| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758606
Identifier: 108758606
GI number: 108758606
Start: 663275
End: 663889
Strand: Reverse
Name: 108758606
Synonym: MXAN_0579
Alternate gene names: NA
Gene position: 663889-663275 (Counterclockwise)
Preceding gene: 108757498
Following gene: 108760994
Centisome position: 7.26
GC content: 71.87
Gene sequence:
>615_bases ATGAAGCGTCACGCCCCGGCCACGGAACGCAATCGCGAGCCCCTGCTCGCTGTCCTCCGCGAAGTCCTTCCCGCCTCCGG CAGGGTGCTTGAGGTGGCCAGCGGCACCGGCCAACACGCGGCCTGGTTCGCCCGAGCCCTCCCCCACCTCGTCTGGCAGC CCACCGACGTGGACGCGGAGTCGCTGGAGAGCATCGAGGCGTGGCGCACCGCGGAAGGCCCGCCCAACCTGCTGCCGCCG CGCCAGCTCGACGCGAGCGCGGCGTCCTGGCCGGAGACGGCCGCGGACGTCATCCTCAACGTGAACATGATTCACATCGC CCCCTGGACGGCCTGCCAGGGCTTGATGCGGGGCGCGGGCCGGGTGCTGCCTCCCGGCGGGCTGCTCGTCCTGTATGGCC CCTACTTCGTCGAGGGCCGCGAGACGGCCCCCAGCAACCTGGAGTTCGACGCCTCCCTCCGCGCCAGAAACCCGGCGTGG GGCGTGAGGTCGCTGGAGGCCGTCACCGCCGAGGCCGCCCTGCATGGCCTGGAGCGCGAGCGCGTGGTGGACATGCCCAG CAACAACCTCACCGTGGTCTTCCGCAAACCCCGTCCTCAGGTGTCCCCGCACTGA
Upstream 100 bases:
>100_bases GCCCCGCTCCGCCCACTCGCTTCCCGGGGCAGTGCGCAGGTCGTCCACTGGCGGGGGGTGGCGCTCGCCCGGAGCGCGGC GGATGTGCGAAACCCGGGGG
Downstream 100 bases:
>100_bases AGGCCGCCCGACACCGCGCCGGCTGAGTGCGGACCGCCGCACACGCCCGCGGCCCTGGAACCCTTCACGCCCGACACGCA CGCCACTACCCCCATCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKRHAPATERNREPLLAVLREVLPASGRVLEVASGTGQHAAWFARALPHLVWQPTDVDAESLESIEAWRTAEGPPNLLPP RQLDASAASWPETAADVILNVNMIHIAPWTACQGLMRGAGRVLPPGGLLVLYGPYFVEGRETAPSNLEFDASLRARNPAW GVRSLEAVTAEAALHGLERERVVDMPSNNLTVVFRKPRPQVSPH
Sequences:
>Translated_204_residues MKRHAPATERNREPLLAVLREVLPASGRVLEVASGTGQHAAWFARALPHLVWQPTDVDAESLESIEAWRTAEGPPNLLPP RQLDASAASWPETAADVILNVNMIHIAPWTACQGLMRGAGRVLPPGGLLVLYGPYFVEGRETAPSNLEFDASLRARNPAW GVRSLEAVTAEAALHGLERERVVDMPSNNLTVVFRKPRPQVSPH >Mature_204_residues MKRHAPATERNREPLLAVLREVLPASGRVLEVASGTGQHAAWFARALPHLVWQPTDVDAESLESIEAWRTAEGPPNLLPP RQLDASAASWPETAADVILNVNMIHIAPWTACQGLMRGAGRVLPPGGLLVLYGPYFVEGRETAPSNLEFDASLRARNPAW GVRSLEAVTAEAALHGLERERVVDMPSNNLTVVFRKPRPQVSPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=201, Percent_Identity=46.2686567164179, Blast_Score=169, Evalue=1e-42, Organism=Homo sapiens, GI93102391, Length=138, Percent_Identity=47.1014492753623, Blast_Score=107, Evalue=6e-24, Organism=Homo sapiens, GI93102401, Length=132, Percent_Identity=45.4545454545455, Blast_Score=92, Evalue=3e-19, Organism=Homo sapiens, GI93102395, Length=75, Percent_Identity=56, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI93102393, Length=67, Percent_Identity=58.2089552238806, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71998087, Length=201, Percent_Identity=34.3283582089552, Blast_Score=130, Evalue=6e-31, Organism=Drosophila melanogaster, GI28574095, Length=204, Percent_Identity=37.7450980392157, Blast_Score=140, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22261; Mature: 22261
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHAPATERNREPLLAVLREVLPASGRVLEVASGTGQHAAWFARALPHLVWQPTDVDAE CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHH SLESIEAWRTAEGPPNLLPPRQLDASAASWPETAADVILNVNMIHIAPWTACQGLMRGAG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEECEEEEECCHHHHHHHHHCCC RVLPPGGLLVLYGPYFVEGRETAPSNLEFDASLRARNPAWGVRSLEAVTAEAALHGLERE CCCCCCCEEEEECCEEECCCCCCCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHCCCHH RVVDMPSNNLTVVFRKPRPQVSPH HEEECCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MKRHAPATERNREPLLAVLREVLPASGRVLEVASGTGQHAAWFARALPHLVWQPTDVDAE CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCHH SLESIEAWRTAEGPPNLLPPRQLDASAASWPETAADVILNVNMIHIAPWTACQGLMRGAG HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHEEECEEEEECCHHHHHHHHHCCC RVLPPGGLLVLYGPYFVEGRETAPSNLEFDASLRARNPAWGVRSLEAVTAEAALHGLERE CCCCCCCEEEEECCEEECCCCCCCCCCEECCEECCCCCCCCHHHHHHHHHHHHHHCCCHH RVVDMPSNNLTVVFRKPRPQVSPH HEEECCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA