Click here to switch to the map view.

The map label for this gene is ycbJ [H]

Identifier: 108758492

GI number: 108758492

Start: 3787453

End: 3788364

Strand: Reverse

Name: ycbJ [H]

Synonym: MXAN_3236

Alternate gene names: 108758492

Gene position: 3788364-3787453 (Counterclockwise)

Preceding gene: 108759453

Following gene: 108759785

Centisome position: 41.45

GC content: 68.97

Gene sequence:

>912_bases
ATGCCCTCCGCCCCGAACGATGCCCCCCAGCTTGTCGAGCTCGCCGGCCACCACGGACTGAAGCTCAAACCCCACACCCT
GTCGGTCAACGAGGCCGGACTGGACTATCGCGTCGTGATGGCGCGCGACCTCGAAGACACCCAGTGGGTCCTCCGCATCC
CGCGGCGTGAAGACGTCTCCGCGAAGCTCCCGGACGAGAAGAAGATTCTCGACTTCATCAATCCCCGGCTCGGCGTGGCG
GTGCCCAGATGGAATGTCGCCCACCGGGACCTCATCGCCTATCCGGCGCTGCCGGGCAGGCCCGGGCTGACGTTGGACCC
CGCCTCGGGCGAGCCCGTGTGGCACTTCGACCGCGAGTCCCCCGTCTATGCCCGCCAGTTCGGCCAGCTCCTGGCCCGGA
TGCATGCCATCGACGTCGAGGATGCCCGGCGAGCGGGCCTCATCGTCGAGACGCCCGACCAGGTCCGCGCCAACTGGGCC
TCCGACATCGCTCGCATCAAGCAGGCCTTCGACGTGGCGCCCGCCCTCCTCCAGCGTTGGGAGCGCTGGCTGGGCGACGA
CTCCTACTGGCCCCGCTTCGTCACGCTGACGCATGGGGAGATGTACCCCGCCCATGTCCTGCTAGCGCCGGACGACACCA
TCACCGGCGTCCTCGATTGGACGACCGCGAAGGTAGGAGACCCGGCGCGCGACTTCGTCTTCCAGAAGATGCTCGGCGTG
GACGCCGTGTTCGAGGCCACCGTGGACGCCTATGTGAAGGCGGGCGGGCAGGTCCCAGACCGCCTGGGCGACCACTGTGA
GGAACTGCTCGCGGCTTCACCCGCCGGCTACGCCCTCTTCGCGCTGCTCACCGGCCTGCCAGAGCACCGGGCGGCCGCCC
AGGCGCAGTTGAACCCCGAAGCGGCCATGTAG

Upstream 100 bases:

>100_bases
TGGCTCGCCGGAGCCCGTCTCCCCGGCGACCATGGTCCCCCCGAAGCCGTGGCCCGCGCGGCCGGCGTGATGACCGTGCA
GGCCTGAAAGGACGCCCTGG

Downstream 100 bases:

>100_bases
GCACAGCGGGCCGGGCGGCGGGCCAGCCCCCCGCCGCTCAGGTTTCACTGTCCAATCACGGCCTGGGGCGCTAGGTAGGG
ACGGCTCGATGGAGCTTCGA

Product: phosphotransferase enzyme family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MPSAPNDAPQLVELAGHHGLKLKPHTLSVNEAGLDYRVVMARDLEDTQWVLRIPRREDVSAKLPDEKKILDFINPRLGVA
VPRWNVAHRDLIAYPALPGRPGLTLDPASGEPVWHFDRESPVYARQFGQLLARMHAIDVEDARRAGLIVETPDQVRANWA
SDIARIKQAFDVAPALLQRWERWLGDDSYWPRFVTLTHGEMYPAHVLLAPDDTITGVLDWTTAKVGDPARDFVFQKMLGV
DAVFEATVDAYVKAGGQVPDRLGDHCEELLAASPAGYALFALLTGLPEHRAAAQAQLNPEAAM

Sequences:

>Translated_303_residues
MPSAPNDAPQLVELAGHHGLKLKPHTLSVNEAGLDYRVVMARDLEDTQWVLRIPRREDVSAKLPDEKKILDFINPRLGVA
VPRWNVAHRDLIAYPALPGRPGLTLDPASGEPVWHFDRESPVYARQFGQLLARMHAIDVEDARRAGLIVETPDQVRANWA
SDIARIKQAFDVAPALLQRWERWLGDDSYWPRFVTLTHGEMYPAHVLLAPDDTITGVLDWTTAKVGDPARDFVFQKMLGV
DAVFEATVDAYVKAGGQVPDRLGDHCEELLAASPAGYALFALLTGLPEHRAAAQAQLNPEAAM
>Mature_302_residues
PSAPNDAPQLVELAGHHGLKLKPHTLSVNEAGLDYRVVMARDLEDTQWVLRIPRREDVSAKLPDEKKILDFINPRLGVAV
PRWNVAHRDLIAYPALPGRPGLTLDPASGEPVWHFDRESPVYARQFGQLLARMHAIDVEDARRAGLIVETPDQVRANWAS
DIARIKQAFDVAPALLQRWERWLGDDSYWPRFVTLTHGEMYPAHVLLAPDDTITGVLDWTTAKVGDPARDFVFQKMLGVD
AVFEATVDAYVKAGGQVPDRLGDHCEELLAASPAGYALFALLTGLPEHRAAAQAQLNPEAAM

Specific function: Unknown

COG id: COG3173

COG function: function code R; Predicted aminoglycoside phosphotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 33562; Mature: 33430

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAPNDAPQLVELAGHHGLKLKPHTLSVNEAGLDYRVVMARDLEDTQWVLRIPRREDVS
CCCCCCCHHHHHHHHCCCCCEECCCEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCC
AKLPDEKKILDFINPRLGVAVPRWNVAHRDLIAYPALPGRPGLTLDPASGEPVWHFDRES
CCCCCHHHHHHHHCCCCCEECCCCCCCHHHHEECCCCCCCCCCEECCCCCCCEEEECCCC
PVYARQFGQLLARMHAIDVEDARRAGLIVETPDQVRANWASDIARIKQAFDVAPALLQRW
CHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERWLGDDSYWPRFVTLTHGEMYPAHVLLAPDDTITGVLDWTTAKVGDPARDFVFQKMLGV
HHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
DAVFEATVDAYVKAGGQVPDRLGDHCEELLAASPAGYALFALLTGLPEHRAAAQAQLNPE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
AAM
CCC
>Mature Secondary Structure 
PSAPNDAPQLVELAGHHGLKLKPHTLSVNEAGLDYRVVMARDLEDTQWVLRIPRREDVS
CCCCCCHHHHHHHHCCCCCEECCCEEECCCCCCCEEEEEECCCCCCEEEEECCCCCCCC
AKLPDEKKILDFINPRLGVAVPRWNVAHRDLIAYPALPGRPGLTLDPASGEPVWHFDRES
CCCCCHHHHHHHHCCCCCEECCCCCCCHHHHEECCCCCCCCCCEECCCCCCCEEEECCCC
PVYARQFGQLLARMHAIDVEDARRAGLIVETPDQVRANWASDIARIKQAFDVAPALLQRW
CHHHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERWLGDDSYWPRFVTLTHGEMYPAHVLLAPDDTITGVLDWTTAKVGDPARDFVFQKMLGV
HHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
DAVFEATVDAYVKAGGQVPDRLGDHCEELLAASPAGYALFALLTGLPEHRAAAQAQLNPE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCC
AAM
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 7704254 [H]