| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758544
Identifier: 108758544
GI number: 108758544
Start: 6152404
End: 6153501
Strand: Reverse
Name: 108758544
Synonym: MXAN_4918
Alternate gene names: NA
Gene position: 6153501-6152404 (Counterclockwise)
Preceding gene: 108763988
Following gene: 108762814
Centisome position: 67.33
GC content: 66.85
Gene sequence:
>1098_bases GTGCGCAGAAGACCAGGAATCAGAAAGGCCCCGCCCCGGGACAAAGGTAGTCCCCGTCTTTCGCGACTGCAGCGCCGCTC CCTCATCCGTTGGGGTGAAAGGAGCGGCTGCCCGCTCACCCTGCGGCGGTGCATGGCGGTGGTGGGAGTGTCGCGCGGCG AATCGTGCAGGCAGGTAGCACGTGCTCTGGCGTGCGCCACCTCCACAGTCGTCTCTGCGGTCAATCGCTACCGGACGGGA CGGCGTAAAGCCCTGGTGGACCGCAGGGCGGCCAATGGCGAGGCGAAGGTGGATGAGCGCTTCCTCGCCATTCTCTCGCG CGTGCTGGCGGGTACTCCCGAAGAGGTGGGTTGGTGCCGCCCGACGTGGACACGAGAGTTGCTCGCGCTGGAGATGGAGC GCCGGGGCCTGGCGCGGGTGTCAGTTGCCACCATGGGCCGTGCGCTTGCCACCCTCGGTGCGAGCCTGAAGGCGGCCAAA CCCGTGGTGGGCTGCCCTTGGCCGGGCTGGAAGCGGCGCCGGCGTCTCTTCGAGTTGCGATGCCTGGAAGCATGTGCCCG GTCCGACGAGCCGGTCCTCTATGTGGACGAGGTGGACATCCATCTCAATCCGAAAGTGGGACGCGACTGGTGCCTGCCCG GCCAGCGCCGGGTGGTGCTCACGCCAGGCAACAACAAGAAGCGATACCTGGCCGGCGCCCTGGACTCGAAGACGGGCCGC CTCACCTGGGTGGAAGGCAAGTCGAAGGCCAGCTCACTCTTCATCCAACTGCTTTGGCGCATCGCCGGTGAGTACCCTGG CGCCCCACGAATCCACCTCATCCTGGACAACGCCTCCATCCACAGCAGCCAGAAGACGAGAAAGGCGCTCGAGCGACTCG GCGGCCGGCTTGTCCTCCACTTCCTGCCGCCTTACTGCCCGGACGCCAATCGCATTGAGCGCGTCTGGCTGGACCTCCAC GCCAATGTCACTCGCAACCATCGCTGCCGCACCCTCCAGAAGCTCATGCGGCGCGTCCATGCCTACCTGCACGCTCGCAA CGCCCAGCGGCGTGCCAGTCCTATCCTCCGCAAGGTCCATCTGCGGAGCGCCGCCTGA
Upstream 100 bases:
>100_bases ACCCTCTAAACCACCGCTCGTGATTCTCGATCGGGGTTGGTGAGCGGGCGGGCGCGCGGGGCGATAGGAAGAGGCAGGGG CACATCCCGTTCGGCTCTGT
Downstream 100 bases:
>100_bases GCGCGTGCGAGATTCATGATCGGGCGTTTAGGGGCTGTCCCTGATTAGCGCAGCCAAAGAAGCATGGATGCGACGTGCAG GACGGCGAGGTAGCTCGTCG
Product: IS630 family transposase
Products: NA
Alternate protein names: ISO-IS200 39 kDa protein [H]
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVARALACATSTVVSAVNRYRTG RRKALVDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCRPTWTRELLALEMERRGLARVSVATMGRALATLGASLKAAK PVVGCPWPGWKRRRRLFELRCLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR LTWVEGKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALERLGGRLVLHFLPPYCPDANRIERVWLDLH ANVTRNHRCRTLQKLMRRVHAYLHARNAQRRASPILRKVHLRSAA
Sequences:
>Translated_365_residues MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVARALACATSTVVSAVNRYRTG RRKALVDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCRPTWTRELLALEMERRGLARVSVATMGRALATLGASLKAAK PVVGCPWPGWKRRRRLFELRCLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR LTWVEGKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALERLGGRLVLHFLPPYCPDANRIERVWLDLH ANVTRNHRCRTLQKLMRRVHAYLHARNAQRRASPILRKVHLRSAA >Mature_365_residues MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVARALACATSTVVSAVNRYRTG RRKALVDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCRPTWTRELLALEMERRGLARVSVATMGRALATLGASLKAAK PVVGCPWPGWKRRRRLFELRCLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR LTWVEGKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALERLGGRLVLHFLPPYCPDANRIERVWLDLH ANVTRNHRCRTLQKLMRRVHAYLHARNAQRRASPILRKVHLRSAA
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR001584 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 41339; Mature: 41339
Theoretical pI: Translated: 11.97; Mature: 11.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH RALACATSTVVSAVNRYRTGRRKALVDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC PTWTRELLALEMERRGLARVSVATMGRALATLGASLKAAKPVVGCPWPGWKRRRRLFELR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHH CLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR HHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCC LTWVEGKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALERLGGRLVLH EEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEE FLPPYCPDANRIERVWLDLHANVTRNHRCRTLQKLMRRVHAYLHARNAQRRASPILRKVH ECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LRSAA HHCCC >Mature Secondary Structure MRRRPGIRKAPPRDKGSPRLSRLQRRSLIRWGERSGCPLTLRRCMAVVGVSRGESCRQVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH RALACATSTVVSAVNRYRTGRRKALVDRRAANGEAKVDERFLAILSRVLAGTPEEVGWCR HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCC PTWTRELLALEMERRGLARVSVATMGRALATLGASLKAAKPVVGCPWPGWKRRRRLFELR CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHH CLEACARSDEPVLYVDEVDIHLNPKVGRDWCLPGQRRVVLTPGNNKKRYLAGALDSKTGR HHHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCC LTWVEGKSKASSLFIQLLWRIAGEYPGAPRIHLILDNASIHSSQKTRKALERLGGRLVLH EEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEE FLPPYCPDANRIERVWLDLHANVTRNHRCRTLQKLMRRVHAYLHARNAQRRASPILRKVH ECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH LRSAA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2824781 [H]