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The map label for this gene is ygbF [C]

Identifier: 108758617

GI number: 108758617

Start: 6423212

End: 6424183

Strand: Reverse

Name: ygbF [C]

Synonym: MXAN_5143

Alternate gene names: 108758617

Gene position: 6424183-6423212 (Counterclockwise)

Preceding gene: 108758057

Following gene: 108761862

Centisome position: 70.29

GC content: 66.05

Gene sequence:

>972_bases
ATGCTGCCGAGCGGCTGGAGTTTTCCATCCAGAAGCGGTGACCGGCCAGCCGGGCAGGCGTTGGCGGGAGCCCCAACTGG
ACGAGAGAAGTCCGGACGGGCAGGGCGTTTGCGCCTAAGATGGCGCCCGATGCGAAGCTTGGCGCTGATATCCCTGCTGG
CCCTCCCTGGTTGCTTCTATCCCGCTGACCGCGGCCGCGCCCTCGAGGCGAAGGTCGACCGGCTCGGCACCGACTCCGCC
CAGATTCAGGCGGAGCTGAAGGAGACGCGCGAGCAGCTCGTCGCCACCCTTCCGAAAATCGACGAGAAGGTCGCGGAGGT
CACCAAGGCCCTCAAGGGGCTGGACACCGCGGCGCGCCGCAAGGACGCGGACATCGGCGTGCAGTTCCAGAAGACCGTCG
AAGACCTCGCCCAGCTTCGTGGCCAGGTGGAGACGTACCTCCACAAAATCACCGAGCTGGAGACGGCGCTGGCCGCGCAG
GACCAGAAGCTGGTCGCCATGCAGGGCGAGGCGGCGCTGAAGGAAGCCGAGGCGAAGAAGAAGGCCGAGGAGCTCAAGCG
CCCCACGGACAAGAAGGAGTTCCTGGCGCTCGCCAAAGCGAAGGCCAAGGCTGGCGACGTGCTGCTGGCGCGCCAGCTCT
ACAACGAGTTCATGAAGAAGTGGGCCAAGGACCCGCTGGTGGGGGACGCCCACTTCGGCCTTGGTGAGACGTACTTCTCC
GAGTCCAAGTGCCGCGAGGCCCTCTTCGAGTACGGCAAGGTGCTGCAGGACTTCCCGAAGGCGGAGTCCGCGCCGGAGTC
CTACCTGCGCTCGTCGGACTGCTTCGCCCAGCTGAAGATGAAGGAGGAGTCGCGGCTGGCGCTGGAGGAACTCATCAAGA
GCTACCCGAAGTCCGCCGAGGCGAAGACGGCCAAGGAGCGCATCGCCGAGCTGGACAAGAAGGCGGCGCCCGCCAAGAAG
GGCAAGAAGTGA

Upstream 100 bases:

>100_bases
ACCGCCGAGTACCGCCGGGCCCTCCAGGCCCTGGAGTCGGGCCGCTCTCGCCCCGTGGCCTTCTTCCTCAACCCCGACCG
CCTCCGGGTGGCCTGCGCGC

Downstream 100 bases:

>100_bases
GCCCGCGTCCGGTGAAGCTGGCCGCGCTGGCGCTGCTGCTCCTGCTGCCCCTGGTGGCGGGCGCGGCGCCCAAGCAGCTC
GTCCTCCTCTTCACCGGAGA

Product: tol-pal system protein YbgF

Products: NA

Alternate protein names: TPR Domain Protein; L-Pal System YbgF; L-Pal System Protein YbgF; L System Periplasmic Component; TPR Domain-Containing Protein; L-Pal System Protein Ybgf

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MLPSGWSFPSRSGDRPAGQALAGAPTGREKSGRAGRLRLRWRPMRSLALISLLALPGCFYPADRGRALEAKVDRLGTDSA
QIQAELKETREQLVATLPKIDEKVAEVTKALKGLDTAARRKDADIGVQFQKTVEDLAQLRGQVETYLHKITELETALAAQ
DQKLVAMQGEAALKEAEAKKKAEELKRPTDKKEFLALAKAKAKAGDVLLARQLYNEFMKKWAKDPLVGDAHFGLGETYFS
ESKCREALFEYGKVLQDFPKAESAPESYLRSSDCFAQLKMKEESRLALEELIKSYPKSAEAKTAKERIAELDKKAAPAKK
GKK

Sequences:

>Translated_323_residues
MLPSGWSFPSRSGDRPAGQALAGAPTGREKSGRAGRLRLRWRPMRSLALISLLALPGCFYPADRGRALEAKVDRLGTDSA
QIQAELKETREQLVATLPKIDEKVAEVTKALKGLDTAARRKDADIGVQFQKTVEDLAQLRGQVETYLHKITELETALAAQ
DQKLVAMQGEAALKEAEAKKKAEELKRPTDKKEFLALAKAKAKAGDVLLARQLYNEFMKKWAKDPLVGDAHFGLGETYFS
ESKCREALFEYGKVLQDFPKAESAPESYLRSSDCFAQLKMKEESRLALEELIKSYPKSAEAKTAKERIAELDKKAAPAKK
GKK
>Mature_323_residues
MLPSGWSFPSRSGDRPAGQALAGAPTGREKSGRAGRLRLRWRPMRSLALISLLALPGCFYPADRGRALEAKVDRLGTDSA
QIQAELKETREQLVATLPKIDEKVAEVTKALKGLDTAARRKDADIGVQFQKTVEDLAQLRGQVETYLHKITELETALAAQ
DQKLVAMQGEAALKEAEAKKKAEELKRPTDKKEFLALAKAKAKAGDVLLARQLYNEFMKKWAKDPLVGDAHFGLGETYFS
ESKCREALFEYGKVLQDFPKAESAPESYLRSSDCFAQLKMKEESRLALEELIKSYPKSAEAKTAKERIAELDKKAAPAKK
GKK

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35735; Mature: 35735

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSGWSFPSRSGDRPAGQALAGAPTGREKSGRAGRLRLRWRPMRSLALISLLALPGCFY
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCC
PADRGRALEAKVDRLGTDSAQIQAELKETREQLVATLPKIDEKVAEVTKALKGLDTAARR
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDADIGVQFQKTVEDLAQLRGQVETYLHKITELETALAAQDQKLVAMQGEAALKEAEAKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH
KAEELKRPTDKKEFLALAKAKAKAGDVLLARQLYNEFMKKWAKDPLVGDAHFGLGETYFS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
ESKCREALFEYGKVLQDFPKAESAPESYLRSSDCFAQLKMKEESRLALEELIKSYPKSAE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AKTAKERIAELDKKAAPAKKGKK
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLPSGWSFPSRSGDRPAGQALAGAPTGREKSGRAGRLRLRWRPMRSLALISLLALPGCFY
CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCC
PADRGRALEAKVDRLGTDSAQIQAELKETREQLVATLPKIDEKVAEVTKALKGLDTAARR
CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDADIGVQFQKTVEDLAQLRGQVETYLHKITELETALAAQDQKLVAMQGEAALKEAEAKK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHH
KAEELKRPTDKKEFLALAKAKAKAGDVLLARQLYNEFMKKWAKDPLVGDAHFGLGETYFS
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
ESKCREALFEYGKVLQDFPKAESAPESYLRSSDCFAQLKMKEESRLALEELIKSYPKSAE
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AKTAKERIAELDKKAAPAKKGKK
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA