Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 108758547

GI number: 108758547

Start: 7080678

End: 7081793

Strand: Direct

Name: yufP [H]

Synonym: MXAN_5713

Alternate gene names: 108758547

Gene position: 7080678-7081793 (Clockwise)

Preceding gene: 108760230

Following gene: 108759119

Centisome position: 77.47

GC content: 74.19

Gene sequence:

>1116_bases
ATGCCTGAGCGCGTGAGACAGATGCTTCCGTCGGTGCTCTCCGTGCTGCTGGCGCTGGGCGTGTGCTGGGCGCTCATCGC
GCTCACCATGGAGCCGGGCACCGCGACGGACGCCTATCTGCAGATGCTGTGGGGTGGCATCGGCAACTGGCCCGCGTGCC
TGGACGGCGCCGCGGCCACCGTCATCACCCGCCCGCTGGGCGAGTCCGCGATGAAGGCCGCGATTCTCACCCTCACCGGC
CTGTCCGTGGCGGTGGCGTTCAAGGTGGGCCTGTTCAACATCGGCGCGCAGGGACAGATGCTGCTGGGCGCGGTGGCCGC
CGCGGTGGTGGGCGCCCAGGTGTCACTGCCGGGCGTGCTGCACGTGCCCGCGGCCCTGCTGGGCGCGGCGCTCGCGGGCG
CGGCGTGGGCGGGCATCGCCGGGCTGCTGCGCATCTACCGGGGCGTGCACGAGGTCATCTCCACCATCATGCTCAACTGG
GTGGCGCTGAGCCTGGTGGACAACTGGCTGGTGGTGGGCCCGCTGCGCGGCGCGGCCGAAGGCGGCCAGTCCATCACCGG
CACCGCCGAAATCCAGGCCACCGCCGTACTGCCCCGGCTGCTGGGGGAAGGCTCGCGGCTCAACCTGGGCTTCCCGCTGG
CGCTCGCCGCGGCGCTGGCGGTGTGGGTGTGGCTGACACGCACGCGCTCCGGCTTCGAGACGCGCGCGGTGGGCCTGGGC
GCCGAGGCCGCGCGCGCCGCGGGCATCCCCGTGGCCCGGCGCATGGGCCTGGCCATGGCGCTCGCGGGGGCCATGGCGGG
GCTGGCGGGCGCGGTGCTGGTGCTGGGGACGGAGGGGCGCTACCCCGGCACACTGGGCGCGCCCTACGGGTTCGACGGCA
TCGCCATCGCGCTCATCGGCAACAACCACCCGCTGGGCGCCACCGTGTCCGCGCTCTTCTTCGGCGTGCTGCGCGCGGGC
GGAACGCGCATGCAACTGCTCGGCGTGCACAAGAGCTTCCCCGAGCTCATCCAGGGCCTCGCGCTGCTCTTCGTCGCCGG
GCGCATGGTCTGGCTGGCGCTGCTGCGCCGGCGGAACGTGGCGCCCGCGGCGTCGGCGGAGGTGCCCCGTGCTTGA

Upstream 100 bases:

>100_bases
TATGTCTTCTTCGAAGGCCGCGTGACGGGCCACTTCCTCCGTCACGAGTTCGACGAACGCGAGCTGGGACGGCGCATGCT
GGGGACCACGGAGCCGGGCC

Downstream 100 bases:

>100_bases
TGTCCTCCACTCACTGCTGTTCTCCACCCTGGACGCGGCACCGGCGCTCGTCTTCGCCGCCCTGGGCGCGGTGCTCTCCG
AGCGCGCGGGCGTGATTGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 370

Protein sequence:

>371_residues
MPERVRQMLPSVLSVLLALGVCWALIALTMEPGTATDAYLQMLWGGIGNWPACLDGAAATVITRPLGESAMKAAILTLTG
LSVAVAFKVGLFNIGAQGQMLLGAVAAAVVGAQVSLPGVLHVPAALLGAALAGAAWAGIAGLLRIYRGVHEVISTIMLNW
VALSLVDNWLVVGPLRGAAEGGQSITGTAEIQATAVLPRLLGEGSRLNLGFPLALAAALAVWVWLTRTRSGFETRAVGLG
AEAARAAGIPVARRMGLAMALAGAMAGLAGAVLVLGTEGRYPGTLGAPYGFDGIAIALIGNNHPLGATVSALFFGVLRAG
GTRMQLLGVHKSFPELIQGLALLFVAGRMVWLALLRRRNVAPAASAEVPRA

Sequences:

>Translated_371_residues
MPERVRQMLPSVLSVLLALGVCWALIALTMEPGTATDAYLQMLWGGIGNWPACLDGAAATVITRPLGESAMKAAILTLTG
LSVAVAFKVGLFNIGAQGQMLLGAVAAAVVGAQVSLPGVLHVPAALLGAALAGAAWAGIAGLLRIYRGVHEVISTIMLNW
VALSLVDNWLVVGPLRGAAEGGQSITGTAEIQATAVLPRLLGEGSRLNLGFPLALAAALAVWVWLTRTRSGFETRAVGLG
AEAARAAGIPVARRMGLAMALAGAMAGLAGAVLVLGTEGRYPGTLGAPYGFDGIAIALIGNNHPLGATVSALFFGVLRAG
GTRMQLLGVHKSFPELIQGLALLFVAGRMVWLALLRRRNVAPAASAEVPRA
>Mature_370_residues
PERVRQMLPSVLSVLLALGVCWALIALTMEPGTATDAYLQMLWGGIGNWPACLDGAAATVITRPLGESAMKAAILTLTGL
SVAVAFKVGLFNIGAQGQMLLGAVAAAVVGAQVSLPGVLHVPAALLGAALAGAAWAGIAGLLRIYRGVHEVISTIMLNWV
ALSLVDNWLVVGPLRGAAEGGQSITGTAEIQATAVLPRLLGEGSRLNLGFPLALAAALAVWVWLTRTRSGFETRAVGLGA
EAARAAGIPVARRMGLAMALAGAMAGLAGAVLVLGTEGRYPGTLGAPYGFDGIAIALIGNNHPLGATVSALFFGVLRAGG
TRMQLLGVHKSFPELIQGLALLFVAGRMVWLALLRRRNVAPAASAEVPRA

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 37873; Mature: 37742

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERVRQMLPSVLSVLLALGVCWALIALTMEPGTATDAYLQMLWGGIGNWPACLDGAAAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHCCHHHH
VITRPLGESAMKAAILTLTGLSVAVAFKVGLFNIGAQGQMLLGAVAAAVVGAQVSLPGVL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHH
HVPAALLGAALAGAAWAGIAGLLRIYRGVHEVISTIMLNWVALSLVDNWLVVGPLRGAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC
GGQSITGTAEIQATAVLPRLLGEGSRLNLGFPLALAAALAVWVWLTRTRSGFETRAVGLG
CCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
AEAARAAGIPVARRMGLAMALAGAMAGLAGAVLVLGTEGRYPGTLGAPYGFDGIAIALIG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
NNHPLGATVSALFFGVLRAGGTRMQLLGVHKSFPELIQGLALLFVAGRMVWLALLRRRNV
CCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APAASAEVPRA
CCCCCCCCCCC
>Mature Secondary Structure 
PERVRQMLPSVLSVLLALGVCWALIALTMEPGTATDAYLQMLWGGIGNWPACLDGAAAT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHCCHHHH
VITRPLGESAMKAAILTLTGLSVAVAFKVGLFNIGAQGQMLLGAVAAAVVGAQVSLPGVL
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHH
HVPAALLGAALAGAAWAGIAGLLRIYRGVHEVISTIMLNWVALSLVDNWLVVGPLRGAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC
GGQSITGTAEIQATAVLPRLLGEGSRLNLGFPLALAAALAVWVWLTRTRSGFETRAVGLG
CCCCCCCCHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
AEAARAAGIPVARRMGLAMALAGAMAGLAGAVLVLGTEGRYPGTLGAPYGFDGIAIALIG
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCEEEEEEE
NNHPLGATVSALFFGVLRAGGTRMQLLGVHKSFPELIQGLALLFVAGRMVWLALLRRRNV
CCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
APAASAEVPRA
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]