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The map label for this gene is rutD [H]

Identifier: 108758644

GI number: 108758644

Start: 6240440

End: 6241312

Strand: Reverse

Name: rutD [H]

Synonym: MXAN_4989

Alternate gene names: 108758644

Gene position: 6241312-6240440 (Counterclockwise)

Preceding gene: 108759208

Following gene: 108759910

Centisome position: 68.29

GC content: 68.27

Gene sequence:

>873_bases
ATGTCCGAGCGCATCATCGAATCGGGCGACATTCGGCTCTGTACCGAGGGCTTCGGGCGTGAGGGCGACGCCCCCGTGCT
GATGTTGATGGGGGCGGCCAGCTCGATGCTGGGGTGGCCTGATGGGCTCATGGAGCAGCTCGCGAGGGCGGGGCGCTTCG
TCATCCGCTACGACCACCGCGACACGGGGCGCTCCTCGCACGGTGTGCCAGGAGCCACGCCCTACACGCTGGACGACCTC
GCCGCCGATGTCATCTCCGTGCTGGATGGATACGGCATCGAGCGCGCGCACCTCGTGGGGATGTCATTGGGGGGCCTGCT
CTGCCAGCTCGTGGCGTTGAAGTACCCGGAGCGCGTCCTCTCGCTGACGCTCATCAGCGCCCAGATTTTCTCGGAGCCTG
ATTTCGAGGACCCGGGTATGGACCCGGCGGTGCTCGCGCACTTCCAGCGGGCCGCCACGCTGAACTGGTCCGACGAGGCC
GAGGCCATCGGTTTCCAGGTCGAACTCTCACGGTTGTGCGTGGGCCGTGCGCGAAGGTCGTTCGACGAGGCTCGGGTGCG
GGCGCGAGCAGTACAGGACTACCGGCGCGCGCTCGCGCCTCAATGCGCGTTGAACCACGCGGGGCTGTCCGGTGGCCTGG
AGTGGTACGGCCGGACGCGTGAGATTGAAGCGCCGCTGCTGGTCATCCACGGCTCGGTGGACCCGGTCATCGACCATGCG
CATGGCGTGGCCTTGAGCCGTGCCGTCAAGGGCGCGTGCCTGGTGACACTGCACGACGCGGGGCATGACCTGCACCCGGA
TGACTGGGAGACGATGACCCGGGCCATCACCGCCCATACCTCGGCGGCGAGTCCGCCTCACGGCGCTCGCTGA

Upstream 100 bases:

>100_bases
CTTGGAGGGGCAACCAAGATGTGTGGGTTGAATATAACCGACGCGTCGGTTATTAATTCGTCATCCGCGCCAGTTCCTGG
CTGTCGAAAGGGGTTCCTGG

Downstream 100 bases:

>100_bases
TCTGTCACAGTACGGGCATGGGGCCCTTGTTCGCCTACAGCCTCGTGCCTGTCCTCTCCGTGTCGCTGCTGCTGTTCTTC
ACGGCCGTGCTTCGGGGGCA

Product: alpha/beta fold family hydrolase

Products: alcohol; carboxylate

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSERIIESGDIRLCTEGFGREGDAPVLMLMGAASSMLGWPDGLMEQLARAGRFVIRYDHRDTGRSSHGVPGATPYTLDDL
AADVISVLDGYGIERAHLVGMSLGGLLCQLVALKYPERVLSLTLISAQIFSEPDFEDPGMDPAVLAHFQRAATLNWSDEA
EAIGFQVELSRLCVGRARRSFDEARVRARAVQDYRRALAPQCALNHAGLSGGLEWYGRTREIEAPLLVIHGSVDPVIDHA
HGVALSRAVKGACLVTLHDAGHDLHPDDWETMTRAITAHTSAASPPHGAR

Sequences:

>Translated_290_residues
MSERIIESGDIRLCTEGFGREGDAPVLMLMGAASSMLGWPDGLMEQLARAGRFVIRYDHRDTGRSSHGVPGATPYTLDDL
AADVISVLDGYGIERAHLVGMSLGGLLCQLVALKYPERVLSLTLISAQIFSEPDFEDPGMDPAVLAHFQRAATLNWSDEA
EAIGFQVELSRLCVGRARRSFDEARVRARAVQDYRRALAPQCALNHAGLSGGLEWYGRTREIEAPLLVIHGSVDPVIDHA
HGVALSRAVKGACLVTLHDAGHDLHPDDWETMTRAITAHTSAASPPHGAR
>Mature_289_residues
SERIIESGDIRLCTEGFGREGDAPVLMLMGAASSMLGWPDGLMEQLARAGRFVIRYDHRDTGRSSHGVPGATPYTLDDLA
ADVISVLDGYGIERAHLVGMSLGGLLCQLVALKYPERVLSLTLISAQIFSEPDFEDPGMDPAVLAHFQRAATLNWSDEAE
AIGFQVELSRLCVGRARRSFDEARVRARAVQDYRRALAPQCALNHAGLSGGLEWYGRTREIEAPLLVIHGSVDPVIDHAH
GVALSRAVKGACLVTLHDAGHDLHPDDWETMTRAITAHTSAASPPHGAR

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: 3.1.1.1

Molecular weight: Translated: 31378; Mature: 31247

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERIIESGDIRLCTEGFGREGDAPVLMLMGAASSMLGWPDGLMEQLARAGRFVIRYDHR
CCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHCCCEEEEECCC
DTGRSSHGVPGATPYTLDDLAADVISVLDGYGIERAHLVGMSLGGLLCQLVALKYPERVL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH
SLTLISAQIFSEPDFEDPGMDPAVLAHFQRAATLNWSDEAEAIGFQVELSRLCVGRARRS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FDEARVRARAVQDYRRALAPQCALNHAGLSGGLEWYGRTREIEAPLLVIHGSVDPVIDHA
HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHCCCCEECCCCEEEEECCCCHHHHHH
HGVALSRAVKGACLVTLHDAGHDLHPDDWETMTRAITAHTSAASPPHGAR
HHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SERIIESGDIRLCTEGFGREGDAPVLMLMGAASSMLGWPDGLMEQLARAGRFVIRYDHR
CCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHCCCEEEEECCC
DTGRSSHGVPGATPYTLDDLAADVISVLDGYGIERAHLVGMSLGGLLCQLVALKYPERVL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHH
SLTLISAQIFSEPDFEDPGMDPAVLAHFQRAATLNWSDEAEAIGFQVELSRLCVGRARRS
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
FDEARVRARAVQDYRRALAPQCALNHAGLSGGLEWYGRTREIEAPLLVIHGSVDPVIDHA
HHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHCCCCEECCCCEEEEECCCCHHHHHH
HGVALSRAVKGACLVTLHDAGHDLHPDDWETMTRAITAHTSAASPPHGAR
HHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: carboxylic ester; H2O

Specific reaction: A carboxylic ester + H2O = an alcohol + a carboxylate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA