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The map label for this gene is grsT [H]

Identifier: 108758382

GI number: 108758382

Start: 5254048

End: 5254836

Strand: Direct

Name: grsT [H]

Synonym: MXAN_4290

Alternate gene names: 108758382

Gene position: 5254048-5254836 (Clockwise)

Preceding gene: 108757687

Following gene: 108757798

Centisome position: 57.49

GC content: 67.43

Gene sequence:

>789_bases
ATGAATCCTGAATCCAGCATCGCGGCGGCCGAGTCCCCCTGGCTCGTCCGCCGCAAACCCCAGGCGTCGCCTCGTCTCCG
GCTGTTCTGCTTCCCCTACGCGGGAGCCGGCAGCCTTCCCTACTTCCGTTGGCCTGACCTGCTCCCCGAGGCGGACATCG
AGGTGTGCGCAGTGCAGCCTCCCGGCCGGGAGAACCGCCTGCATGAGCCGTCCGTGGAGGAGCTCCCACAACTGCTGGAC
GCGCTCGTGCGGGAGCTGTCGCCCCTCTTCGATGGCCCCTTTGCCTTCTTCGGCCACAGCCTGGGCGCGCTCATCGCCTT
CGAGCTGACGCGCGAACTCCGCCGCCGGGGCCTTCCGCTGCCTGGCACCCTGCTCGTCTCCGGCTCCGAGGCGCCCTCCC
GGCGCAGTGGACTTCCCCCACTGAGCGGCCTGCGGCGAGACGACTTCATCCGCGAGCTGTCCGCTCGCTACGACGGCATT
CCGCAGCAGGTCCTGGCGCAGCCGGAGATCCTGGACCTCATCCTCCCCATCCTGCGCGCCGACCTGAAGATTTCAGAGCG
CTACACCTACCAGGAGGAGCCTCCGCTTCCAGTGCGGCTGTGTGCCTTCGGTGGCACTCGCGACCCTCGCGTCTCGGAAG
CCGCGCTCGACACGTGGCGACTGCAAACACAGCAGTCCTTCTCGATGAAGATGTTTCCAGGCGGCCACTTCTTTCTCAAC
GAGCTGACGGCCCAGGTGGTCCAGGCCGTCCATGCCGAACTCGCAGTCGGAGCAACCCCAGCACCATGA

Upstream 100 bases:

>100_bases
CTGGCTCGCGTTGGGAATCGAGGCCCTCGCGGCGACGGCCCGCGGGGTCCGCGACGGCTGCCGGAAATAGAACCTCTGTC
CCTCACCTCATCCATCATCA

Downstream 100 bases:

>100_bases
ACAGAGACGACCTGCTCGATGTCCTGACCCGCTATGTCGCGAATGAACTCCTGGACGGGGACGCGGAGGACCTCGATTCC
TCCACGCCCCTCTTGGAGCT

Product: putative thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNPESSIAAAESPWLVRRKPQASPRLRLFCFPYAGAGSLPYFRWPDLLPEADIEVCAVQPPGRENRLHEPSVEELPQLLD
ALVRELSPLFDGPFAFFGHSLGALIAFELTRELRRRGLPLPGTLLVSGSEAPSRRSGLPPLSGLRRDDFIRELSARYDGI
PQQVLAQPEILDLILPILRADLKISERYTYQEEPPLPVRLCAFGGTRDPRVSEAALDTWRLQTQQSFSMKMFPGGHFFLN
ELTAQVVQAVHAELAVGATPAP

Sequences:

>Translated_262_residues
MNPESSIAAAESPWLVRRKPQASPRLRLFCFPYAGAGSLPYFRWPDLLPEADIEVCAVQPPGRENRLHEPSVEELPQLLD
ALVRELSPLFDGPFAFFGHSLGALIAFELTRELRRRGLPLPGTLLVSGSEAPSRRSGLPPLSGLRRDDFIRELSARYDGI
PQQVLAQPEILDLILPILRADLKISERYTYQEEPPLPVRLCAFGGTRDPRVSEAALDTWRLQTQQSFSMKMFPGGHFFLN
ELTAQVVQAVHAELAVGATPAP
>Mature_262_residues
MNPESSIAAAESPWLVRRKPQASPRLRLFCFPYAGAGSLPYFRWPDLLPEADIEVCAVQPPGRENRLHEPSVEELPQLLD
ALVRELSPLFDGPFAFFGHSLGALIAFELTRELRRRGLPLPGTLLVSGSEAPSRRSGLPPLSGLRRDDFIRELSARYDGI
PQQVLAQPEILDLILPILRADLKISERYTYQEEPPLPVRLCAFGGTRDPRVSEAALDTWRLQTQQSFSMKMFPGGHFFLN
ELTAQVVQAVHAELAVGATPAP

Specific function: Probable thioesterase involved in the biosynthesis of gramicidin S [H]

COG id: COG3208

COG function: function code Q; Predicted thioesterase involved in non-ribosomal peptide biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase family [H]

Homologues:

Organism=Homo sapiens, GI89257335, Length=230, Percent_Identity=31.7391304347826, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI8922871, Length=278, Percent_Identity=26.978417266187, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012223
- InterPro:   IPR001031 [H]

Pfam domain/function: PF00975 Thioesterase [H]

EC number: NA

Molecular weight: Translated: 29113; Mature: 29113

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPESSIAAAESPWLVRRKPQASPRLRLFCFPYAGAGSLPYFRWPDLLPEADIEVCAVQP
CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECC
PGRENRLHEPSVEELPQLLDALVRELSPLFDGPFAFFGHSLGALIAFELTRELRRRGLPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGTLLVSGSEAPSRRSGLPPLSGLRRDDFIRELSARYDGIPQQVLAQPEILDLILPILRA
CCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHH
DLKISERYTYQEEPPLPVRLCAFGGTRDPRVSEAALDTWRLQTQQSFSMKMFPGGHFFLN
CCHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHH
ELTAQVVQAVHAELAVGATPAP
HHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNPESSIAAAESPWLVRRKPQASPRLRLFCFPYAGAGSLPYFRWPDLLPEADIEVCAVQP
CCCCCCCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECC
PGRENRLHEPSVEELPQLLDALVRELSPLFDGPFAFFGHSLGALIAFELTRELRRRGLPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PGTLLVSGSEAPSRRSGLPPLSGLRRDDFIRELSARYDGIPQQVLAQPEILDLILPILRA
CCEEEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHH
DLKISERYTYQEEPPLPVRLCAFGGTRDPRVSEAALDTWRLQTQQSFSMKMFPGGHFFLN
CCHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHH
ELTAQVVQAVHAELAVGATPAP
HHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2477357; 7512553 [H]