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The map label for this gene is ybbK [C]

Identifier: 108758410

GI number: 108758410

Start: 4852407

End: 4853513

Strand: Direct

Name: ybbK [C]

Synonym: MXAN_3984

Alternate gene names: 108758410

Gene position: 4852407-4853513 (Clockwise)

Preceding gene: 108757890

Following gene: 108760823

Centisome position: 53.09

GC content: 68.2

Gene sequence:

>1107_bases
ATGGAAATCGTGACGATTTTCGGCATCTTCGCGGTCATCCTGGTGGGCATCGCCGCCACCGGCATCCGCATCGTTCCGCA
GGCCAAGGTCATGGTCGTGGAGCGGCTGGGCAAGTTCTACAAGACCGCCAGCAGCGGCCTCAATTACCTCATCCCCTTCG
TGGATGCCCCCCGCGCCATCGAGATGCGCACGGGCAACCGCTTCATGCGCAGCAACCTCGTGGACCTGCGCGAACAGGTC
ATGGGCTTCGACACCGTCCAGGTCATCACCCACGACAACGTCAACATGGAGGTCGGCTCGGTCATCTACTACCAGATCGT
CGAGCCCGCGAAGGCGCTCTACCAGGTGGAGAACCTCGCGCTCGCCATCGAGCAGCTCACGATGACGAACCTGCGCAACA
TCATGGGCGGGCTGACGCTGGACCAGACGCTCACCAGCCGCGAGACGGTCAACACCAAGCTGCGCATCGTGCTGGACGAG
GCCACCGAGAAGTGGGGCGTCAAGGTGACGCGCGTGGAGCTGCGCGAAATCGAGCCGCCCCAGGCCATCAAGGCCGCCAT
GGCCAAGCAGATGACCGCCGAGCGTGAGCGCCGCGCCGAGGTCACCAAGGCCGAGGGCGACAAGGCCGCCGCCATCCTCC
AGGCCGAGGGCGAGAAGATCTCCCGCATCCTCCGCGCCGAGGCCGAACGCGACGCGGAGATTGCCCGCGCCGAAGGCCAC
AAGCGCGCCACCATGCTGCAGGCGGAAGGCAAGGCCGAGGCCACCCGGCTCGTCTTCGAGGCCATCCACAACGGCCGCGC
CACTCCCGAGGTGCTCGCGCTGCGCTACATGGAGACCCTCCAGGAGCTGGGCAAGGGCGACAACAAGATTTTCGTCCCCT
ACGAGGCCACCGCCACGTTGGGCGCCGTCGCCACCCTCAAGGAGGTCTTCGCCCAGACTGGGGATGCCGCAAAGCCCGCC
CCGGCGCCGGCCCGCTCCGCCGCGAGCCTGAGCGGCCAGGCCATTGCCCGGAACACGGTGGTCCCCGAGCACGCCACCCT
CCCCGGCGGCACGCCCGCCGTGGCCCCTCGGCGTCCGCGGCCCGCCCTGGACACGCAGGACGACTGA

Upstream 100 bases:

>100_bases
TCGTCACGGTGGAGCAGGTGGAAGGTCTCAAACTCTGGGTGCGCCGACCGACGGCGTCGTTGCCGGTTCCCTCGGGGGAC
CCGAGGAAGGAGTAGGCGGG

Downstream 100 bases:

>100_bases
GCCCAGGCGTAGGCAGCCCCCGCGGGAGGAAGACGCCTCCCGCGGGACACTGAGCAGGGCTCGCGTTCGCGCATCCAGGA
CGACGGTCCATTGCGCCACC

Product: SPFH domain-containing protein/band 7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MEIVTIFGIFAVILVGIAATGIRIVPQAKVMVVERLGKFYKTASSGLNYLIPFVDAPRAIEMRTGNRFMRSNLVDLREQV
MGFDTVQVITHDNVNMEVGSVIYYQIVEPAKALYQVENLALAIEQLTMTNLRNIMGGLTLDQTLTSRETVNTKLRIVLDE
ATEKWGVKVTRVELREIEPPQAIKAAMAKQMTAERERRAEVTKAEGDKAAAILQAEGEKISRILRAEAERDAEIARAEGH
KRATMLQAEGKAEATRLVFEAIHNGRATPEVLALRYMETLQELGKGDNKIFVPYEATATLGAVATLKEVFAQTGDAAKPA
PAPARSAASLSGQAIARNTVVPEHATLPGGTPAVAPRRPRPALDTQDD

Sequences:

>Translated_368_residues
MEIVTIFGIFAVILVGIAATGIRIVPQAKVMVVERLGKFYKTASSGLNYLIPFVDAPRAIEMRTGNRFMRSNLVDLREQV
MGFDTVQVITHDNVNMEVGSVIYYQIVEPAKALYQVENLALAIEQLTMTNLRNIMGGLTLDQTLTSRETVNTKLRIVLDE
ATEKWGVKVTRVELREIEPPQAIKAAMAKQMTAERERRAEVTKAEGDKAAAILQAEGEKISRILRAEAERDAEIARAEGH
KRATMLQAEGKAEATRLVFEAIHNGRATPEVLALRYMETLQELGKGDNKIFVPYEATATLGAVATLKEVFAQTGDAAKPA
PAPARSAASLSGQAIARNTVVPEHATLPGGTPAVAPRRPRPALDTQDD
>Mature_368_residues
MEIVTIFGIFAVILVGIAATGIRIVPQAKVMVVERLGKFYKTASSGLNYLIPFVDAPRAIEMRTGNRFMRSNLVDLREQV
MGFDTVQVITHDNVNMEVGSVIYYQIVEPAKALYQVENLALAIEQLTMTNLRNIMGGLTLDQTLTSRETVNTKLRIVLDE
ATEKWGVKVTRVELREIEPPQAIKAAMAKQMTAERERRAEVTKAEGDKAAAILQAEGEKISRILRAEAERDAEIARAEGH
KRATMLQAEGKAEATRLVFEAIHNGRATPEVLALRYMETLQELGKGDNKIFVPYEATATLGAVATLKEVFAQTGDAAKPA
PAPARSAASLSGQAIARNTVVPEHATLPGGTPAVAPRRPRPALDTQDD

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=318, Percent_Identity=33.3333333333333, Blast_Score=160, Evalue=1e-39,
Organism=Homo sapiens, GI21686995, Length=192, Percent_Identity=32.8125, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI221316744, Length=192, Percent_Identity=32.8125, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI38016911, Length=208, Percent_Identity=30.7692307692308, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI7657615, Length=182, Percent_Identity=23.0769230769231, Blast_Score=76, Evalue=6e-14,
Organism=Escherichia coli, GI1786697, Length=316, Percent_Identity=37.9746835443038, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1790616, Length=278, Percent_Identity=26.2589928057554, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32564147, Length=280, Percent_Identity=33.5714285714286, Blast_Score=155, Evalue=4e-38,
Organism=Caenorhabditis elegans, GI17569493, Length=208, Percent_Identity=32.2115384615385, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI193209764, Length=208, Percent_Identity=32.2115384615385, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17569497, Length=302, Percent_Identity=25.4966887417219, Blast_Score=107, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI25153583, Length=299, Percent_Identity=27.7591973244147, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI71987612, Length=299, Percent_Identity=27.7591973244147, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71987621, Length=299, Percent_Identity=27.7591973244147, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71989955, Length=194, Percent_Identity=31.4432989690722, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI71989948, Length=194, Percent_Identity=31.4432989690722, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17569499, Length=216, Percent_Identity=29.6296296296296, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI193210507, Length=218, Percent_Identity=30.7339449541284, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17570161, Length=218, Percent_Identity=30.7339449541284, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32566490, Length=192, Percent_Identity=31.7708333333333, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17570459, Length=224, Percent_Identity=28.125, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45550506, Length=298, Percent_Identity=30.8724832214765, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI21356845, Length=214, Percent_Identity=29.9065420560748, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI18860517, Length=223, Percent_Identity=32.7354260089686, Blast_Score=106, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281361633, Length=205, Percent_Identity=30.7317073170732, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI45556022, Length=302, Percent_Identity=28.8079470198675, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281361631, Length=205, Percent_Identity=30.7317073170732, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28573263, Length=223, Percent_Identity=30.9417040358744, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24657857, Length=211, Percent_Identity=30.3317535545024, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281365664, Length=192, Percent_Identity=31.7708333333333, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI62484448, Length=192, Percent_Identity=31.7708333333333, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI62484274, Length=192, Percent_Identity=31.7708333333333, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI281361635, Length=154, Percent_Identity=32.4675324675325, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 40153; Mature: 40153

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIVTIFGIFAVILVGIAATGIRIVPQAKVMVVERLGKFYKTASSGLNYLIPFVDAPRAI
CCEEHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEE
EMRTGNRFMRSNLVDLREQVMGFDTVQVITHDNVNMEVGSVIYYQIVEPAKALYQVENLA
EECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCEEEEHHHHHHHHHHHHHHHH
LAIEQLTMTNLRNIMGGLTLDQTLTSRETVNTKLRIVLDEATEKWGVKVTRVELREIEPP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCHHHHCCEEEEEEHHCCCCH
QAIKAAMAKQMTAERERRAEVTKAEGDKAAAILQAEGEKISRILRAEAERDAEIARAEGH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
KRATMLQAEGKAEATRLVFEAIHNGRATPEVLALRYMETLQELGKGDNKIFVPYEATATL
CHHHEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
GAVATLKEVFAQTGDAAKPAPAPARSAASLSGQAIARNTVVPEHATLPGGTPAVAPRRPR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PALDTQDD
CCCCCCCC
>Mature Secondary Structure
MEIVTIFGIFAVILVGIAATGIRIVPQAKVMVVERLGKFYKTASSGLNYLIPFVDAPRAI
CCEEHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEE
EMRTGNRFMRSNLVDLREQVMGFDTVQVITHDNVNMEVGSVIYYQIVEPAKALYQVENLA
EECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCEEEEHHHHHHHHHHHHHHHH
LAIEQLTMTNLRNIMGGLTLDQTLTSRETVNTKLRIVLDEATEKWGVKVTRVELREIEPP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCHHHHCCEEEEEEHHCCCCH
QAIKAAMAKQMTAERERRAEVTKAEGDKAAAILQAEGEKISRILRAEAERDAEIARAEGH
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCC
KRATMLQAEGKAEATRLVFEAIHNGRATPEVLALRYMETLQELGKGDNKIFVPYEATATL
CHHHEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHH
GAVATLKEVFAQTGDAAKPAPAPARSAASLSGQAIARNTVVPEHATLPGGTPAVAPRRPR
HHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
PALDTQDD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]