGDDEAAMVEVRQVNER LEKMIAEEKKPYEQLAIARYLGGVIREDQRDWDSAYIDYAKAYEIAPREDALAEPLLRLAKKVGRDDMYAELLAKYPDVP HAPLAPDEGQLVVVVEAGLSPEKQRGSRDPGGGGDLIEVPTYRNRGLAPPVSVALEGQSQQAVTVTSLADVAVVHLNDRI GRMLAKQLAGVAVKAGVAAGVGALTKSDELGVLTFLVLNAMNAPDLRSWLSLPAEFQVARFRVPAGNHTVRVTSWGQVTE HPVEVKPGRVELLVLRRY
Sequences:
>Translated_418_residues MSIHSRSPVRLSGWGALALASVLLLSSGCAGDYVARTRGVRSAYQQGDYSRALSSLEAAAKEGPEQDRLLVLMDKGMVLH AAGQWAESNAVLEEAERLSEQIDSVSVSEEAKTLVTNERQRTYRGEDFEKLMISVLQALNYAELGDDEAAMVEVRQVNER LEKMIAEEKKPYEQLAIARYLGGVIREDQRDWDSAYIDYAKAYEIAPREDALAEPLLRLAKKVGRDDMYAELLAKYPDVP HAPLAPDEGQLVVVVEAGLSPEKQRGSRDPGGGGDLIEVPTYRNRGLAPPVSVALEGQSQQAVTVTSLADVAVVHLNDRI GRMLAKQLAGVAVKAGVAAGVGALTKSDELGVLTFLVLNAMNAPDLRSWLSLPAEFQVARFRVPAGNHTVRVTSWGQVTE HPVEVKPGRVELLVLRRY >Mature_417_residues SIHSRSPVRLSGWGALALASVLLLSSGCAGDYVARTRGVRSAYQQGDYSRALSSLEAAAKEGPEQDRLLVLMDKGMVLHA AGQWAESNAVLEEAERLSEQIDSVSVSEEAKTLVTNERQRTYRGEDFEKLMISVLQALNYAELGDDEAAMVEVRQVNERL EKMIAEEKKPYEQLAIARYLGGVIREDQRDWDSAYIDYAKAYEIAPREDALAEPLLRLAKKVGRDDMYAELLAKYPDVPH APLAPDEGQLVVVVEAGLSPEKQRGSRDPGGGGDLIEVPTYRNRGLAPPVSVALEGQSQQAVTVTSLADVAVVHLNDRIG RMLAKQLAGVAVKAGVAAGVGALTKSDELGVLTFLVLNAMNAPDLRSWLSLPAEFQVARFRVPAGNHTVRVTSWGQVTEH PVEVKPGRVELLVLRRY
Specific function: Unknown
COG id: COG3014
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45576; Mature: 45445
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIHSRSPVRLSGWGALALASVLLLSSGCAGDYVARTRGVRSAYQQGDYSRALSSLEAAA CCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KEGPEQDRLLVLMDKGMVLHAAGQWAESNAVLEEAERLSEQIDSVSVSEEAKTLVTNERQ HCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH RTYRGEDFEKLMISVLQALNYAELGDDEAAMVEVRQVNERLEKMIAEEKKPYEQLAIARY HHCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LGGVIREDQRDWDSAYIDYAKAYEIAPREDALAEPLLRLAKKVGRDDMYAELLAKYPDVP HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC HAPLAPDEGQLVVVVEAGLSPEKQRGSRDPGGGGDLIEVPTYRNRGLAPPVSVALEGQSQ CCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCC QAVTVTSLADVAVVHLNDRIGRMLAKQLAGVAVKAGVAAGVGALTKSDELGVLTFLVLNA CEEEEEEHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC MNAPDLRSWLSLPAEFQVARFRVPAGNHTVRVTSWGQVTEHPVEVKPGRVELLVLRRY CCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEECCCCEEEEEEECC >Mature Secondary Structure SIHSRSPVRLSGWGALALASVLLLSSGCAGDYVARTRGVRSAYQQGDYSRALSSLEAAA CCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH KEGPEQDRLLVLMDKGMVLHAAGQWAESNAVLEEAERLSEQIDSVSVSEEAKTLVTNERQ HCCCCCCCEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH RTYRGEDFEKLMISVLQALNYAELGDDEAAMVEVRQVNERLEKMIAEEKKPYEQLAIARY HHCCCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LGGVIREDQRDWDSAYIDYAKAYEIAPREDALAEPLLRLAKKVGRDDMYAELLAKYPDVP HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCC HAPLAPDEGQLVVVVEAGLSPEKQRGSRDPGGGGDLIEVPTYRNRGLAPPVSVALEGQSQ CCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCEEEECCCCC QAVTVTSLADVAVVHLNDRIGRMLAKQLAGVAVKAGVAAGVGALTKSDELGVLTFLVLNA CEEEEEEHHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC MNAPDLRSWLSLPAEFQVARFRVPAGNHTVRVTSWGQVTEHPVEVKPGRVELLVLRRY CCCCHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCEECCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA