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The map label for this gene is bphP [H]

Identifier: 108758513

GI number: 108758513

Start: 392434

End: 394530

Strand: Reverse

Name: bphP [H]

Synonym: MXAN_0336

Alternate gene names: 108758513

Gene position: 394530-392434 (Counterclockwise)

Preceding gene: 108760734

Following gene: 108756947

Centisome position: 4.32

GC content: 71.96

Gene sequence:

>2097_bases
TTGCTAGAGCCACGGCCACCCGTGCCCATCCCCCCCCGCGTCGCACCCTCCCCTCCCGGAGTCTGGGTGCTCGACGACAG
TCCGGTAGAGAGCCAGGCCATCTGCCGCGCGCTGGAGCCCTACTGCAAGGTCACCGGGTTCTTGGACGGAGCCTCGCTGC
TGGAATCCCTGACGCAGGGGCCCGTGCCCGAGGTGCTCGTGCTGGACTGGCACCTGCCCGGCATGTCGGGCCTGGAGGTC
TGCCGCTTCGTCCGGAGCAATCCCGCAACCGAGCACATCCCCGTCCTGCTCATCACCGGGAACACGCGCGCGGAGGACGT
GGTGGAGGGCCTGTCCGCGGGGGCCAACGACTATGTCTTCAAGCCCTTCCGCCCGGTGGAGTTCGCCGCGCGCGTCCAGG
CCCTGGCGCAGTGGGAGCGCAGCCGGCGCAAGACGTTGGAGGATGAACGGGCGCGACGCCGGCGGCTGGAAGGCACGCTG
ACGGAGGTCCAGGCCGCCGAGGAGCGCGCCTGGCGCAGCGAGCTGCGCTTCCGGCTGGCGGCGCGCGCCACGCGGGACGC
GGTGTGGGAGTGGGACCCGCGCACGGGCCTCATGGATTGGACGAGCGGACTGCACGAAGTCTTCGGCTACGCCCCCGGCA
CCATCCGGGACGAGCATCGCTGGTGGGAGGAACGGCTGCACCCGGACGACCGCGCGCGCGTCGTCGCCAGCCTCCAGGCC
ACCGTGGAGGGCCCCGAGCACGAGTGGCAGGACACCTACCGTTTCCAGCGCGGAGACGGCTCCTGGGCCTACGTGGCGGA
CCGCTGCCACATCATCCGCGACGCGCAGGACAACGCGACGCAGGTGGTGGGCGCCATGCAGGACGTCACCGAGCGCCACG
AGGCCGAGGCCGCCCGGGCCCGGCTGCTGGAGCTGGAGCGCGGCGCCCGGGAGGAGTCGGACCGGCAGCGCGCCATGCTG
GCCACGCTCTTCGAACAGGTGCCCGCGCTGCTCGGCGTGCTGAGCGTGCCGGACCAGCGCTGCGTGGTGGCCAACGCGCG
TCTGAGGCAGCGCTTCGGCCAGCGGCAGTTGGTGGGCCGCACGCTCCGCGAGGCCCTGCCGGAGCTGGAGGGCCAGAACG
TCCTCGAGCTGCTGGATACCGTCTTCGCCACTGGCGAGCCCTTCAGCGCGCGGGAGCTGCCCGTGCGCATCGCCCAGGTG
CCCGGCGCCCTTCCGCCGGAAGGCTACTTCGACTTCATGTACCAGCCGATGCGGGACGCCAGCGGACGGCTGGCCGCCGT
CATCCTGTTCGCGGTGGAAGTCACGGACTCCGTCCTGGCGCGGCACAAGGAGTCGGAGCTGGCGCAGCAGATGAAGGCCC
GCGCGGACTTCGAGCGGCAGCTCATCGGCATCGTCAGCCACGACCTGCGCAACCCACTGGGGGCCATCAGCCTGGCGGTG
TCCATGATGCTCCAGCGCGGACTGCTGGATGAGCGGCAGGCGCGTCAGGCGCAGCGCATCCGGAGCTCGGCGGACCGCGC
GACGCGGATGATTCGCGACCTGCTCGACTTCACCCGCGCGCGTCAGGGAACGGGGCTTCCGGTGTACCCGCAGCCCATGG
ACCTGCACGAAGTCGTTCGCACGGTGCTGGACGAGGTGCACGCCGGCTGGCCCGACCGTCACCTGGAGACGGAACGCACC
GGAGATGGCGTGGGCACGTGGGACCCGGACCGGCTTGCGCAGCTCATTGGCAACCTGGTGGGCAACGCCTTGCAGTACAG
CCCGCCCGGCACGCCCGTGCGGGTGACGTCCCGAGGCGATGACGACGGCGTCGTGCTGGAGGTCCACAACCTGGGCCCGG
CGATTCCCCTGGAGCGGCAGCCGCGCATCTTCGAGCCGCTGGAGCGCGCCACGGTGCGCCCGGAGGACCAGGGCCGGCGC
AGCATCGGCCTGGGACTCTACATCGTGCGCAGCATCGTCCTGGCCCACGGCGGCACGGTGGAGGCCCGCTCCCAGGAGGA
GACGGGCACCACCTTCACCGTGCGGCTGCCACGCCATGCGCCCACGGCGCTGCCCCTGCACGAGCTCACGGCGCCCAGCG
CTTGGGACGGCGCTTGA

Upstream 100 bases:

>100_bases
CGTCATTCCCCTCGAAACGCCCGGCTGATCTCCGGCGGACAGAGCGGCAGGCGGTCCAGGGGCCGCTCGCCCTGGCAGAT
TTGACCTGGGAGAGAGGCGG

Downstream 100 bases:

>100_bases
GCGTCGTCAGGCCCAGCCGGTCACAGAACGCTTCGTACACGGCGGGCGGCACGCCCTTCCACGCCAGGTCCTCCAGTGAC
GACGTGCCCGGCAGCGGCGC

Product: sensory box histidine kinase/response regulator

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 698; Mature: 698

Protein sequence:

>698_residues
MLEPRPPVPIPPRVAPSPPGVWVLDDSPVESQAICRALEPYCKVTGFLDGASLLESLTQGPVPEVLVLDWHLPGMSGLEV
CRFVRSNPATEHIPVLLITGNTRAEDVVEGLSAGANDYVFKPFRPVEFAARVQALAQWERSRRKTLEDERARRRRLEGTL
TEVQAAEERAWRSELRFRLAARATRDAVWEWDPRTGLMDWTSGLHEVFGYAPGTIRDEHRWWEERLHPDDRARVVASLQA
TVEGPEHEWQDTYRFQRGDGSWAYVADRCHIIRDAQDNATQVVGAMQDVTERHEAEAARARLLELERGAREESDRQRAML
ATLFEQVPALLGVLSVPDQRCVVANARLRQRFGQRQLVGRTLREALPELEGQNVLELLDTVFATGEPFSARELPVRIAQV
PGALPPEGYFDFMYQPMRDASGRLAAVILFAVEVTDSVLARHKESELAQQMKARADFERQLIGIVSHDLRNPLGAISLAV
SMMLQRGLLDERQARQAQRIRSSADRATRMIRDLLDFTRARQGTGLPVYPQPMDLHEVVRTVLDEVHAGWPDRHLETERT
GDGVGTWDPDRLAQLIGNLVGNALQYSPPGTPVRVTSRGDDDGVVLEVHNLGPAIPLERQPRIFEPLERATVRPEDQGRR
SIGLGLYIVRSIVLAHGGTVEARSQEETGTTFTVRLPRHAPTALPLHELTAPSAWDGA

Sequences:

>Translated_698_residues
MLEPRPPVPIPPRVAPSPPGVWVLDDSPVESQAICRALEPYCKVTGFLDGASLLESLTQGPVPEVLVLDWHLPGMSGLEV
CRFVRSNPATEHIPVLLITGNTRAEDVVEGLSAGANDYVFKPFRPVEFAARVQALAQWERSRRKTLEDERARRRRLEGTL
TEVQAAEERAWRSELRFRLAARATRDAVWEWDPRTGLMDWTSGLHEVFGYAPGTIRDEHRWWEERLHPDDRARVVASLQA
TVEGPEHEWQDTYRFQRGDGSWAYVADRCHIIRDAQDNATQVVGAMQDVTERHEAEAARARLLELERGAREESDRQRAML
ATLFEQVPALLGVLSVPDQRCVVANARLRQRFGQRQLVGRTLREALPELEGQNVLELLDTVFATGEPFSARELPVRIAQV
PGALPPEGYFDFMYQPMRDASGRLAAVILFAVEVTDSVLARHKESELAQQMKARADFERQLIGIVSHDLRNPLGAISLAV
SMMLQRGLLDERQARQAQRIRSSADRATRMIRDLLDFTRARQGTGLPVYPQPMDLHEVVRTVLDEVHAGWPDRHLETERT
GDGVGTWDPDRLAQLIGNLVGNALQYSPPGTPVRVTSRGDDDGVVLEVHNLGPAIPLERQPRIFEPLERATVRPEDQGRR
SIGLGLYIVRSIVLAHGGTVEARSQEETGTTFTVRLPRHAPTALPLHELTAPSAWDGA
>Mature_698_residues
MLEPRPPVPIPPRVAPSPPGVWVLDDSPVESQAICRALEPYCKVTGFLDGASLLESLTQGPVPEVLVLDWHLPGMSGLEV
CRFVRSNPATEHIPVLLITGNTRAEDVVEGLSAGANDYVFKPFRPVEFAARVQALAQWERSRRKTLEDERARRRRLEGTL
TEVQAAEERAWRSELRFRLAARATRDAVWEWDPRTGLMDWTSGLHEVFGYAPGTIRDEHRWWEERLHPDDRARVVASLQA
TVEGPEHEWQDTYRFQRGDGSWAYVADRCHIIRDAQDNATQVVGAMQDVTERHEAEAARARLLELERGAREESDRQRAML
ATLFEQVPALLGVLSVPDQRCVVANARLRQRFGQRQLVGRTLREALPELEGQNVLELLDTVFATGEPFSARELPVRIAQV
PGALPPEGYFDFMYQPMRDASGRLAAVILFAVEVTDSVLARHKESELAQQMKARADFERQLIGIVSHDLRNPLGAISLAV
SMMLQRGLLDERQARQAQRIRSSADRATRMIRDLLDFTRARQGTGLPVYPQPMDLHEVVRTVLDEVHAGWPDRHLETERT
GDGVGTWDPDRLAQLIGNLVGNALQYSPPGTPVRVTSRGDDDGVVLEVHNLGPAIPLERQPRIFEPLERATVRPEDQGRR
SIGLGLYIVRSIVLAHGGTVEARSQEETGTTFTVRLPRHAPTALPLHELTAPSAWDGA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=216, Percent_Identity=31.4814814814815, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=29.718875502008, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1790346, Length=232, Percent_Identity=28.448275862069, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1786783, Length=218, Percent_Identity=30.2752293577982, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=27.027027027027, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1786599, Length=120, Percent_Identity=35.8333333333333, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1787894, Length=235, Percent_Identity=27.6595744680851, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789149, Length=228, Percent_Identity=28.0701754385965, Blast_Score=73, Evalue=6e-14,
Organism=Escherichia coli, GI1790861, Length=225, Percent_Identity=28, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1790551, Length=238, Percent_Identity=29.8319327731092, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789808, Length=239, Percent_Identity=28.8702928870293, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081816, Length=277, Percent_Identity=28.5198555956679, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1788713, Length=228, Percent_Identity=22.3684210526316, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788393, Length=235, Percent_Identity=24.6808510638298, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=26.2008733624454, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI1788394, Length=129, Percent_Identity=29.4573643410853, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI1790860, Length=75, Percent_Identity=46.6666666666667, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 78201; Mature: 78201

