| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is ybeD [C]
Identifier: 108758553
GI number: 108758553
Start: 3735692
End: 3735997
Strand: Direct
Name: ybeD [C]
Synonym: MXAN_3189
Alternate gene names: 108758553
Gene position: 3735692-3735997 (Clockwise)
Preceding gene: 108763203
Following gene: 108758769
Centisome position: 40.87
GC content: 63.07
Gene sequence:
>306_bases ATGACGAAGGAAGACGCAGGAAGCCCTCCCGCCGGCGAAGGGGAGAAGACGCCCCTCATCGAGTACCCCTCCGTCTACAC CTTCAAGGTGATGGGCGCGCAGGGGGCCGGCTTCGTGGAGCATGTCCGTGAGCTGTTCAAGCGGTTCCTGGGCACGGAGC TCTCGCCGGATTCCATTCGCGAGCAACCCAGCAGCAAGGGCAAGTACGTCTCCCTGAGCGTGTCCGTGTACCTGCTGTCC GAGGAGCAGCGGCGCGCCATCTACGATGGGCTCCACAAGGACGAGCGGGTCATCTACTACTTGTAG
Upstream 100 bases:
>100_bases AGAGCGAGAAGATCGCGGCGCACATCACCATGTCCAAGGGTGAGCGCAGCGCCCTGGCCGAGCTCGCCGCCAACCTGCTG TAGCCTCTCTGGTACGAGAC
Downstream 100 bases:
>100_bases GGGCCCGTGGCTGGAAGTCTCTGGAGGAGGCGGGTATATGGGAGCCATGAGCCCGCCTGAGCCCTTCCCGCTGTATCACC CCGCGGATGTCCGGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTKEDAGSPPAGEGEKTPLIEYPSVYTFKVMGAQGAGFVEHVRELFKRFLGTELSPDSIREQPSSKGKYVSLSVSVYLLS EEQRRAIYDGLHKDERVIYYL
Sequences:
>Translated_101_residues MTKEDAGSPPAGEGEKTPLIEYPSVYTFKVMGAQGAGFVEHVRELFKRFLGTELSPDSIREQPSSKGKYVSLSVSVYLLS EEQRRAIYDGLHKDERVIYYL >Mature_100_residues TKEDAGSPPAGEGEKTPLIEYPSVYTFKVMGAQGAGFVEHVRELFKRFLGTELSPDSIREQPSSKGKYVSLSVSVYLLSE EQRRAIYDGLHKDERVIYYL
Specific function: Unknown
COG id: COG2921
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11376; Mature: 11245
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEDAGSPPAGEGEKTPLIEYPSVYTFKVMGAQGAGFVEHVRELFKRFLGTELSPDSIR CCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHH EQPSSKGKYVSLSVSVYLLSEEQRRAIYDGLHKDERVIYYL CCCCCCCCEEEEEEEEEEECCCHHHHHHCCCCCCCEEEEEC >Mature Secondary Structure TKEDAGSPPAGEGEKTPLIEYPSVYTFKVMGAQGAGFVEHVRELFKRFLGTELSPDSIR CCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHH EQPSSKGKYVSLSVSVYLLSEEQRRAIYDGLHKDERVIYYL CCCCCCCCEEEEEEEEEEECCCHHHHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA