| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108758430
Identifier: 108758430
GI number: 108758430
Start: 1962661
End: 1963029
Strand: Direct
Name: 108758430
Synonym: MXAN_1659
Alternate gene names: NA
Gene position: 1962661-1963029 (Clockwise)
Preceding gene: 108763208
Following gene: 108761499
Centisome position: 21.47
GC content: 65.31
Gene sequence:
>369_bases ATGCCCCCCGAGCGAATCAACCGCGGTGATGTGTTCTGGGTGGAGCCCGACGACTCACGAGGCCCGGTCCCCAGCTATTC GCACCCCCACGTGGTGGTTCAGGACGACGTCTTCAATCACTCACGCATCACGACGGTGGTCGTGTGTGCGCTGACGTCGA ACCTGCACCGGGCCAGCGAGCCGGGGAACGTGCTGCTCGAAGTGGGAGAGGGAAACCTCCCCAAGCAGAGCGTCGTCGTC GTGTCGCAGGTGTCCTCGGTCGACAAGGCGCGTCTGGGAGAGCGAATCGGGGCGCTGTCGGACGCGCGGGTGGAACAGAT TCTTGCCGGCCTGCGCTTCCAGCAGGTGTCGTTCTTCGCGAGGCCGTGA
Upstream 100 bases:
>100_bases TCCTTGAGGAACTGATGGCGGATGCCTTGGAGGAAGCCTCCGCGCTCGCTAAGAAGGCCGGGCCGCCAGACCGGAGGCAG GCACAGGAGACCCCGAGGGC
Downstream 100 bases:
>100_bases AGCCCCGGTGAGTGGGCTTGGAAACCCCTCGTGATTTCGAGGGGTTCTGTCGTTTTTCGAAAAAGAAGTGCCTGCCGTGA AGGGATTTCTTCCTCGCGCC
Product: PemK family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MPPERINRGDVFWVEPDDSRGPVPSYSHPHVVVQDDVFNHSRITTVVVCALTSNLHRASEPGNVLLEVGEGNLPKQSVVV VSQVSSVDKARLGERIGALSDARVEQILAGLRFQQVSFFARP
Sequences:
>Translated_122_residues MPPERINRGDVFWVEPDDSRGPVPSYSHPHVVVQDDVFNHSRITTVVVCALTSNLHRASEPGNVLLEVGEGNLPKQSVVV VSQVSSVDKARLGERIGALSDARVEQILAGLRFQQVSFFARP >Mature_121_residues PPERINRGDVFWVEPDDSRGPVPSYSHPHVVVQDDVFNHSRITTVVVCALTSNLHRASEPGNVLLEVGEGNLPKQSVVVV SQVSSVDKARLGERIGALSDARVEQILAGLRFQQVSFFARP
Specific function: Unknown
COG id: COG2337
COG function: function code T; Growth inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PemK/MazF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003477 - InterPro: IPR011067 [H]
Pfam domain/function: PF02452 PemK [H]
EC number: NA
Molecular weight: Translated: 13383; Mature: 13252
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPERINRGDVFWVEPDDSRGPVPSYSHPHVVVQDDVFNHSRITTVVVCALTSNLHRASE CCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC PGNVLLEVGEGNLPKQSVVVVSQVSSVDKARLGERIGALSDARVEQILAGLRFQQVSFFA CCCEEEEECCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHEEEC RP CC >Mature Secondary Structure PPERINRGDVFWVEPDDSRGPVPSYSHPHVVVQDDVFNHSRITTVVVCALTSNLHRASE CCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC PGNVLLEVGEGNLPKQSVVVVSQVSSVDKARLGERIGALSDARVEQILAGLRFQQVSFFA CCCEEEEECCCCCCHHHEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHEEEC RP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]