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEPRPPVPIPPRVAPSPPGVWVLDDSPVESQAICRALEPYCKVTGFLDGASLLESLTQG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PVPEVLVLDWHLPGMSGLEVCRFVRSNPATEHIPVLLITGNTRAEDVVEGLSAGANDYVF
CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC
KPFRPVEFAARVQALAQWERSRRKTLEDERARRRRLEGTLTEVQAAEERAWRSELRFRLA
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARATRDAVWEWDPRTGLMDWTSGLHEVFGYAPGTIRDEHRWWEERLHPDDRARVVASLQA
HHHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
TVEGPEHEWQDTYRFQRGDGSWAYVADRCHIIRDAQDNATQVVGAMQDVTERHEAEAARA
HHCCCCHHHHHHHHEECCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLLELERGAREESDRQRAMLATLFEQVPALLGVLSVPDQRCVVANARLRQRFGQRQLVGR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
TLREALPELEGQNVLELLDTVFATGEPFSARELPVRIAQVPGALPPEGYFDFMYQPMRDA
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHCC
SGRLAAVILFAVEVTDSVLARHKESELAQQMKARADFERQLIGIVSHDLRNPLGAISLAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SMMLQRGLLDERQARQAQRIRSSADRATRMIRDLLDFTRARQGTGLPVYPQPMDLHEVVR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
TVLDEVHAGWPDRHLETERTGDGVGTWDPDRLAQLIGNLVGNALQYSPPGTPVRVTSRGD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC
DDGVVLEVHNLGPAIPLERQPRIFEPLERATVRPEDQGRRSIGLGLYIVRSIVLAHGGTV
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
EARSQEETGTTFTVRLPRHAPTALPLHELTAPSAWDGA
CCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MLEPRPPVPIPPRVAPSPPGVWVLDDSPVESQAICRALEPYCKVTGFLDGASLLESLTQG
CCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PVPEVLVLDWHLPGMSGLEVCRFVRSNPATEHIPVLLITGNTRAEDVVEGLSAGANDYVF
CCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCC
KPFRPVEFAARVQALAQWERSRRKTLEDERARRRRLEGTLTEVQAAEERAWRSELRFRLA
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARATRDAVWEWDPRTGLMDWTSGLHEVFGYAPGTIRDEHRWWEERLHPDDRARVVASLQA
HHHHHHCCEECCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
TVEGPEHEWQDTYRFQRGDGSWAYVADRCHIIRDAQDNATQVVGAMQDVTERHEAEAARA
HHCCCCHHHHHHHHEECCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
RLLELERGAREESDRQRAMLATLFEQVPALLGVLSVPDQRCVVANARLRQRFGQRQLVGR
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
TLREALPELEGQNVLELLDTVFATGEPFSARELPVRIAQVPGALPPEGYFDFMYQPMRDA
HHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHCC
SGRLAAVILFAVEVTDSVLARHKESELAQQMKARADFERQLIGIVSHDLRNPLGAISLAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
SMMLQRGLLDERQARQAQRIRSSADRATRMIRDLLDFTRARQGTGLPVYPQPMDLHEVVR
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
TVLDEVHAGWPDRHLETERTGDGVGTWDPDRLAQLIGNLVGNALQYSPPGTPVRVTSRGD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEECCCC
DDGVVLEVHNLGPAIPLERQPRIFEPLERATVRPEDQGRRSIGLGLYIVRSIVLAHGGTV
CCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
EARSQEETGTTFTVRLPRHAPTALPLHELTAPSAWDGA
CCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]